HHsearch alignment for GI: 254780922 and conserved domain: TIGR01479

>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; InterPro: IPR006375 This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (5.3.1.8 from EC) (PMI) and mannose-1-phosphate guanylyltransferase (2.7.7.22 from EC) in Pseudomonas aeruginosa, Xanthomonas campestris, and Acetobacter xylinus. The literature on the enzyme from Escherichia coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain lies at the C-terminal. ; GO: 0008928 mannose-1-phosphate guanylyltransferase (GDP) activity, 0009103 lipopolysaccharide biosynthetic process.
Probab=98.79  E-value=3.4e-09  Score=77.87  Aligned_cols=232  Identities=19%  Similarity=0.283  Sum_probs=132.3

Q ss_pred             EEEEECCCCCCCCCHHHCC-CCCCEEEECC-E-EHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf             0799248887455334438-9822224783-7-4799999999978-98689999777656431112222222211112-
Q gi|254780922|r    2 KGIVLAGGSGTRLRPLTDL-LSKQMLPIYN-K-PMIYYPVSTLMDA-GIREILIISTPRDLPVLKEFLGSGEKWGVQFS-   76 (292)
Q Consensus         2 kaiIlAaG~GtRl~P~T~~-~pK~Llpi~g-k-plI~~~l~~l~~~-Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~-   76 (292)
T Consensus         2 ~p~~~~gg~g~~lwp~~~~~~p~~f~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~f~~~~~~~---~~~~~~~~   78 (478)
T TIGR01479         2 LPVILAGGSGTRLWPLSRELYPKQFLALVGDLYTLLQETLKRLAGLPDCSSPLVICNEEHRFLVAEQLR---ELGLLASN   78 (478)
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHH---HHCCCCCC
T ss_conf             522640787750121211220034432045204678999986226642236525524203468888898---60652222


Q ss_pred             CCCCCCCCCCCCCCCCCC-----CCCCCCCCCEEECCC-CCCCC-CCCCHHHHHCCCHHH--HHCCCCCCCCC-CCCCCC
Q ss_conf             223333224468521011-----123356752132144-32111-100001110000011--10012222100-012221
Q gi|254780922|r   77 YIEQLVPAGLAQSYILGA-----EFIGDSSSVLILGDN-VFYGS-DISDIFHKARARRNS--ATVVGCHVQNP-QRYGVV  146 (292)
Q Consensus        77 y~~q~~p~Gta~Ai~~a~-----~~i~~~~~~lilgDn-i~~~~-~l~~~l~~~~~~~~~--~ti~~~~v~~p-~~yGvv  146 (292)
T Consensus        79 ~~l~p~g~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~~fg~~p~~p~~gygy~  158 (478)
T TIGR01479        79 ILLEPVGRNTAPAIALAALLALRRAPGEDPLLLVLAADHVITDEDAFRAAVKLALPAAAEGKLVTFGIVPTTPETGYGYI  158 (478)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH
T ss_conf             14302666415789999998764057877478986155111003678999876432433175478502357765453111


Q ss_pred             CCC--C----------CCCHHHCCCCCCCCC-C-------CCCHHHHHHHHH------------HHHHHHHHCCCCCCCC
Q ss_conf             222--2----------100010013333322-2-------222024554100------------0224322004675333
Q gi|254780922|r  147 EVD--S----------SNQAISIEEKPNNPK-S-------SFAVTGIYFYDQ------------EVVNIARNIRPSARGE  194 (292)
Q Consensus       147 ~~d--~----------~~~i~~i~EKP~~~~-s-------n~a~~GiY~f~~------------~i~~~~~~l~~s~rgE  194 (292)
T Consensus       159 ~~g~~~~~~~~~~~~~~~~~~~f~~~p~~~~~~~~~~~g~~~wn~g~f~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~d  238 (478)
T TIGR01479       159 RRGLDAPLAGGDDGDDVYAVERFVEKPDLATAQEYLESGDYYWNSGMFLFRASRYLAELKKHAPDIYDACEAALEASEPD  238 (478)
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             01443102442112214666665405455678999751762001430000135789988763058899999987410234


Q ss_pred             CCCC------------CCCCHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHH
Q ss_conf             3333------------43200000132046313541256327845779999999
Q gi|254780922|r  195 LEIT------------DVNSYYLDKGLLAVEFLREGSAWFDAGTPESLLDTAVF  236 (292)
Q Consensus       195 ~eit------------D~~~~~l~~~~~~~~~~~~g~~W~D~Gt~e~l~~As~~  236 (292)
T Consensus       239 ~~~~~~~~~~f~~~p~~~~d~~~~~~~~~~~~~p~~~~w~d~g~w~~~w~~~~~  292 (478)
T TIGR01479       239 LDFIRLDKEAFEACPSESIDYAVMEKTSDAVVVPLDAGWSDVGSWSALWEISDK  292 (478)
T ss_pred             CCHHCCCHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCC
T ss_conf             201000457874062100002322214570687235665433431344320035