HHsearch alignment for GI: 254780922 and conserved domain: COG0836
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane].
Probab=99.84 E-value=9.5e-22 Score=156.62 Aligned_cols=232 Identities=22% Similarity=0.304 Sum_probs=145.1
Q ss_pred CEEEEECCCCCCCCCHHHCC-CCCCEEEEC-CEEHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 90799248887455334438-982222478-37479999999997-89868999977765643111222222221111--
Q gi|254780922|r 1 MKGIVLAGGSGTRLRPLTDL-LSKQMLPIY-NKPMIYYPVSTLMD-AGIREILIISTPRDLPVLKEFLGSGEKWGVQF-- 75 (292)
Q Consensus 1 MkaiIlAaG~GtRl~P~T~~-~pK~Llpi~-gkplI~~~l~~l~~-~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i-- 75 (292)
T Consensus 2 ~~pvIlaGG~GsRLWPLSR~~~PKQFl~L~~~~Sllq~T~~R~~~l~~~~~~~vVtne~~~f~v~eql---~e~~~~~~~ 78 (333)
T COG0836 2 MIPVILAGGSGSRLWPLSRKDYPKQFLKLFGDLSLLQQTVKRLAFLGDIEEPLVVTNEKYRFIVKEQL---PEIDIENAA 78 (333)
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHH---HHHHHCCCC
T ss_conf 12599707876536876754377230341799718999999875147856609995779999999986---641012566
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC---CCCCCEEECCCCCCCC--CCCCHHHHHCCCHH--HHHCCCCCCCCC-CCCCCCC
Q ss_conf 22233332244685210111233---5675213214432111--10000111000001--110012222100-0122212
Q gi|254780922|r 76 SYIEQLVPAGLAQSYILGAEFIG---DSSSVLILGDNVFYGS--DISDIFHKARARRN--SATVVGCHVQNP-QRYGVVE 147 (292)
Q Consensus 76 ~y~~q~~p~Gta~Ai~~a~~~i~---~~~~~lilgDni~~~~--~l~~~l~~~~~~~~--~~ti~~~~v~~p-~~yGvv~ 147 (292)
T Consensus 79 ~illEP~gRnTApAIA~aa~~~~~~~~d~~~lVlpsDH~I~d~~af~~av~~A~~~A~~g~lVTfGI~Pt~PeTGYGYIe 158 (333)
T COG0836 79 GIILEPEGRNTAPAIALAALSATAEGGDALVLVLPSDHVIADEEAFLNAVKKAEKAAEEGGIVTFGIPPTRPETGYGYIE 158 (333)
T ss_pred CEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEE
T ss_conf 06854578774999999999998758983899944755655689999999999999971987998327898866741463
Q ss_pred CCC------CCCHHHCCCCCCC--CCC------CCCHHHHHHHHHHHH-HHHHHCCCC-----------C---------C
Q ss_conf 222------1000100133333--222------222024554100022-432200467-----------5---------3
Q gi|254780922|r 148 VDS------SNQAISIEEKPNN--PKS------SFAVTGIYFYDQEVV-NIARNIRPS-----------A---------R 192 (292)
Q Consensus 148 ~d~------~~~i~~i~EKP~~--~~s------n~a~~GiY~f~~~i~-~~~~~l~~s-----------~---------r 192 (292)
T Consensus 159 ~G~~~~~~~~~~V~~FvEKPd~etA~~yv~sG~y~WNSGmF~Fra~~~l~e~~~~~P~i~~~~~~~~~~~~d~~~~~l~~ 238 (333)
T COG0836 159 TGESIAENGVYKVDRFVEKPDLETAKKYVESGEYLWNSGMFLFRASVFLEELKKHQPDIYCAAEKAFEAAVDENSVRLDN 238 (333)
T ss_pred CCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCEEEECCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCH
T ss_conf 28624567825755531388789999999739657632316888899999998609099999999874403342210048
Q ss_pred CCCCC-CC-CCCHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHH
Q ss_conf 33333-34-320000013204631354125632784577999999
Q gi|254780922|r 193 GELEI-TD-VNSYYLDKGLLAVEFLREGSAWFDAGTPESLLDTAV 235 (292)
Q Consensus 193 gE~ei-tD-~~~~~l~~~~~~~~~~~~g~~W~D~Gt~e~l~~As~ 235 (292)
T Consensus 239 e~f~~~p~iSIDYAiMEkt~~~aVVp~~f~WsDlGsW~Al~~~~~ 283 (333)
T COG0836 239 EAYEEIPAISIDYAIMEKTSKAAVVPADFGWSDLGSWHALWEVLD 283 (333)
T ss_pred HHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHH
T ss_conf 887448312203787741166489956788565567899998751