HHsearch alignment for GI: 254780922 and conserved domain: TIGR02092
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit; InterPro: IPR011832 This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, IPR011831 from INTERPRO) in a subset of bacteria that use GlgC for glycogen biosynthesis.; GO: 0005978 glycogen biosynthetic process.
Probab=99.82 E-value=3.9e-21 Score=152.76 Aligned_cols=240 Identities=19% Similarity=0.311 Sum_probs=176.1
Q ss_pred CEEEEECCCCCCCCCHHHCCCCCCEEEECCE-EHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC-----
Q ss_conf 9079924888745533443898222247837-4799999999978986899997776564311122222222111-----
Q gi|254780922|r 1 MKGIVLAGGSGTRLRPLTDLLSKQMLPIYNK-PMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGEKWGVQ----- 74 (292)
Q Consensus 1 MkaiIlAaG~GtRl~P~T~~~pK~Llpi~gk-plI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~----- 74 (292)
T Consensus 3 ~~aIi~l~~~~~~l~~LT~~Rp~A~~PfgGrYRlIDF~LSn~~NAgI~~v~~~~~~~~~~Sl~DHLg~G~eWdL~r~~~g 82 (383)
T TIGR02092 3 MSAIINLTESKKNLSPLTKVRPVASLPFGGRYRLIDFPLSNMVNAGIRNVAVFFKNKERRSLFDHLGSGREWDLNRKRDG 82 (383)
T ss_pred EEEEEECCCCCHHCCCHHHHCCCEEECCCCEEEEEECCHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCC
T ss_conf 58997357882011314550870332358647788301002310360022465266665315221348688361102575
Q ss_pred -CCCC-CCCCC--CCCC-------CCCCCCCCCCCC--CCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCC-
Q ss_conf -1222-33332--2446-------852101112335--67521321443211110000111000001110012222100-
Q gi|254780922|r 75 -FSYI-EQLVP--AGLA-------QSYILGAEFIGD--SSSVLILGDNVFYGSDISDIFHKARARRNSATVVGCHVQNP- 140 (292)
Q Consensus 75 -i~y~-~q~~p--~Gta-------~Ai~~a~~~i~~--~~~~lilgDni~~~~~l~~~l~~~~~~~~~~ti~~~~v~~p- 140 (292)
T Consensus 83 lF~~pP~~~~~~~~~~~~kaall~~~~~~~l~fl~rS~~~y~V~~~s~~v~NiDl~~~l~~H~~~~~~iT~VYKkv~~~~ 162 (383)
T TIGR02092 83 LFLFPPKYNDRDDVSEGGKAALLKRYFSNNLEFLKRSTSEYVVVLNSHMVCNIDLKAVLKRHEETGKDITVVYKKVKKAD 162 (383)
T ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 27706876864323456337788999988767875089971898547457830289999998744896689973478467
Q ss_pred -C-CC-CCCCCCCCCCHHHCC----C--CCCCCCCCCCHHHHHHHHHHHH-HHHHHCCCCCCCCCC-CCCCCCHHCCCCC
Q ss_conf -0-12-221222210001001----3--3333222222024554100022-432200467533333-3343200000132
Q gi|254780922|r 141 -Q-RY-GVVEVDSSNQAISIE----E--KPNNPKSSFAVTGIYFYDQEVV-NIARNIRPSARGELE-ITDVNSYYLDKGL 209 (292)
Q Consensus 141 -~-~y-Gvv~~d~~~~i~~i~----E--KP~~~~sn~a~~GiY~f~~~i~-~~~~~l~~s~rgE~e-itD~~~~~l~~~~ 209 (292)
T Consensus 163 ~~~~~c~~L~~De~g~v~s~~Pms~~~~~~~~e~~n-~Sl~~yi~~t~lLiell~~~--~~~g~~~~l~~~~~~~l~~~~ 239 (383)
T TIGR02092 163 LSEEDCTILKFDEKGEVKSIGPMSVAKNLNKEEEEN-LSLDIYILSTELLIELLYEC--IQKGKKTSLEELIRENLKELN 239 (383)
T ss_pred CCCCCCCEEEECCCCCEEEEECEEEECCCCCHHHHH-HHHHHEEECHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHCC
T ss_conf 762357278863678568863200002676134443-20100242668999999987--631556799999999998647
Q ss_pred E-EEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 0-463135412563278457799999999998888098
Q gi|254780922|r 210 L-AVEFLREGSAWFDAGTPESLLDTAVFVRNIENRLGL 246 (292)
Q Consensus 210 ~-~~~~~~~g~~W~D~Gt~e~l~~As~~i~~~e~~~g~ 246 (292)
T Consensus 240 ~~aYEY--~G-Yl~~I~s~~sYY~aNM~lL~~~~f~~L 274 (383)
T TIGR02092 240 INAYEY--KG-YLANINSVKSYYKANMDLLEPKIFQSL 274 (383)
T ss_pred CCCCEE--EE-EEEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf 543303--42-211110167898872886316876887