HHsearch alignment for GI: 254780922 and conserved domain: cd04187
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=90.31 E-value=0.22 Score=28.91 Aligned_cols=157 Identities=13% Similarity=0.091 Sum_probs=72.6
Q ss_pred EEEECCE-----EHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2247837-----4799999999978986-899997776564311122222222111122233332244685210111233
Q gi|254780922|r 25 MLPIYNK-----PMIYYPVSTLMDAGIR-EILIISTPRDLPVLKEFLGSGEKWGVQFSYIEQLVPAGLAQSYILGAEFIG 98 (292)
Q Consensus 25 Llpi~gk-----plI~~~l~~l~~~Gi~-~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~~q~~p~Gta~Ai~~a~~~i~ 98 (292)
T Consensus 2 IIP~yNEe~~I~~~i~~i~~~~~~~~~~~eIivVDD-~StD~T~~i~~~l~~~~~~v~~i~~~~N~G~g~Ai~~g~~~a~ 80 (181)
T cd04187 2 VVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDD-GSTDRTLEILRELAARDPRVKVIRLSRNFGQQAALLAGLDHAR 80 (181)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC-CCCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 996167888799999999999865599879999989-9975624542012123332045314557644678898998556
Q ss_pred CCCCCEE-ECCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCC-CCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 5675213-214432111100001110000011100122221000122212222-10001001333332222220245541
Q gi|254780922|r 99 DSSSVLI-LGDNVFYGSDISDIFHKARARRNSATVVGCHVQNPQRYGVVEVDS-SNQAISIEEKPNNPKSSFAVTGIYFY 176 (292)
Q Consensus 99 ~~~~~li-lgDni~~~~~l~~~l~~~~~~~~~~ti~~~~v~~p~~yGvv~~d~-~~~i~~i~EKP~~~~sn~a~~GiY~f 176 (292)
T Consensus 81 ~d-~i~~~D~D~q~~p~~i~~l~~~-~~~~~D~V-~gsR~~r~~~~~r~~~s~~~~~l~~~l~~~---~~~D~~~gfr~~ 154 (181)
T cd04187 81 GD-AVITMDADLQDPPELIPEMLAK-WEEGYDVV-YGVRKNRKESWLKRLTSKLFYRLINKLSGV---DIPDNGGDFRLM 154 (181)
T ss_pred CC-EEEECCCCCCCCHHHHHHHHHH-HHCCCEEE-EEEEECCCCCHHHHHHHHHHHHHHHHHHCC---CCCCCCCCEEEE
T ss_conf 97-4775189998299999999999-97599199-999707887689999999999999998799---900789286998
Q ss_pred HHHHHHHHHHCC
Q ss_conf 000224322004
Q gi|254780922|r 177 DQEVVNIARNIR 188 (292)
Q Consensus 177 ~~~i~~~~~~l~ 188 (292)
T Consensus 155 ~r~~~~~i~~~~ 166 (181)
T cd04187 155 DRKVVDALLLLP 166 (181)
T ss_pred EHHHHHHHHHCC
T ss_conf 899999987489