>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 The bacterial ispD protein catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate.; GO: 0008299 isoprenoid biosynthetic process.

Probab=99.53 E-value=1.1e-14 Score=112.42 Aligned_cols=209 Identities=18% Similarity=0.269 Sum_probs=136.7 Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 799248887455334438982222478374799999999978-9868999977765643111222222221111222333 Q gi|254780922|r 3 GIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDA-GIREILIISTPRDLPVLKEFLGSGEKWGVQFSYIEQL 81 (292) Q Consensus 3 aiIlAaG~GtRl~P~T~~~pK~Llpi~gkplI~~~l~~l~~~-Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~~q~ 81 (292) T Consensus 2 avi~AAG~G~R~~---~~~pKQy~~l~G~Pll~h~~~~~~~~~~~~~vvVV~~~~~~~~~~~~~~~~~~~-~~~~~v~-- 75 (226) T TIGR00453 2 AVIPAAGRGTRMG---SGVPKQYLELAGRPLLEHTLDAFLAHPAIDEVVVVVSPDDTEFFQKALAARAKF-KVVKIVA-- 75 (226) T ss_pred EEEEECCCCEECC---CCCCEEEEEECCEEEHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCC-CCCEEEC-- T ss_conf 6873167111336---798702665188022177899986323206468983674158888863256578-6115846-- Q ss_pred CCCC--CCCCCCCCCCCC---CCCCCCEEECC--CCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCH Q ss_conf 3224--468521011123---35675213214--4321111000011100000111001222210001222122221000 Q gi|254780922|r 82 VPAG--LAQSYILGAEFI---GDSSSVLILGD--NVFYGSDISDIFHKARARRNSATVVGCHVQNPQRYGVVEVDSSNQA 154 (292) Q Consensus 82 ~p~G--ta~Ai~~a~~~i---~~~~~~lilgD--ni~~~~~l~~~l~~~~~~~~~~ti~~~~v~~p~~yGvv~~d~~~~i 154 (292) T Consensus 76 --GG~~Rq~SV~~GL~a~~~~~~~~~VlvHDaARPf~~~~~~~~l~~~~~-~~~~a~~~A~Pv~DT----lK~~~~~G~~ 148 (226) T TIGR00453 76 --GGDTRQDSVRNGLKALPERADAEIVLVHDAARPFVPKELIDRLLEALE-KGAGAAILALPVADT----LKRVDADGFV 148 (226) T ss_pred --CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH-HCCCCEEEEEECCCE----EEEECCCCCE T ss_conf --987468999999998763589882898477345889879999999986-079834874205431----5774488862 Q ss_pred HHCCCCCCCCCCCCCHHHHH-HHHHHHHHH--HHH-CCC-CCCCCCCCCCCCCHHCCC-CCEEEEECCCCEEEECCCCHH Q ss_conf 10013333322222202455-410002243--220-046-753333333432000001-320463135412563278457 Q gi|254780922|r 155 ISIEEKPNNPKSSFAVTGIY-FYDQEVVNI--ARN-IRP-SARGELEITDVNSYYLDK-GLLAVEFLREGSAWFDAGTPE 228 (292) Q Consensus 155 ~~i~EKP~~~~sn~a~~GiY-~f~~~i~~~--~~~-l~~-s~rgE~eitD~~~~~l~~-~~~~~~~~~~g~~W~D~Gt~e 228 (292) T Consensus 149 ~~T~dR----------~~Lw~~QTPQ~F~~~~L~~Ah~~~A~~~g~~~TDDA~~~E~~~G~~v~LVeG~~-~n~KiT~P~ 217 (226) T TIGR00453 149 VETVDR----------EGLWAAQTPQAFRRELLLKAHARAAKAEGFEITDDASAVERLFGGKVALVEGDA-DNFKITTPE 217 (226) T ss_pred ECCCCC----------CCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCC-CCEECCCHH T ss_conf 026662----------145255768876888999999999984698513589999996389728872761-011036727 Q ss_pred HHHHHHH Q ss_conf 7999999 Q gi|254780922|r 229 SLLDTAV 235 (292) Q Consensus 229 ~l~~As~ 235 (292) T Consensus 218 DL~~Ae~ 224 (226) T TIGR00453 218 DLALAEA 224 (226) T ss_pred HHHHHHH T ss_conf 8999875

HHsearch alignment for GI: 254780922 and conserved domain: TIGR00453