HHsearch alignment for GI: 254780922 and conserved domain: cd02523
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=100.00 E-value=5.2e-43 Score=290.01 Aligned_cols=222 Identities=23% Similarity=0.329 Sum_probs=170.9
Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79924888745533443898222247837479999999997898689999777656431112222222211112223333
Q gi|254780922|r 3 GIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGEKWGVQFSYIEQLV 82 (292)
Q Consensus 3 aiIlAaG~GtRl~P~T~~~pK~Llpi~gkplI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~~q~~ 82 (292)
T Consensus 1 AiILAaG~GtRl~plT~~~PK~L~~i~gkpli~~~i~~l~~~gi~~i~iv~gy~~-e~i~~~~~~~--~~i~~i~n~~~~ 77 (229)
T cd02523 1 AIILAAGRGSRLRPLTEDRPKCLLEINGKPLLERQIETLKEAGIDDIVIVTGYKK-EQIEELLKKY--PNIKFVYNPDYA 77 (229)
T ss_pred CEEECCCCCCCCCCCCCCCCCCCCEECCEEHHHHHHHHHHHCCCCCCEEECCCCH-HHHHHHHHHC--CCCCCEEEEECC
T ss_conf 9893687765688645798803217998799999999999849985366555489-9999998531--365403400023
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHCCCC--CCCCCCCCCCCCCCCCCCHHHCCCC
Q ss_conf 22446852101112335675213214432111100001110000011100122--2210001222122221000100133
Q gi|254780922|r 83 PAGLAQSYILGAEFIGDSSSVLILGDNVFYGSDISDIFHKARARRNSATVVGC--HVQNPQRYGVVEVDSSNQAISIEEK 160 (292)
Q Consensus 83 p~Gta~Ai~~a~~~i~~~~~~lilgDni~~~~~l~~~l~~~~~~~~~~ti~~~--~v~~p~~yGvv~~d~~~~i~~i~EK 160 (292)
T Consensus 78 ~~g~~~sl~~a~~~~~-~~~lv~~gD~i-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 151 (229)
T cd02523 78 ETNNIYSLYLARDFLD-EDFLLLEGDVV-FDPSILERLL---SSPADNAILVDKKTKEWEDEYVKDLD-DAGVLLGIISK 151 (229)
T ss_pred CCCHHHHHHHHHHHCC-CCEEEEECCEE-CCHHHHHHHH---HCCCCCEEEEEECCCCCCCCEEEEEC-CCCCEEEEEEC
T ss_conf 6782999998887558-98599957765-4667999998---47788879999564577874479942-68708999868
Q ss_pred CCCCCC-CCCHHHHHHHHHHHHH----HHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCEEEECCCCHHHHHHHH
Q ss_conf 333222-2220245541000224----3220046753333333432000001320463135412563278457799999
Q gi|254780922|r 161 PNNPKS-SFAVTGIYFYDQEVVN----IARNIRPSARGELEITDVNSYYLDKGLLAVEFLREGSAWFDAGTPESLLDTA 234 (292)
Q Consensus 161 P~~~~s-n~a~~GiY~f~~~i~~----~~~~l~~s~rgE~eitD~~~~~l~~~~~~~~~~~~g~~W~D~Gt~e~l~~As 234 (292)
T Consensus 152 ~~~~~~~~~~~~Gi~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~-~W~dIgt~edl~~Ae 229 (229)
T cd02523 152 AKNLEEIQGEYVGISKFSPEDADRLAEALEELIEAGRVNLYYEDALQRLISEEGVKVKDISDG-FWYEIDDLEDLERAE 229 (229)
T ss_pred CCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCC-EEEECCCHHHHHHHC
T ss_conf 999887462899999998999999999999728677787239999999980799669984893-199696999999649