>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

Probab=94.17 E-value=0.47 Score=26.51 Aligned_cols=196 Identities=17% Similarity=0.123 Sum_probs=102.0 Q ss_pred EEEEECCH--HHHHHHHHHHHHCCCC-CCEEEEECC--CH--HHHHHHHHHHC-CCCEEEE-ECCCCCHHHHHHHHHCHH Q ss_conf 99994367--7799999999818998-318998086--31--79999998525-8837999-456673178999750644 Q gi|254780923|r 120 IVVHLYYI--DLWIEIANLLSNLSIS-FDLHVTLVT--ES--ASIKSEILKIF-PAARIHI-MENHGRDVLPFLILLETE 190 (365) Q Consensus 120 V~lHlyY~--DLl~Ei~~~L~~ip~~-~DL~ITt~~--~~--~~~~~~i~~~~-~~~~I~v-v~NRGRDI~PfLv~~~~~ 190 (365) T Consensus 2 IiIPayNE~~~vi~~~l~sl~~~~Yp~~eIiVvdd~stD~t~~~~v~~~~~~~~~~~~~~~~~~~~g~K~~alN~~l~~- 80 (236) T cd06435 2 IHVPCYEEPPEMVKETLDSLAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYALER- 80 (236) T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH- T ss_conf 8983589928999999999995799998799998929981589999999987299679999488899709999999996- Q ss_pred HHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHH Q ss_conf 52686889996568676777773344789999998755999999999999862896489815665443333234454102 Q gi|254780923|r 191 QLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270 (365) Q Consensus 191 ~l~~YD~v~kiHTKKS~~~~~h~~~G~~WR~~Ll~~LLGs~~~V~~Il~~F~~np~lGlv~P~~~~~~~~~~~~~~~wg~ 270 (365) T Consensus 81 ~~~~~e~i~~~DaD---------------------~~~-~pd~L~~~v~~f~-~p~vg~v~~~~~~~~-----~~~~~~~ 132 (236) T cd06435 81 TAPDAEIIAVIDAD---------------------YQV-EPDWLKRLVPIFD-DPRVGFVQAPQDYRD-----GEESLFK 132 (236) T ss_pred CCCCCEEEEEECCC---------------------CCC-CHHHHHHHHHHHC-CCCEEEEECCEECCC-----CCCCHHH T ss_conf 47985499997688---------------------777-8689999998604-987689955613148-----7767999 Q ss_pred HHHHHH-HHHHHCCCCC-CCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCE Q ss_conf 289999-9999848998-73326637701477329888878718997121865558888739999999999998873987 Q gi|254780923|r 271 NREMIC-TLAGRMGITF-QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348 (365) Q Consensus 271 N~~~~~-~L~~rlgi~~-~~~~~~FpaGSMFW~Rp~AL~pL~dl~l~~~dFpeE~g~~DGTLaHAIERl~~~iv~~aGyr 348 (365) T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGg-------f~~~~~~ED~d--------l~~rl~~~G~~ 197 (236) T cd06435 133 RMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDDVGG-------WDEWCITEDSE--------LGLRMHEAGYI 197 (236) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEHHHHHHHCC-------CCCCCCCCHHH--------HHHHHHHCCCE T ss_conf 9999999999998898885389747666468878899998389-------88777577799--------99999985997 Q ss_pred EEEEHHHHHHH Q ss_conf 88726642166 Q gi|254780923|r 349 ISDVDCILGYR 359 (365) Q Consensus 349 i~~v~~~~g~~ 359 (365) T Consensus 198 ~~y~p~a~~~~ 208 (236) T cd06435 198 GVYVAQSYGHG 208 (236) T ss_pred EEECCCCEEEE T ss_conf 99725777986

HHsearch alignment for GI: 254780923 and conserved domain: cd06435