HHsearch alignment for GI: 254780922 and conserved domain: COG1209
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=583.58 Aligned_cols=284 Identities=49% Similarity=0.907 Sum_probs=278.9
Q ss_pred CEEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 90799248887455334438982222478374799999999978986899997776564311122222222111122233
Q gi|254780922|r 1 MKGIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGEKWGVQFSYIEQ 80 (292)
Q Consensus 1 MkaiIlAaG~GtRl~P~T~~~pK~Llpi~gkplI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~~q 80 (292)
T Consensus 1 mKgiILAgG~GTRL~PlT~~~~KqLlpV~~KPmi~y~l~~L~~aGI~dI~II~~~~~~~~~~~llGdgs~~gv~itY~~Q 80 (286)
T COG1209 1 MKGVILAGGSGTRLRPLTRVVPKQLLPVYDKPMIYYPLETLMLAGIRDILIVVGPEDKPTFKELLGDGSDFGVDITYAVQ 80 (286)
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEC
T ss_conf 97279637675443323136775332116862158579999975985699996688505666333671003863699965
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
Q ss_conf 33224468521011123356752132144321111000011100000111001222210001222122221000100133
Q gi|254780922|r 81 LVPAGLAQSYILGAEFIGDSSSVLILGDNVFYGSDISDIFHKARARRNSATVVGCHVQNPQRYGVVEVDSSNQAISIEEK 160 (292)
Q Consensus 81 ~~p~Gta~Ai~~a~~~i~~~~~~lilgDni~~~~~l~~~l~~~~~~~~~~ti~~~~v~~p~~yGvv~~d~~~~i~~i~EK 160 (292)
T Consensus 81 ~~p~GlA~Av~~a~~fv~~~~f~l~LGDNi~~~-~l~~~~~~~~~~~~ga~i~~~~V~dP~rfGV~e~d~~~~v~~l~EK 159 (286)
T COG1209 81 PEPDGLAHAVLIAEDFVGDDDFVLYLGDNIFQD-GLSELLEHFAEEGSGATILLYEVDDPSRYGVVEFDEDGKVIGLEEK 159 (286)
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEECCCEECC-CHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEC
T ss_conf 898768999998886458986599926844105-7799999985248994899998489530448998689968776788
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 33322222202455410002243220046753333333432000001320463135412563278457799999999998
Q gi|254780922|r 161 PNNPKSSFAVTGIYFYDQEVVNIARNIRPSARGELEITDVNSYYLDKGLLAVEFLREGSAWFDAGTPESLLDTAVFVRNI 240 (292)
Q Consensus 161 P~~~~sn~a~~GiY~f~~~i~~~~~~l~~s~rgE~eitD~~~~~l~~~~~~~~~~~~g~~W~D~Gt~e~l~~As~~i~~~ 240 (292)
T Consensus 160 P~~P~SNlAvtGlY~~d~~Vf~~~~~ikPS~RGElEITd~i~~~i~~G~~~~~~~~~G-~WlDtGt~~slleA~~~i~~~ 238 (286)
T COG1209 160 PKEPKSNLAVTGLYFYDPSVFEAIKQIKPSARGELEITDAIDLYIEKGYLVVAILIRG-WWLDTGTPESLLEANNFVRTV 238 (286)
T ss_pred CCCCCCCEEEEEEEEECHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCEEEEEECCC-EEEECCCHHHHHHHHHHHHHH
T ss_conf 9999876268899970858999987189887785675288999997696888987151-688638701289999999888
Q ss_pred HHHCCCEEEEHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 88809866209999988689898999998864258848999999986
Q gi|254780922|r 241 ENRLGLYVACPEEIAYRHDFINESQFFQLIDHFGNSPYGLYLRQVVE 287 (292)
Q Consensus 241 e~~~g~~i~~~ee~a~~~~~i~~~~l~~~~~~~~~~~y~~~l~~~~~ 287 (292)
T Consensus 239 ~~~~G~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~G~y~~~~~~ 284 (286)
T COG1209 239 SKRQGFKIACPEEIAW-NGWIDGPGLIGLASQLEKSGYGQYLLELLR 284 (286)
T ss_pred HHHCCCEEECHHHEEE-EEEEECHHHHCCCCCHHHCCCCHHHHHHHC
T ss_conf 8634877727037888-248835686232420443673066656533