BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780923|ref|YP_003065336.1| hypothetical protein
CLIBASIA_04110 [Candidatus Liberibacter asiaticus str. psy62]
         (365 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780923|ref|YP_003065336.1| hypothetical protein CLIBASIA_04110 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040600|gb|ACT57396.1| hypothetical protein CLIBASIA_04110 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 365

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/365 (100%), Positives = 365/365 (100%)

Query: 1   MPVSGCSKGYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWTLFYKRSKKLCYDENYV 60
           MPVSGCSKGYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWTLFYKRSKKLCYDENYV
Sbjct: 1   MPVSGCSKGYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWTLFYKRSKKLCYDENYV 60

Query: 61  VAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAI 120
           VAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAI
Sbjct: 61  VAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAI 120

Query: 121 VVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDV 180
           VVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDV
Sbjct: 121 VVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDV 180

Query: 181 LPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRT 240
           LPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRT
Sbjct: 181 LPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRT 240

Query: 241 FDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFW 300
           FDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFW
Sbjct: 241 FDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFW 300

Query: 301 VRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRK 360
           VRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRK
Sbjct: 301 VRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRK 360

Query: 361 SLSQN 365
           SLSQN
Sbjct: 361 SLSQN 365


>gi|315122651|ref|YP_004063140.1| hypothetical protein CKC_04515 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496053|gb|ADR52652.1| hypothetical protein CKC_04515 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 405

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/357 (61%), Positives = 280/357 (78%), Gaps = 7/357 (1%)

Query: 1   MPVSGCSKGYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWTLF-YKRSKKLCYDENY 59
           +PVSGC KGY LF S  ++WNF S+H  I KV+ + GFFFW  +LF +KR + L YDEN 
Sbjct: 38  LPVSGCRKGYLLFVSRRENWNFDSNHLVIRKVSFFLGFFFWIRSLFLFKRYQTLRYDENR 97

Query: 60  VVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIA 119
           ++AYGSR GKKFFA SN  M+ R + FDG++IH FP+LLHGW+SP+  K+  + I++++A
Sbjct: 98  IIAYGSRIGKKFFACSNKDMLARGVPFDGEKIHRFPRLLHGWDSPSSEKIASVKIQSRVA 157

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRD 179
           IVVH+YY DLW EIANLLS L+ SFDLH+TLVTE ASIKSEILK FP A I++MEN+GRD
Sbjct: 158 IVVHIYYADLWAEIANLLSGLNFSFDLHITLVTEIASIKSEILKRFPNAHIYVMENYGRD 217

Query: 180 VLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIR 239
           +  FL LLE  +L +YDYVCKIHGKKSKR G+ WW+GDLWRRWLF+DLLGAPG+  +II+
Sbjct: 218 IRSFLKLLEGGKLDSYDYVCKIHGKKSKRNGHVWWDGDLWRRWLFFDLLGAPGIALEIIK 277

Query: 240 TFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMF 299
           TF+ +  IGMIGSR YRY     D   SLG NRE +C +A +MG++F+D K+DFF GTMF
Sbjct: 278 TFEKYPKIGMIGSRTYRY-----DQKISLGNNREFVCAIANKMGVSFEDTKIDFFGGTMF 332

Query: 300 WVRTEALDPIKNLRLSRYFEPKVHK-ALDGEIEHAVERCFSLSVKKANFRISDVDCI 355
           WVR +ALDPIKNL L++YF+ KV    LDG +EHA+ERCFS+SV+KANF ++ VDC+
Sbjct: 333 WVRPQALDPIKNLALTQYFKSKVDMVGLDGCLEHAIERCFSISVEKANFDLAYVDCL 389


>gi|315122628|ref|YP_004063117.1| hypothetical protein CKC_04400 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496030|gb|ADR52629.1| hypothetical protein CKC_04400 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 399

 Score =  272 bits (695), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 148/358 (41%), Positives = 216/358 (60%), Gaps = 5/358 (1%)

Query: 9   GYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWT-LFYKRSKKLCYDENYVVAYGSRS 67
           GY++  S  K     S+    E+V  +    FW  + L + +  +L +    +  YGSR 
Sbjct: 45  GYYMLWSLSKEQKITSEDVFFEEVTTFKACLFWLRSFLTFSKYSQLSFPSCRIFFYGSRK 104

Query: 68  GKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWES-PAMGKVMQIAIKAKIAIVVHLYY 126
            KK F + N +M    + FDG++  +  +L  GW++  ++    +I I +KIAIVVH YY
Sbjct: 105 DKKAFFRLNRFMSNSRMPFDGKKFLYIKELFEGWKNLSSLDNKGKIKINSKIAIVVHCYY 164

Query: 127 IDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
            D W EI++LL  L+  FDL +T V ++   + ++LK FP+AR+++MEN GRDVLPFL L
Sbjct: 165 QDTWDEISHLLLRLNFDFDLFITTVKKNKDFEQDVLKNFPSARLYVMENKGRDVLPFLCL 224

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           LE     +YDY+CKIHGKKS R+ Y  +EG LWRRW+F+DLLG   +  +II  F+ +  
Sbjct: 225 LELGVFYDYDYLCKIHGKKSARRNYHPFEGILWRRWIFFDLLGFSDIALRIINKFEQNPS 284

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
           IGMIGS  +R   KY  +     K  + +  LA R+    ++  LDFF GTMFWVR + L
Sbjct: 285 IGMIGSGRFRRYKKYSFFK-KRSKVYKRVVDLARRIDFPVEELDLDFFNGTMFWVRPKCL 343

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRKSLSQ 364
           +P++N+ L+  FE + +   DG +EHAVER F LSV++A F +  VDC+  Y + LSQ
Sbjct: 344 EPLRNIHLTGEFEEECNLE-DGALEHAVERFFPLSVQRAGFSLESVDCVAEYDQ-LSQ 399


>gi|254780201|ref|YP_003064614.1| hypothetical protein CLIBASIA_00430 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254039878|gb|ACT56674.1| hypothetical protein CLIBASIA_00430 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 394

 Score =  268 bits (686), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 146/356 (41%), Positives = 212/356 (59%), Gaps = 4/356 (1%)

Query: 9   GYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWT-LFYKRSKKLCYDENYVVAYGSRS 67
           GY++  S        S   + ++++++  F FW  + L + +  KL +    +  YGSR 
Sbjct: 40  GYYVLWSFSPKQRITSKDVHFQELSIFESFIFWLRSFLAFSKYSKLSFPSCRIFFYGSRK 99

Query: 68  GKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGW-ESPAMGKVMQIAIKAKIAIVVHLYY 126
            +K F + N +M    + FD ++  +  +L  GW + P+  K   + IK+KIAIVVH YY
Sbjct: 100 EQKAFLRLNRFMSNSRMPFDSEKFLYVKELFEGWNDRPSSPKKSGLTIKSKIAIVVHCYY 159

Query: 127 IDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
            D WIEI+++L  L+  FDL VT+V  +   + ++LK FP+A++++MEN GRDV PFL L
Sbjct: 160 QDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPSAQLYVMENKGRDVRPFLYL 219

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           LE      YDY+CKIHGKKS+R+GY   EG +WRRWLF+DLLG   +  +II TF+ +  
Sbjct: 220 LELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPC 279

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
           +GMIGSR YR   ++  +       R +I  LA R G   +   LDFF GTMFWV+ + L
Sbjct: 280 LGMIGSRRYRRYKRWSFFAKRSEVYRRVI-DLAKRAGFPTKRLHLDFFNGTMFWVKPKCL 338

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRKSL 362
           +P++NL L   FE +     DG +EHAVER F+ SV+   F I  VDC+  Y + L
Sbjct: 339 EPLRNLHLIGEFEEE-RNLKDGALEHAVERFFACSVRYTEFSIESVDCVAEYERLL 393


>gi|13474020|ref|NP_105588.1| hypothetical protein mll4799 [Mesorhizobium loti MAFF303099]
 gi|14024772|dbj|BAB51374.1| mll4799 [Mesorhizobium loti MAFF303099]
          Length = 386

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/300 (36%), Positives = 154/300 (51%), Gaps = 16/300 (5%)

Query: 62  AYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIV 121
           A GS +G  F   S+        HF+G +    P+ L               ++ KIA+ 
Sbjct: 99  ALGSLAGWGFGTASDNLQKTLSRHFNGPQAEA-PERLP-------------TVEPKIAVA 144

Query: 122 VHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVL 181
           +HL+Y DLW E   LL      F L +TL    A++   +   FP A I + EN GRDV 
Sbjct: 145 LHLHYPDLWPEFEALLEATGRQFQLFLTLTRPDAALAQRVQARFPGAEITVYENRGRDVG 204

Query: 182 PFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTF 241
           PF+ LL   +   +D +CK+HGKKS + G     G++WR+   +DL+G+ GVV +II  F
Sbjct: 205 PFIQLLREGKFDPFDLICKLHGKKSGQSGPRMVLGEIWRQVSAFDLIGSRGVVDRIIANF 264

Query: 242 DTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWV 301
           +   D  MIGSR +R PN++     + G+NR M   L   MG+     +LDFFAGTMFWV
Sbjct: 265 ERSPDTQMIGSRRFRLPNEWKGEKSAWGENRAMALNLLETMGMP-SSSRLDFFAGTMFWV 323

Query: 302 RTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRKS 361
           R  AL+P++ L L     P+     DG ++HA+ER   +   K     SD D     R++
Sbjct: 324 RRGALEPLRRLDLPLAAFPEETGQQDGTLQHALERVLGMICTKIGV-ASDGDMTTDSREA 382


>gi|299133415|ref|ZP_07026610.1| Rhamnan synthesis F [Afipia sp. 1NLS2]
 gi|298593552|gb|EFI53752.1| Rhamnan synthesis F [Afipia sp. 1NLS2]
          Length = 408

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 5/236 (2%)

Query: 104 PAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILK 163
           P   K +Q+  +    I+VHL+Y D+W +    L NL+  F L VTL   +    + +  
Sbjct: 153 PGAPKPLQLNGRIATGIIVHLHYCDVWPDFEKRLRNLTCPFSLIVTLNESNPDFAARVAG 212

Query: 164 IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWL 223
            FP A++ +  N GRDV PF+ LL    L +++ +CK+HGKK+   G     G++WRR L
Sbjct: 213 QFPNAKVLVYPNRGRDVGPFIQLLREGHLDDFELICKLHGKKTVSLGPRMIFGEIWRRLL 272

Query: 224 FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
             DL+G+  +V  I++ F +   +G++GS  +R      +Y  +  +N  +   LA R+G
Sbjct: 273 LNDLVGSDELVRAILQRFISQPGLGLVGSSHFR-----GNYLGTWPRNAALTLELAKRLG 327

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
              +  KLDFFAGTMFWVR E LD +K+L LS+   P      DG ++HA+ER F 
Sbjct: 328 CPEERFKLDFFAGTMFWVRRELLDLLKSLNLSQDDFPVEAGQTDGTLQHALERIFG 383


>gi|312962408|ref|ZP_07776899.1| lipopolysaccharide biosynthesis protein-like protein [Pseudomonas
            fluorescens WH6]
 gi|311283335|gb|EFQ61925.1| lipopolysaccharide biosynthesis protein-like protein [Pseudomonas
            fluorescens WH6]
          Length = 1308

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 24/255 (9%)

Query: 106  MGKVMQIAIK-----AKIAIVVHLYYIDLWIEIANLLSNL-SISFDLHVTLVTESASIKS 159
            + KV ++A K     A  A+V+HL+Y DLW +I + L +   + +DL+VT+ + SA ++ 
Sbjct: 1070 ISKVSRMAFKRSVRQADYAVVLHLHYDDLWDDIKSYLDSFGQLEYDLYVTVTSSSAGVR- 1128

Query: 160  EILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLW 219
             + + +P A I ++EN GRDVLPFL +L+  +   Y  VCKIH K+S  +     +GD  
Sbjct: 1129 -VAQEYPKAHIQLVENRGRDVLPFLKILQVIKDMGYVAVCKIHSKRSLYRD----DGDKI 1183

Query: 220  RRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYT-CSLGKNREMICTL 278
            R  L   LLG+   +  ++  F+  +DIG+I    Y  P+   + T C       ++  L
Sbjct: 1184 RGELIGSLLGSKETILSVVDRFERQKDIGVIVPVKYLIPHTDHNMTYCG-----AIVTEL 1238

Query: 279  AGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKAL-DGEIEHAVERC 337
            + ++G  F     +F AG+MFW R +AL+ + ++  S +   +V   L DG I H +ER 
Sbjct: 1239 SSKLGFNF--SYCEFIAGSMFWFRPKALEALLSIDESSF---EVEDGLADGTIAHGIERV 1293

Query: 338  FSLSVKKANFRISDV 352
                VKKAN+ +  +
Sbjct: 1294 LCNVVKKANYTVETI 1308


>gi|218455303|gb|AAX19606.2| WxocB [Xanthomonas oryzae pv. oryzicola]
          Length = 568

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 146/284 (51%), Gaps = 29/284 (10%)

Query: 79  MMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYIDLW 130
           M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++IDL 
Sbjct: 272 MIEREVARMRQTRKNIMPIVTGDDSPASDELERYGVGAIDAESLSSRFAIVLHLFHIDLI 331

Query: 131 IEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHIMENHGRDVLPFLIL 186
             I   + N+ + +D+ V++  +S S +   ++ F      A + I  N GRDV PF+ L
Sbjct: 332 DAICAYMRNVIVDYDVFVSV--KSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSK-RKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHR 245
           L T  L  YD VCKIH KKS  R G   W  DL +      LLG+   V +++R FD H 
Sbjct: 390 LNTGLLDRYDAVCKIHSKKSVYRDGGGQWRDDLMKA-----LLGSSFDVLRVLRAFDDHP 444

Query: 246 DIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEA 305
             G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  A
Sbjct: 445 ACGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAA 499

Query: 306 LDPI--KNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
           L  +  +++ LS  F+P+  +  D  + H +ER F L V++A F
Sbjct: 500 LSALRARSIGLSE-FDPEAGQR-DATLAHVIERLFVLWVEQAGF 541


>gi|218455307|gb|AAX19610.2| WxocB [Xanthomonas oryzae pv. oryzicola]
 gi|218455309|gb|AAX19612.2| WxocB [Xanthomonas oryzae pv. oryzicola]
          Length = 568

 Score =  129 bits (323), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 144/283 (50%), Gaps = 27/283 (9%)

Query: 79  MMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYIDLW 130
           M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++IDL 
Sbjct: 272 MIEREVARMRQTRKNIMPIVTGGDSPASDELERYGVGAIDAESLSSRFAIVLHLFHIDLI 331

Query: 131 IEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHIMENHGRDVLPFLIL 186
             I   + N+ + +D+ V++  +S S +   ++ F      A + I  N GRDV PF+ L
Sbjct: 332 DAICAYMRNVIVDYDVFVSV--KSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L T  L  YD VCKIH KKS         G  WR  L   LLG+   V +++R FD H  
Sbjct: 390 LNTGLLDRYDAVCKIHSKKSVYHD----GGGQWRDDLMKALLGSSFDVLRVLRAFDDHPA 445

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  AL
Sbjct: 446 CGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAAL 500

Query: 307 DPI--KNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
             +  +++ LS  F+P+  +  D  + H +ER F L V++A F
Sbjct: 501 SALRARSIGLSE-FDPEAGQR-DATLAHVIERLFVLWVEQAGF 541


>gi|218455296|gb|AAV67426.2| glycosyltransferase [Xanthomonas oryzae pv. oryzicola]
 gi|218455299|gb|AAX19602.2| WxocB [Xanthomonas oryzae pv. oryzicola]
 gi|218455301|gb|AAX19604.2| WxocB [Xanthomonas oryzae pv. oryzicola]
          Length = 568

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 144/283 (50%), Gaps = 27/283 (9%)

Query: 79  MMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYIDLW 130
           M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++IDL 
Sbjct: 272 MIEREVARMRQTRKNIMPIVTGDDSPASDELERYGVGAIDAESLSSRFAIVLHLFHIDLI 331

Query: 131 IEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHIMENHGRDVLPFLIL 186
             I   + N+ + +D+ V++  +S S +   ++ F      A + I  N GRDV PF+ L
Sbjct: 332 DAICAYMRNVIVDYDVFVSV--KSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L T  L  YD VCKIH KKS         G  WR  L   LLG+   V +++R FD H  
Sbjct: 390 LNTGLLDRYDAVCKIHSKKSVYHD----GGGQWRDDLMKALLGSSFDVLRVLRAFDDHPA 445

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  AL
Sbjct: 446 CGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAAL 500

Query: 307 DPI--KNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
             +  +++ LS  F+P+  +  D  + H +ER F L V++A F
Sbjct: 501 SALRARSIGLSE-FDPEAGQR-DATLAHVIERLFVLWVEQAGF 541


>gi|166713474|ref|ZP_02244681.1| hypothetical protein Xoryp_19045 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 568

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 144/283 (50%), Gaps = 27/283 (9%)

Query: 79  MMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYIDLW 130
           M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++IDL 
Sbjct: 272 MIEREVARMRQTRKNIMPIVTGDDSPASDELERYGVGAIDAESLSSRFAIVLHLFHIDLI 331

Query: 131 IEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHIMENHGRDVLPFLIL 186
             I   + N+ + +D+ V++  +S S +   ++ F      A + I  N GRDV PF+ L
Sbjct: 332 DAICAYMRNVIVDYDVFVSV--KSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L T  L  YD VCKIH KKS         G  WR  L   LLG+   V +++R FD H  
Sbjct: 390 LNTGLLDRYDAVCKIHSKKSVYHD----GGGQWRDDLMKALLGSSFDVLRVLRAFDDHPA 445

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  AL
Sbjct: 446 CGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAAL 500

Query: 307 DPI--KNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
             +  +++ LS  F+P+  +  D  + H +ER F L V++A F
Sbjct: 501 SALRARSIGLSE-FDPEAGQR-DATLAHVIERLFVLWVEQAGF 541


>gi|218455305|gb|AAX19608.2| WxocB [Xanthomonas oryzae pv. oryzicola]
          Length = 568

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 144/283 (50%), Gaps = 27/283 (9%)

Query: 79  MMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYIDLW 130
           M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++IDL 
Sbjct: 272 MIEREVARMRQTRKNIMPIVTGDDSPASDELERYGVGAIDAESLSSRFAIVLHLFHIDLI 331

Query: 131 IEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHIMENHGRDVLPFLIL 186
             I   + N+ + +D+ V++  +S S +   ++ F      A + I  N GRDV PF+ L
Sbjct: 332 DAICAYMRNVIVDYDVFVSV--KSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L T  L  YD VCK+H KKS         G  WR  L   LLG+   V +++R FD H  
Sbjct: 390 LNTGLLDRYDAVCKVHSKKSVYHD----GGGQWRDDLMKALLGSSFNVLRVLRAFDDHPA 445

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  AL
Sbjct: 446 CGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAAL 500

Query: 307 DPI--KNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
             +  +++ LS  F+P+  +  D  + H +ER F L V++A F
Sbjct: 501 SALRARSIGLSE-FDPEAGQR-DATLAHVIERLFVLWVEQAGF 541


>gi|84501312|ref|ZP_00999517.1| hypothetical protein OB2597_13143 [Oceanicola batsensis HTCC2597]
 gi|84390603|gb|EAQ03091.1| hypothetical protein OB2597_13143 [Oceanicola batsensis HTCC2597]
          Length = 741

 Score =  122 bits (306), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 119/240 (49%), Gaps = 17/240 (7%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV---TESASIKSEILKIFPAARIH 171
           +A+ AI +HLYY DLW E +  L  L +SFDL+VTL     E+  +   I +  P A++ 
Sbjct: 127 RARFAIHLHLYYPDLWPEFSERLDRLDLSFDLYVTLTWRGPETEWLADIIREAHPRAQVF 186

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
            + N GRD+LPFL LL       Y+ +CK+HGKKS  +     +GD WRR L   +L  P
Sbjct: 187 PVANRGRDILPFLRLLNAGAFDGYEAICKLHGKKSPHRD----DGDAWRRHLVDGVL--P 240

Query: 232 G-VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK 290
           G  ++  +  F    D  +  +   RY  +        G NR     L  R+ +   D  
Sbjct: 241 GKALWTSLSAFLADEDAALWVADGQRYSVRKW-----WGSNRARTDALLRRVELDRSDTD 295

Query: 291 LDFFAGTMFWVRTEALDPIKNLRLSR-YFEPKVHKALDGEIEHAVERCFSLSVKKANFRI 349
            DF AG+M+W++   L  I+ L L+   FEP+  +  DG + HA ER      K A   +
Sbjct: 296 FDFPAGSMYWMKPLLLGMIRALDLTEDLFEPESGQT-DGTLAHAFERAIGALAKAAGQEV 354


>gi|190572676|ref|YP_001970521.1| putative glycosyltransferase, fusion protein [Stenotrophomonas
           maltophilia K279a]
 gi|190010598|emb|CAQ44207.1| putative glycosyltransferase, fusion protein [Stenotrophomonas
           maltophilia K279a]
          Length = 566

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 17/248 (6%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKI 164
            +G +    +K++ AIV+HLY++DL   I   + N+ +  DL V++  +S + +   ++ 
Sbjct: 304 GVGAIPADKLKSRFAIVLHLYHLDLIESIQGYMKNMIVDHDLFVSV--KSVADRRVAVRF 361

Query: 165 FPAARIH----IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWR 220
           F   ++     +  N GRDV PF+ LL T  L  YD VCKIH KKS         G  WR
Sbjct: 362 FEERKVRAFVFVHPNIGRDVGPFVSLLNTGLLDRYDAVCKIHSKKSVYHD----GGGQWR 417

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAG 280
             L   LLG+   V KI+R F      G++G       + Y       G N E +  LA 
Sbjct: 418 DELMKSLLGSSHTVLKILRAFRHDSSCGIVGPE-----HAYVSNARFWGGNEERLRRLAA 472

Query: 281 RMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLS-RYFEPKVHKALDGEIEHAVERCFS 339
             GI     +L FFAGTMFW R  AL  ++   L+   F+P+  + LD  + H +ER F 
Sbjct: 473 ETGIDDARIRLGFFAGTMFWFRPAALYALRERALALSEFDPEAGQ-LDATLAHVIERLFV 531

Query: 340 LSVKKANF 347
           L V++A +
Sbjct: 532 LWVEQAGY 539


>gi|145588508|ref|YP_001155105.1| methyltransferase type 11 [Polynucleobacter necessarius subsp.
            asymbioticus QLW-P1DMWA-1]
 gi|145046914|gb|ABP33541.1| Methyltransferase type 11 [Polynucleobacter necessarius subsp.
            asymbioticus QLW-P1DMWA-1]
          Length = 1082

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 143/258 (55%), Gaps = 25/258 (9%)

Query: 97   LLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSN-LSI-SFDLHVTLVT-- 152
            +L  + +P   ++++ + +  IAIVVH++Y+D W +I  ++   LS+   D+++T+    
Sbjct: 838  ILKNYINPEHAEIIRESQENSIAIVVHIHYMDTWEDIKKIIKKILSVHDSDIYITITNLE 897

Query: 153  ESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYS 212
            +  SIK++    FP+A I ++EN GRD+LPF+ +L+     NY  +CKIH KKS+ +   
Sbjct: 898  QYQSIKND----FPSANIELVENRGRDILPFINVLKKIIHKNYVAICKIHSKKSEYRS-- 951

Query: 213  WWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK-- 270
              +G++ R+ L++ L+     + KI + F+ ++ +GM+       P KY      +    
Sbjct: 952  --DGEVIRKELYFSLINNEITLEKIPKFFEVNKKLGML------VPGKYFLQHNDINMYF 1003

Query: 271  NREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKAL-DGE 329
            NRE I  +   +G+ F++ K  F AG+MFW R  AL  +  L     F+  V + L DG 
Sbjct: 1004 NRENISKVCSVIGVNFKESK--FPAGSMFWARPAALQKLLKLESGELFD--VEEGLADGT 1059

Query: 330  IEHAVERCFSLSVKKANF 347
            + HAVER F L  + + F
Sbjct: 1060 VAHAVERLFGLVSESSGF 1077


>gi|332561391|ref|ZP_08415706.1| hypothetical protein RSWS8N_20164 [Rhodobacter sphaeroides WS8N]
 gi|332274190|gb|EGJ19507.1| hypothetical protein RSWS8N_20164 [Rhodobacter sphaeroides WS8N]
          Length = 751

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 142/323 (43%), Gaps = 40/323 (12%)

Query: 53  LCYDENYVVAYGSRSGKK----FFAQSNLYMME--------------RELHFDGQRIHHF 94
           L Y E + +AYG R G +    F  Q+ L                  R  H + +     
Sbjct: 50  LKYPEKHYIAYGERLGYRPNPDFSPQAYLRYHPDVAEAGVPPFLHYVRVGHAEQRLTKEL 109

Query: 95  PQLLHGWESPAMGKVMQIAIK-----AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVT 149
           P+++     PA G + Q+  +     A  A+ VH+YY DLW E A  L  L I FDL+VT
Sbjct: 110 PEVV---ALPARG-MPQVRFEHGRQTAPYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVT 165

Query: 150 LV---TESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKS 206
           L     E+ ++  EI   FP A +  M N GRD+LPF+ LL       Y  VCK H KKS
Sbjct: 166 LTYRGEETDALAEEIRADFPGAFVTPMPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKS 225

Query: 207 KRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTC 266
             +     +GDLWR+ L   +L   G+  K +  F    + G   +    Y       T 
Sbjct: 226 PHRQ----DGDLWRKHLIEGILPETGLEEK-LEAFVEAPEAGFWVADGQHYTG-----TQ 275

Query: 267 SLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKAL 326
             G N E    L  R+ I    + L F AG+++WV+   L  +++L+L           +
Sbjct: 276 WWGSNVEATRHLLQRIEIPLDREALSFPAGSIYWVKPLVLGLLRSLQLRLEDFDLEEGQV 335

Query: 327 DGEIEHAVERCFSLSVKKANFRI 349
           DG + HA+ER       +A  ++
Sbjct: 336 DGTLAHAIERVLGYLTARAGQKV 358


>gi|126464825|ref|YP_001041801.1| lipopolysaccharide biosynthesis protein-like [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126106640|gb|ABN79165.1| Lipopolysaccharide biosynthesis protein-like [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 751

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 112/237 (47%), Gaps = 13/237 (5%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV---TESASIKSEILKIFPAARIHI 172
           A  A+ VH+YY DLW E A  L  L I FDL+VTL     E+ ++  EI   FP A +  
Sbjct: 132 APYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVTLTYRGEETDALAEEIRADFPGAFVTP 191

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
           M N GRD+LPF+ LL       Y  VCK H KKS  +     +GDLWR+ L   +L   G
Sbjct: 192 MPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKSPHRQ----DGDLWRKHLIEGILPETG 247

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLD 292
           +  K +  F    + G   +    Y       T   G N E    L  R+ I    + L 
Sbjct: 248 LEEK-LEAFVEAPEAGFWVADGQHYTG-----TQWWGSNVEATRHLLQRIEIPLDREALS 301

Query: 293 FFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRI 349
           F AG+++WV+   L  +++L+L           +DG + HA+ER       +A  ++
Sbjct: 302 FPAGSIYWVKPLVLGLLRSLQLRLEDFDIEEGQVDGTLAHAIERVLGYLTARAGQKV 358


>gi|125654691|ref|YP_001033885.1| hypothetical protein RSP_3918 [Rhodobacter sphaeroides 2.4.1]
 gi|77386351|gb|ABA81780.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 751

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 112/237 (47%), Gaps = 13/237 (5%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV---TESASIKSEILKIFPAARIHI 172
           A  A+ VH+YY DLW E A  L  L I FDL+VTL     E+ ++  EI   FP A +  
Sbjct: 132 APYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVTLTYRGEETDALAEEIRADFPGAFVTP 191

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
           M N GRD+LPF+ LL       Y  VCK H KKS  +     +GDLWR+ L   +L   G
Sbjct: 192 MPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKSPHRQ----DGDLWRKHLIEGILPETG 247

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLD 292
           +  K +  F    + G   +    Y       T   G N E    L  R+ I    + L 
Sbjct: 248 LEEK-LEAFVEAPEAGFWVADGQHYTG-----TQWWGSNVEATRHLLQRIEIPLDREALS 301

Query: 293 FFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRI 349
           F AG+++WV+   L  +++L+L           +DG + HA+ER       +A  ++
Sbjct: 302 FPAGSIYWVKPLVLGLLRSLQLRLEDFDLEEGQVDGTLAHAIERVLGYLTARAGQKV 358


>gi|221634566|ref|YP_002523254.1| Lipopolysaccharide biosynthesis protein-like protein [Rhodobacter
           sphaeroides KD131]
 gi|221163439|gb|ACM04401.1| Lipopolysaccharide biosynthesis protein-like protein [Rhodobacter
           sphaeroides KD131]
          Length = 755

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 112/237 (47%), Gaps = 13/237 (5%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV---TESASIKSEILKIFPAARIHI 172
           A  A+ VH+YY DLW E A  L  L I FDL+VTL     E+ ++  EI   FP A +  
Sbjct: 136 APYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVTLTYRGEETDALAQEIRADFPGAFVTP 195

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
           M N GRD+LPF+ LL       Y  VCK H KKS  +     +GDLWR+ L   +L   G
Sbjct: 196 MPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKSPHRQ----DGDLWRKHLIEGILPETG 251

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLD 292
           +  K +  F    + G   +    Y       T   G N E    L  R+ I    + L 
Sbjct: 252 LEEK-LEAFVEAPEAGFWVADGQHYTG-----TQWWGSNVEATRHLLQRIEIPLDREALS 305

Query: 293 FFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRI 349
           F AG+++WV+   L  +++L+L           +DG + HA+ER       +A  ++
Sbjct: 306 FPAGSIYWVKPLVLGLLRSLQLRLEDFDIEEGQVDGTLAHAIERVLGYLTARAGQKV 362


>gi|259414984|ref|ZP_05738907.1| glycosyl transferase, group 1 [Silicibacter sp. TrichCH4B]
 gi|259349435|gb|EEW61182.1| glycosyl transferase, group 1 [Silicibacter sp. TrichCH4B]
          Length = 680

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 13/234 (5%)

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV---TESASIKSEILKIFPAARIHIMEN 175
           A+V+HLYY DLW E  + L +   +FDL+VTL     E+   ++ I + +P AR+ ++ N
Sbjct: 75  AVVIHLYYTDLWDEFRDRLRSARFTFDLYVTLTEQGPETEETRARIAEDWPEARVLVLPN 134

Query: 176 HGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVF 235
            GRD+ PFL LL    L +Y  VCK+H KKS  +     +GD+WR  L   +L   G   
Sbjct: 135 RGRDIYPFLHLLNAGWLDHYRAVCKLHSKKSPHRQ----DGDVWRTHLTEGIL-PEGETA 189

Query: 236 KIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFA 295
           +++  F    D G+  +    Y           G N E    L  R+ +      LDF A
Sbjct: 190 ELLERFLAAEDCGLWVADGQHYEGARW-----WGSNLERCRNLLARLELAASADTLDFPA 244

Query: 296 GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRI 349
           G+++W++   LD ++ L L            DG + HA+ER   +       +I
Sbjct: 245 GSIYWLKPAILDMLRGLALGFDDFDIEQGQTDGTLAHALERALGMICAAGGLQI 298


>gi|289668432|ref|ZP_06489507.1| hypothetical protein XcampmN_08015 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 945

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 125/256 (48%), Gaps = 18/256 (7%)

Query: 102 ESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKS-- 159
           ++P    V    ++ K+ ++VH++Y DL  E A  L  + + +DL V+++  +A  ++  
Sbjct: 69  QAPFGRPVPSAQLQVKVGVMVHVFYPDLIDEFAQSLQQMPVGYDLLVSVMDNAAEAQARD 128

Query: 160 --EILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGD 217
               L+      I I+ N GRD+ P L+    EQ+   D V  +H KKS    Y+  E  
Sbjct: 129 RFSKLQQIEKLDIRIVPNRGRDIAPLLVTFR-EQILALDVVGHLHTKKSL---YTGSEQG 184

Query: 218 LWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTC---SLGKNREM 274
            WRR+L   L+G+   +   +  F     +GM+      YP  Y        +   N E+
Sbjct: 185 QWRRYLVSSLMGSAERIAWQLGMFQAEPRLGML------YPESYERVPLWAHTWLSNFEV 238

Query: 275 ICTLAGRMGITFQDQK-LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
             TLA R+G      + +DF AG+MFW + +AL P+  L L     P+ H  +DG + HA
Sbjct: 239 CRTLAQRLGFDINASEYIDFPAGSMFWAKVDALRPLYALNLELKDFPEEHGQIDGTLHHA 298

Query: 334 VERCFSLSVKKANFRI 349
           +ER F   V+  ++RI
Sbjct: 299 MERMFVAVVRHQHYRI 314


>gi|289662624|ref|ZP_06484205.1| hypothetical protein XcampvN_05932 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 945

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 125/256 (48%), Gaps = 18/256 (7%)

Query: 102 ESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKS-- 159
           ++P    V    ++ K+ ++VH++Y DL  E A  L  + + +DL V+++  +A  ++  
Sbjct: 69  QAPFGRPVPSAQLQLKVGVMVHVFYPDLIDEFAQSLQQMPVGYDLLVSVMDNAAEAQARD 128

Query: 160 --EILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGD 217
               L+      I I+ N GRD+ P L+    EQ+   D V  +H KKS    Y+  E  
Sbjct: 129 RFSKLQQIEKLDIRIVPNRGRDIAPLLVTFR-EQILALDVVGHLHTKKSL---YTGSEQG 184

Query: 218 LWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTC---SLGKNREM 274
            WRR+L   L+G+   +   +  F     +GM+      YP  Y        +   N E+
Sbjct: 185 QWRRYLVSSLMGSAERIAWQLGMFQAEPRLGML------YPESYERVPLWAHTWLSNFEV 238

Query: 275 ICTLAGRMGITFQDQK-LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
             TLA R+G      + +DF AG+MFW + +AL P+  L L     P+ H  +DG + HA
Sbjct: 239 CRTLAQRLGFDINASEYIDFPAGSMFWAKVDALRPLYALNLELKDFPEEHGQIDGTLHHA 298

Query: 334 VERCFSLSVKKANFRI 349
           +ER F   V+  ++RI
Sbjct: 299 MERMFVAVVRHQHYRI 314


>gi|83950907|ref|ZP_00959640.1| hypothetical protein ISM_07395 [Roseovarius nubinhibens ISM]
 gi|83838806|gb|EAP78102.1| hypothetical protein ISM_07395 [Roseovarius nubinhibens ISM]
          Length = 752

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 17/252 (6%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV---TESASIKSEILKIFPAARIH 171
           KA+ A+  H+YY DLW E A     +    DL++TL     E+  +  EI + FP A + 
Sbjct: 130 KARFALHAHIYYPDLWPEFATRFDEIGDGIDLYITLTWRGEETRWLADEITERFPRAFVT 189

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
            + N GRD+LPFL+L        YD +CKIH KKS  +     +GD WRR L   +L A 
Sbjct: 190 PVPNRGRDILPFLLLANAGAFDGYDALCKIHTKKSPHRD----DGDQWRRHLIDGVLPAT 245

Query: 232 GVVFKIIRTF-DTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK 290
           G+  ++     D      +   +AY   + +       G NR+    +  R+ +      
Sbjct: 246 GLQERLQHFLADDAAAFWVADGQAYAARDWW-------GINRDKTAAVLRRVELDPLLDA 298

Query: 291 LDFFAGTMFWVRTEALDPIKNLRL-SRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRI 349
           L F AG+++W++   L  IK L L +  FEP+  + +DG + HAVER        A   I
Sbjct: 299 LRFPAGSIYWMKPLMLGMIKALDLDAPMFEPEKGQ-VDGTLAHAVERAIGGLALAAGQEI 357

Query: 350 SDVDCILGYRKS 361
            +   ++  R++
Sbjct: 358 RETAALMRPRRA 369


>gi|258591058|emb|CBE67353.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 1460

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 72/242 (29%), Positives = 125/242 (51%), Gaps = 16/242 (6%)

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA-SIKSEILKIFPAAR--- 169
           I ++IA+  H YY DL  E+A+ L N+  +FDL V++  + A  +  +     P AR   
Sbjct: 589 ISSRIAVHAHAYYPDLTKELASYLKNMPFAFDLFVSVSNDEARDVCRQAFAGLPQARRVI 648

Query: 170 IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
           + ++ N GRD+ P ++     +L+ YDY+C +H KKS    Y+  + D W  +L   L+G
Sbjct: 649 VDVVANRGRDIAP-MVCHFGGRLATYDYICHLHTKKSM---YAQGKMDGWLEYLLRQLMG 704

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT-FQD 288
           +   V +I   F +    G+I  + Y Y   + +   S   N+ +   +  +MGIT   +
Sbjct: 705 SEDQVRRIFSMFQSDPRAGIIYPQNYEYLPYWGNTWLS---NKALGAQMCRQMGITDVPE 761

Query: 289 QKLDFFAGTMFWVRTEALDPI--KNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
              D+ AG+MFW R+EA+  +   ++RL+ +  P+     DG + H +ER   L  + A 
Sbjct: 762 GYFDYPAGSMFWARSEAIRNLFSADIRLTDF--PEEAGQTDGSLAHCIERLLVLVARHAG 819

Query: 347 FR 348
           ++
Sbjct: 820 YK 821


>gi|310816773|ref|YP_003964737.1| lipopolysaccharide biosynthesis protein-like protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755508|gb|ADO43437.1| lipopolysaccharide biosynthesis protein-like protein
           [Ketogulonicigenium vulgare Y25]
          Length = 726

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 24/250 (9%)

Query: 102 ESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEI 161
           E+PA  +         I + +HLYY +L    A  L+ + +   L+V+  T++A   ++I
Sbjct: 459 EAPAPAR--------PIGVFLHLYYQELAPVFAKRLAQIPLPLSLYVS--TDTAEKAAQI 508

Query: 162 LKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRR 221
            +  P A++ ++ N GRD+ P L     +  +++D V  +HGKKS          D W  
Sbjct: 509 ERALPQAQVRVLPNRGRDIFPKLYGF-GDAYADHDIVLHLHGKKSLHSSML----DEWLS 563

Query: 222 WLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGR 281
            +   LLG P  V +I+  FD+   +G++    +R       +    G NR++   LA R
Sbjct: 564 HILDCLLGDPADVNRILSLFDSVPRLGIVMPVVHRSVLNAAHW----GFNRDIGAELAYR 619

Query: 282 MGITF---QDQKLDFFAGTMFWVRTEALDPIKNLRL-SRYFEPKVHKALDGEIEHAVERC 337
           MG+     ++  L F AG+MFW RT AL PI +L L + +F P+  + +DG + HAVER 
Sbjct: 620 MGMATPLPENDALQFPAGSMFWARTAALQPILDLALEASHFPPEAGQ-VDGTLAHAVERM 678

Query: 338 FSLSVKKANF 347
             +  +   +
Sbjct: 679 LGVVCRAGGY 688


>gi|134297301|ref|YP_001121036.1| lipopolysaccharide biosynthesis protein-like protein [Burkholderia
            vietnamiensis G4]
 gi|134140458|gb|ABO56201.1| Lipopolysaccharide biosynthesis protein-like protein [Burkholderia
            vietnamiensis G4]
          Length = 1231

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 120/243 (49%), Gaps = 12/243 (4%)

Query: 115  KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE-SASIKSEILKIFPAARIHIM 173
            K + A+V HLYY DL  E+ +L+   +++ D  +T+    S     EIL       +  +
Sbjct: 994  KNENALVAHLYYFDLLPELLSLIER-NVNLDAFITIPVHFSREQVGEILASLDNVYVLRV 1052

Query: 174  ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            +N GRD+LPFL +    +  +Y  + K+H KKS ++     +G L R+    +LL  P +
Sbjct: 1053 QNRGRDILPFLNIYPIIKSYSYANLVKVHSKKSPQRA----DGALLRKRALLELLD-PSI 1107

Query: 234  VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
            V  ++R  +T   IG+I            DY   L  NR+ +     R+G+       +F
Sbjct: 1108 VPGVLRALNTDPKIGLIAPSNSLCSLSNSDY---LINNRKQLNYCLSRLGLVDSSLNFEF 1164

Query: 294  FAGTMFWVRTEALDPIKNLRLSRY-FEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
             AG+MFW R +AL  + +L L    FE ++ + LDG + HA+ER F    K   +R   V
Sbjct: 1165 IAGSMFWARVDALRMLSDLSLREEDFEEELGQ-LDGTLAHAIERLFCFLGKHVGYRTLPV 1223

Query: 353  DCI 355
            D I
Sbjct: 1224 DQI 1226


>gi|325928537|ref|ZP_08189725.1| Lipopolysaccharide biosynthesis protein [Xanthomonas perforans
            91-118]
 gi|325541076|gb|EGD12630.1| Lipopolysaccharide biosynthesis protein [Xanthomonas perforans
            91-118]
          Length = 1415

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 127/249 (51%), Gaps = 15/249 (6%)

Query: 105  AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA-SIKSEILK 163
            A+ + +      ++A+V+H +Y ++  E+   L +  + + L ++ V + A  ++  +  
Sbjct: 1156 ALRRPVMPRTPERVAVVIHAFYPEILPEMLKELQSWDVPYFLIISTVADKADEVRGYLAD 1215

Query: 164  IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWL 223
            +   A + + EN GRD+LPFL +++ +       V K+H K+S  +     +G+ WRR +
Sbjct: 1216 LSVVADVRVFENRGRDILPFLEIMK-DLRGRESLVLKLHTKRSLHR----QDGESWRRDM 1270

Query: 224  FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
               LL AP V  +I   F     +G+     +         T   G N + +  L+ +M 
Sbjct: 1271 LEKLL-APKVASEIFAAFREQERLGLAAPEGH-----ILSMTTYWGANADTVHRLSKQMH 1324

Query: 284  ITFQDQKLDFFA-GTMFWVRTEALDPIKNLRLSRY-FEPKVHKALDGEIEHAVERCFSLS 341
            +   +     FA G+MF+VR EA+D I +L L R  FEP+  + +DG + HA+ERCFSL+
Sbjct: 1325 VDPVNPVTAMFAAGSMFYVRPEAIDSIMDLDLRREDFEPEAGQ-VDGTLAHAIERCFSLA 1383

Query: 342  VKKANFRIS 350
            V    + I+
Sbjct: 1384 VCSTGYYIA 1392


>gi|21109952|gb|AAM38419.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 296

 Score =  102 bits (254), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 21/244 (8%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E  + +++  +S  L VT  +T    ++  + +    A++   EN GR
Sbjct: 51  VVLHAWYLDVLDEALDAIADCGLSLRLVVTTDITMVEQVRQRLQQRGVQAQVDGFENRGR 110

Query: 179 DVLPFL-----ILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           D+LPFL     +L E EQ+     V K+H KKS  +     +GD WRR +F  LL  P  
Sbjct: 111 DILPFLRVANRLLDEGEQV-----VLKLHTKKSTHRE----DGDAWRREMFSALL-TPQH 160

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
              I+R F     +G+     +  P      T  +G N + +  LA R G    D+   F
Sbjct: 161 ADAIMRGFTDDPLLGLAAPAQHLLP-----VTDFIGGNADALDYLAVRTGTDAIDEHSVF 215

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVD 353
            +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V      ++ +D
Sbjct: 216 ASGSMFWVKLEALRPLLDANLHPSEFENEQGQIDGTLAHAIERFLAVAVSHCGHHVATID 275

Query: 354 CILG 357
            +LG
Sbjct: 276 QLLG 279


>gi|77748730|ref|NP_643883.2| hypothetical protein XAC3576 [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 546

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 21/250 (8%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E  + +++  +S  L VT  +T    ++  + +    A++   EN GR
Sbjct: 301 VVLHAWYLDVLDEALDAIADCGLSLRLVVTTDITMVEQVRQRLQQRGVQAQVDGFENRGR 360

Query: 179 DVLPFL-----ILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           D+LPFL     +L E EQ+     V K+H KKS  +     +GD WRR +F  LL  P  
Sbjct: 361 DILPFLRVANRLLDEGEQV-----VLKLHTKKSTHRE----DGDAWRREMFSALL-TPQH 410

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
              I+R F     +G+     +  P      T  +G N + +  LA R G    D+   F
Sbjct: 411 ADAIMRGFTDDPLLGLAAPAQHLLP-----VTDFIGGNADALDYLAVRTGTDAIDEHSVF 465

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVD 353
            +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V      ++ +D
Sbjct: 466 ASGSMFWVKLEALRPLLDANLHPSEFENEQGQIDGTLAHAIERFLAVAVSHCGHHVATID 525

Query: 354 CILGYRKSLS 363
            +LG  +  +
Sbjct: 526 QLLGIPQPTA 535


>gi|166713445|ref|ZP_02244652.1| hypothetical protein Xoryp_18900 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 695

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 21/250 (8%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E  + L++  +S  L VT  +T    ++  + +    A++   EN GR
Sbjct: 450 VVLHAWYLDVLDEALDALAHCGLSLRLVVTTDITMVTQVRQCLQQRGLQAQVEGFENRGR 509

Query: 179 DVLPFL-----ILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           D+LPFL     +L E EQ+     V K+H KKS  +     +GD WRR +   LL AP  
Sbjct: 510 DILPFLRVANRLLDEGEQV-----VLKLHTKKSTHRE----DGDTWRRDMLSGLL-APQH 559

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
           V  I+R F     +G++    +  P      T  +G N + +  L  R G    +    F
Sbjct: 560 VAAIVRGFAEDPLLGLVAPAQHLLP-----VTDFIGGNADALDYLTVRTGTDAINAHSLF 614

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVD 353
            +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V  +  R++ ++
Sbjct: 615 ASGSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFLAVAVAHSGQRVATIE 674

Query: 354 CILGYRKSLS 363
            +LG  K  +
Sbjct: 675 QLLGIPKPAT 684


>gi|58425017|gb|AAW74054.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 727

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 21/244 (8%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E  + L++  +S  L VT  +T    ++  + +    A++   EN GR
Sbjct: 482 VVLHAWYLDVLDEALDALAHCGLSLRLVVTTDITMVTQVRQCLQQRGLQAQVEGFENRGR 541

Query: 179 DVLPFL-----ILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           D+LPFL     +L E EQ+     V K+H KKS  +     +GD WRR +   LL AP  
Sbjct: 542 DILPFLRVANRLLDEGEQV-----VLKLHTKKSTHRE----DGDTWRRDMLSGLL-APQH 591

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
           V  I+R F     +G++    +  P      T  +G N + +  L  R G    +    F
Sbjct: 592 VAAIVRGFAEDPLLGLVAPAQHLLP-----VTDFMGGNADALDYLTVRTGTDAINAHSLF 646

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVD 353
            +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V  +  R++ ++
Sbjct: 647 ASGSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFLAVAVAHSGQRVATIE 706

Query: 354 CILG 357
            +LG
Sbjct: 707 QLLG 710


>gi|122879048|ref|YP_199439.6| hypothetical protein XOO0800 [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 546

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 21/250 (8%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E  + L++  +S  L VT  +T    ++  + +    A++   EN GR
Sbjct: 301 VVLHAWYLDVLDEALDALAHCGLSLRLVVTTDITMVTQVRQCLQQRGLQAQVEGFENRGR 360

Query: 179 DVLPFL-----ILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           D+LPFL     +L E EQ+     V K+H KKS  +     +GD WRR +   LL AP  
Sbjct: 361 DILPFLRVANRLLDEGEQV-----VLKLHTKKSTHRE----DGDTWRRDMLSGLL-APQH 410

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
           V  I+R F     +G++    +  P      T  +G N + +  L  R G    +    F
Sbjct: 411 VAAIVRGFAEDPLLGLVAPAQHLLP-----VTDFMGGNADALDYLTVRTGTDAINAHSLF 465

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVD 353
            +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V  +  R++ ++
Sbjct: 466 ASGSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFLAVAVAHSGQRVATIE 525

Query: 354 CILGYRKSLS 363
            +LG  +  +
Sbjct: 526 QLLGIPQPAT 535


>gi|325928558|ref|ZP_08189746.1| Lipopolysaccharide biosynthesis protein/putative glycosyl
           transferase [Xanthomonas perforans 91-118]
 gi|325541097|gb|EGD12651.1| Lipopolysaccharide biosynthesis protein/putative glycosyl
           transferase [Xanthomonas perforans 91-118]
          Length = 695

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 21/246 (8%)

Query: 118 IAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENH 176
           + +V+H +Y+D+  E    +++  +S  L +T  +T    ++  + +    A++   EN 
Sbjct: 448 VCVVLHAWYLDVLDEALEAIAHCGLSLRLVITTDITMVEQVRQRLQQRGVQAQVEGFENR 507

Query: 177 GRDVLPFL-----ILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
           GRD+LPFL     +L E EQ+     V K+H KKS  +     +GD WRR +F  LL AP
Sbjct: 508 GRDILPFLRVANRLLDEGEQV-----VLKLHTKKSTHRE----DGDTWRREMFSALL-AP 557

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKL 291
             V  I+R F     +G+     +  P      T  +G N + +  LA R G    ++  
Sbjct: 558 QHVDAIMRGFADDPLLGLAAPAQHLLP-----VTDFIGGNADALDYLAVRTGTDAINEHS 612

Query: 292 DFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISD 351
            F +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V      ++ 
Sbjct: 613 MFASGSMFWVKLEALRPLLDAHLHPSEFEDEQGQIDGTLAHAIERFLAVAVGHCGHHVAT 672

Query: 352 VDCILG 357
           V+ +LG
Sbjct: 673 VEQLLG 678


>gi|84622385|ref|YP_449757.1| hypothetical protein XOO_0728 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188578640|ref|YP_001915569.1| hypothetical protein PXO_03177 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|84366325|dbj|BAE67483.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188523092|gb|ACD61037.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 695

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 21/244 (8%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E  + L++  +S  L VT  +T    ++  + +    A++   EN GR
Sbjct: 450 VVLHAWYLDVLDEALDALAHCGLSLRLVVTTDITMVTQVRQCLQQRGLQAQVEGFENRGR 509

Query: 179 DVLPFL-----ILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           D+LPFL     +L E EQ+     V K+H KKS  +     +GD WRR +   LL AP  
Sbjct: 510 DILPFLRVANRLLDEGEQV-----VLKLHTKKSTHRE----DGDTWRRDMLSGLL-APQH 559

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
           V  I+R F     +G++    +  P      T  +G N + +  L  R G    +    F
Sbjct: 560 VAAIVRGFAEDPLLGLVAPAQHLLP-----VTDFMGGNADALDYLTVRTGTDAINAHSLF 614

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVD 353
            +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V  +  R++ ++
Sbjct: 615 ASGSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFLAVAVAHSGQRVATIE 674

Query: 354 CILG 357
            +LG
Sbjct: 675 QLLG 678


>gi|148556902|ref|YP_001264484.1| glycosyl transferase family protein [Sphingomonas wittichii RW1]
 gi|148502092|gb|ABQ70346.1| glycosyl transferase, family 2 [Sphingomonas wittichii RW1]
          Length = 1301

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 14/227 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVT-LVTESASIKSEILKIFPAARIHIMEN 175
           K A+V+HL+Y ++ +E+ + ++ +  S D+ VT  V    ++ + + ++   A +  + N
Sbjct: 2   KAALVLHLFYPEVAVELIDRVAAIGASVDIFVTHSVALDETVLAALDRLPRKAEVVTVAN 61

Query: 176 HGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVF 235
            G D+ P   LL       YD + K+H KK    GY+      WRR  +  ++G+P +V 
Sbjct: 62  RGWDIGPLFELLPLLAERGYDLIGKLHSKKGG-SGYA----PEWRRLAYDGMIGSPALVA 116

Query: 236 KIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRM-GITFQDQKLDFF 294
            I+  FD H D+ ++G++       Y      L +N E++  LA R+    +      FF
Sbjct: 117 DIVAAFDAHPDLSLLGAKPL-----YKSVASHLFRNAELLSDLAPRLTAPAYPPADWGFF 171

Query: 295 AGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLS 341
           AGT FW R   L+ +  L   R   P   +  DG + HAVER F L+
Sbjct: 172 AGTFFWARRTLLEKVAALADFRDAAPNQDR--DGALGHAVERLFGLA 216


>gi|296135664|ref|YP_003642906.1| glycosyl transferase family 2 [Thiomonas intermedia K12]
 gi|295795786|gb|ADG30576.1| glycosyl transferase family 2 [Thiomonas intermedia K12]
          Length = 1414

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 85/247 (34%), Positives = 118/247 (47%), Gaps = 29/247 (11%)

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGR 178
           A+++HLYY DLW E    L  L    D++V+L      + ++I++  P A +    N GR
Sbjct: 281 AVLLHLYYPDLWPEFLAHLKTLPAPCDVYVSLSEGREELLTDIVRDLPDAVVMRHPNKGR 340

Query: 179 DVLPFLILLETEQLSNYDYVCKIHGKKSKRKG---------YSWWEGDLWRRWLFYDLLG 229
           D+ P L LL   +  NY  +  +HGKKS                 +GD WRR L   LL 
Sbjct: 341 DIAPRLALLRLARAHNYKQLLFLHGKKSPHLKEVENIHIPFLQHKDGDRWRRELLAALLD 400

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----KNREMICTLAGRMGIT 285
           A     K I  F     +G+IG   +            LG     N   +   A RMGIT
Sbjct: 401 ASE---KTIAAFAQQPKLGLIGPHGFW-----------LGLRGDANFPRLSAQAQRMGIT 446

Query: 286 FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRY-FEPKVHKALDGEIEHAVERCFSLSVKK 344
               +  +FAG+MFW R +ALDP+  L L    FE +  +  DG + H VER F+LS +K
Sbjct: 447 PDPARHGYFAGSMFWCRPQALDPLLALDLKDADFEDETGQT-DGTLAHVVERLFALSAEK 505

Query: 345 ANFRISD 351
           A F+I+D
Sbjct: 506 AGFQIAD 512


>gi|192359986|ref|YP_001983898.1| Capsule polysaccharide biosynthesis protein family [Cellvibrio
           japonicus Ueda107]
 gi|190686151|gb|ACE83829.1| Capsule polysaccharide biosynthesis protein family [Cellvibrio
           japonicus Ueda107]
          Length = 872

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 111/236 (47%), Gaps = 28/236 (11%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKIFPAARIHIM 173
           + +IA+V HLYY DL  EI + L  +  +FDL VTL    +  I+  + + +P A  +  
Sbjct: 600 QKRIAVVAHLYYRDLVPEILSALETIPEAFDLIVTLPDWGTRHIEQMVREAYPEAVFYRA 659

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKS-KRKGYSWWE-GDLWRRWLFYDLLGAP 231
            N GRD+ PF+ LL      NYD + KI  K+   R G    + G LWR   F  LLG  
Sbjct: 660 VNRGRDIGPFVDLLPLITEKNYDALLKIQTKRGYYRSGRLLPQFGQLWRSETFRALLGNK 719

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAY-----RYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
             V  I+    T   + M+G   Y     +YP  Y D     G   + I       G   
Sbjct: 720 SRVTDILEALRTDPSLNMVGPSPYFLSLTKYP--YHDQ----GDLAQTILNNPTGNG--- 770

Query: 287 QDQKLDFFAGTMFWVRTEALDPI---KNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
                 FFAGTMFWVR   L P+   ++L ++  FEP+   A DG   H +ER FS
Sbjct: 771 ------FFAGTMFWVRPSCLRPLTEPEHLSIT-AFEPE-SGANDGATAHLIERLFS 818


>gi|295687882|ref|YP_003591575.1| rhamnan synthesis protein F [Caulobacter segnis ATCC 21756]
 gi|295429785|gb|ADG08957.1| Rhamnan synthesis F [Caulobacter segnis ATCC 21756]
          Length = 818

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIM 173
           +A    ++HL+Y +L    A  L+  +   DL +T+  T S +  +     FP A + I 
Sbjct: 588 RADAVTLLHLFYPELIDWFAERLAATADVLDLMITVPETWSEADLARARATFPMAHLAIA 647

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           EN GRD+ PF+  L   +   Y   CK+H K+S  +     +GD WR  L   LLG    
Sbjct: 648 ENRGRDIRPFVETLRRARTLGYSVFCKLHSKRSPHRA----KGDEWRAELVDGLLGGEAA 703

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
              +       + +G++ +   R      D    +  NR+    LA RMG+    +   F
Sbjct: 704 ALALRAFAQDAK-LGLLAAAGSRLRIGDPDV---MNNNRQDADRLARRMGLKLAPET-PF 758

Query: 294 FAGTMFWVRTEALDPIKNLRLSRY-FEPKVHKALDGEIEHAVERCFSLSVKKANFRIS 350
            AG+MFW RTEA  P+ +L  +   F P++ + +DG   HA+ER  +  V +A +R S
Sbjct: 759 SAGSMFWGRTEAFAPLSDLTDAEIDFGPELGR-VDGTTAHAIERLTAAIVARAGYRAS 815


>gi|148927812|ref|ZP_01811237.1| Lipopolysaccharide biosynthesis protein-like protein [candidate
           division TM7 genomosp. GTL1]
 gi|147886838|gb|EDK72383.1| Lipopolysaccharide biosynthesis protein-like protein [candidate
           division TM7 genomosp. GTL1]
          Length = 498

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 25/246 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIF-PAAR---IHI 172
           ++A+VVH++Y +L  EI +++ N+   FDL +T   E A   SE++  F P A    I +
Sbjct: 240 RLAVVVHIFYPELANEIYDVIKNIVEPFDLIITTPHEGAV--SELIDTFAPLASSVAIAL 297

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
            EN GRDV PFL +  +  L  YD V K+H KKS         G  W++ LF  L G   
Sbjct: 298 SENRGRDVGPFLAVHRSGLLERYDAVLKLHSKKSTYSD----SGQQWQQSLFRQLCGNSQ 353

Query: 233 VVFKIIRTFDTHRD--IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF---Q 287
           +V + +      RD   GM+G   Y     Y  +    G NR  +  L   +  T    +
Sbjct: 354 IVRRSVALL---RDGKTGMVGPHDY-----YLTHPHYWGANRPAVHKLLQSLTATPLKEE 405

Query: 288 DQKLDFFAGTMFWVRTEALDPIKNLRLSRY-FEPKVHKALDGEIEHAVERCFSLSVKKAN 346
           D  L FFAGTMFW   +A+  + ++  +   FE +  K  DG + HA+ER F +  +   
Sbjct: 406 DVPLRFFAGTMFWFAPKAIVALHDIPEALLNFESENGKQ-DGTLAHALERLFGIVPQLGG 464

Query: 347 FRISDV 352
           + ++ +
Sbjct: 465 YNVTSL 470


>gi|325915787|ref|ZP_08178089.1| Putative glycosyltransferase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538051|gb|EGD09745.1| Putative glycosyltransferase [Xanthomonas vesicatoria ATCC 35937]
          Length = 695

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 21/255 (8%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMEN 175
           +  +VVH +Y+D+  EI + L+       L VT  +T    ++  + +    A +   EN
Sbjct: 447 RACVVVHAWYLDVLDEILDALAPSVAMLRLIVTTDLTLVGQVRGRLQQHGIEAEVEGFEN 506

Query: 176 HGRDVLPFL-----ILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGA 230
            GRD+LPFL     +L E EQL     V K+H KKS  +     +GD WRR +   LLG 
Sbjct: 507 RGRDILPFLHIANRLLDEGEQL-----VVKLHTKKSTHRH----DGDAWRREMLAALLGG 557

Query: 231 PGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK 290
            G V  I+  F     +G+     +         T  +G N + +  LA R G     + 
Sbjct: 558 -GRVDAIVNAFVADPQLGLAAPAQH-----LLAVTDFIGGNADALDYLAVRTGTGTVTEH 611

Query: 291 LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRIS 350
             F +G+MFW + +AL P+ +  L           +DG + HA+ER    +V  +  RI+
Sbjct: 612 DRFASGSMFWAKLDALRPLLDAHLQPGDFEGEQGQIDGTLAHAIERFLGHAVLHSGHRIA 671

Query: 351 DVDCILGYRKSLSQN 365
            +D ++G R+  +  
Sbjct: 672 TIDGLMGQREPAAST 686


>gi|16124886|ref|NP_419450.1| hypothetical protein CC_0633 [Caulobacter crescentus CB15]
 gi|221233606|ref|YP_002516042.1| hypothetical protein CCNA_00669 [Caulobacter crescentus NA1000]
 gi|13421844|gb|AAK22618.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|51039815|tpg|DAA00361.1| TPA_exp: conserved hypothetical protein [Caulobacter vibrioides]
 gi|220962778|gb|ACL94134.1| hypothetical protein CCNA_00669 [Caulobacter crescentus NA1000]
          Length = 818

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 12/242 (4%)

Query: 111 QIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAAR 169
           Q A +A    ++HL+Y +L    A  L+  +   DL +T+  T S +  +     FP A 
Sbjct: 584 QFAKRADAVTLLHLFYPELIDWFAERLAATADVLDLMITVPETWSEADLARARAAFPTAH 643

Query: 170 IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
           + I EN GRD+ PF+  L   +   Y   CK+H K+S  +     +GD WR  L   LLG
Sbjct: 644 LAIAENRGRDIRPFVETLRRARALGYSVFCKLHSKRSPHQA----KGDQWRTTLVEGLLG 699

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ 289
                  +       + +G++ +   R      D    +  NR     L+  MG+  + +
Sbjct: 700 GEAAALALRAFAQDPK-LGLLAAAGARMRIGDPDV---MDNNRAEADRLSAHMGLKPRPE 755

Query: 290 KLDFFAGTMFWVRTEALDPIKNLRLSR-YFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
              F AG+MFW RTEA  P+ +L      F P++ + +DG   HA+ER  +  V++A +R
Sbjct: 756 T-PFAAGSMFWGRTEAFAPLTDLSDDEIAFGPELGR-VDGTTAHAIERLTAAIVERAGYR 813

Query: 349 IS 350
            S
Sbjct: 814 AS 815


>gi|315654770|ref|ZP_07907675.1| group 2 glycosyl transferase [Mobiluncus curtisii ATCC 51333]
 gi|315490731|gb|EFU80351.1| group 2 glycosyl transferase [Mobiluncus curtisii ATCC 51333]
          Length = 680

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 124/248 (50%), Gaps = 16/248 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSEILKIFPAAR---IH 171
           ++A+V+H+YY DL  EI   LSN+ + FD+ +T  + +    +  +I +  P  +   + 
Sbjct: 51  RLAVVMHVYYPDLVTEIVQRLSNIPVEFDMFITNASGADLPLLPQQIHERLPLLKHLVVV 110

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSK-RKGYSWWEGD--LWRRWLFYDLL 228
            +ENHGRD+ P + L+    L  Y  + K+H KKS  R+ +   EG    W+      LL
Sbjct: 111 PVENHGRDIFPLVQLVNFGALDPYQLILKVHTKKSAWRESHPDLEGSGAQWKDEFLDALL 170

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD 288
           G+   V KI+  F +   +G++ +       ++       G ++ +   L  R+ +  + 
Sbjct: 171 GSKDSVEKIMSAFGSDPWLGLVTAPGNIVGPQFW------GGDQALTAELLRRLEMQLKP 224

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRY-FEPKVHKALDGEIEHAVERCFSLSVKKANF 347
            KL F AG+M+WVR   +  +++L LS   FE +  + +D    HA+ER   +   +A  
Sbjct: 225 SKLKFAAGSMYWVRGFVIQGLRSLGLSATDFETEAGQ-IDATTAHALERAIGILTTEAGL 283

Query: 348 RISDVDCI 355
           ++ + + +
Sbjct: 284 KLRETNQL 291


>gi|315657309|ref|ZP_07910191.1| group 2 glycosyl transferase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315491781|gb|EFU81390.1| group 2 glycosyl transferase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 680

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 124/248 (50%), Gaps = 16/248 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSEILKIFPAAR---IH 171
           ++A+V+H+YY DL  EI   LSN+ + FD+ +T  + +    +  +I +  P  +   + 
Sbjct: 51  RLAVVMHVYYSDLVTEIVQRLSNIPVEFDMFITNASGADLPLLPQQIHERLPLLKHLVVV 110

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSK-RKGYSWWEGD--LWRRWLFYDLL 228
            +ENHGRD+ P + L+    L  Y  + K+H KKS  R+ +   EG    W+      LL
Sbjct: 111 PVENHGRDIFPLVQLVNFGALDPYQLILKVHTKKSAWRESHPDLEGSGAQWKDEFLDALL 170

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD 288
           G+   V KI+  F +   +G++ +       ++       G ++ +   L  R+ +  + 
Sbjct: 171 GSKDSVEKIMSAFGSDPWLGLVTAPGNIVGPQFW------GGDQALTAELLRRLEMQLKP 224

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRY-FEPKVHKALDGEIEHAVERCFSLSVKKANF 347
            KL F AG+M+WVR   +  +++L LS   FE +  + +D    HA+ER   +   +A  
Sbjct: 225 SKLKFAAGSMYWVRGFVIQGLRSLGLSATDFETEAGQ-IDATTAHALERAIGILTTEAGL 283

Query: 348 RISDVDCI 355
           ++ + + +
Sbjct: 284 KLRETNQL 291


>gi|188993121|ref|YP_001905131.1| conserved protein involved in carbohydrate biosynthesis
           [Xanthomonas campestris pv. campestris str. B100]
 gi|189030067|sp|B0RVK2|WXCX_XANCB RecName: Full=Uncharacterized protein wxcX
 gi|167734881|emb|CAP53093.1| conserved protein involved in carbohydrate biosynthesis
           [Xanthomonas campestris pv. campestris]
          Length = 695

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 13/246 (5%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E+ + +        + +T  +T+   +   I +    A +   EN GR
Sbjct: 450 VVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRRGIQAEVEGFENRGR 509

Query: 179 DVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKII 238
           D+LPFL +       N   V K+H KKS  +     +G+ WR  +   LLG P  V  I+
Sbjct: 510 DILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEMLTALLG-PQRVDAIV 564

Query: 239 RTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTM 298
             F T   +G+     +  P      T  +G N + +  L  R G    D    F +G+M
Sbjct: 565 NAFSTDPLVGLAAPEDHLLP-----VTEFIGGNADALDYLTVRTGSDAPDTNSLFASGSM 619

Query: 299 FWVRTEALDPIKNLRL-SRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILG 357
           FW R EAL P+ +  L +  FE +    +DG + HA+ER   L+V  +  R++ V+  LG
Sbjct: 620 FWARLEALRPLLDAHLHASEFESE-QGQIDGTLAHAIERFVGLAVTHSGHRVTTVEQTLG 678

Query: 358 YRKSLS 363
             K+ S
Sbjct: 679 ITKTPS 684


>gi|298346187|ref|YP_003718874.1| hypothetical protein HMPREF0573_11061 [Mobiluncus curtisii ATCC
           43063]
 gi|304390053|ref|ZP_07372007.1| group 2 glycosyl transferase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|298236248|gb|ADI67380.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
 gi|304326535|gb|EFL93779.1| group 2 glycosyl transferase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 680

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 123/248 (49%), Gaps = 16/248 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSEILKIFPAAR---IH 171
           ++A+V+H+YY DL  EI   LSN+ + FD+ +T  + +    +  +I +  P  +   + 
Sbjct: 51  RLAVVMHVYYPDLVTEIVQRLSNIPVEFDMFITNASGADLPLLPQQIHERLPLLKHLVVV 110

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSK-RKGYSWWEGD--LWRRWLFYDLL 228
            +ENHGRD+ P + L+    L  Y  + K+H KKS  R+ +   EG    W+      LL
Sbjct: 111 PVENHGRDIFPLVQLVNFGALDPYQLILKVHTKKSAWRENHPDLEGSGAQWKDEFLDALL 170

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD 288
           G+   V KI+  F     +G++ +       ++       G ++ +   L  R+ +  + 
Sbjct: 171 GSKDSVEKIMSAFGADPWLGLVTAPGNIVGPQFW------GGDQALTAELLRRLEMQLKP 224

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRY-FEPKVHKALDGEIEHAVERCFSLSVKKANF 347
            KL F AG+M+WVR   +  +++L LS   FE +  + +D    HA+ER   +   +A  
Sbjct: 225 SKLKFAAGSMYWVRGFVIQGLRSLGLSATDFETEAGQ-IDATTAHALERAIGILTTEAGL 283

Query: 348 RISDVDCI 355
           ++ + + +
Sbjct: 284 KLRETNQL 291


>gi|269219069|ref|ZP_06162923.1| glycosyl transferase, group 2 family [Actinomyces sp. oral taxon
           848 str. F0332]
 gi|269211216|gb|EEZ77556.1| glycosyl transferase, group 2 family [Actinomyces sp. oral taxon
           848 str. F0332]
          Length = 687

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 9/240 (3%)

Query: 112 IAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIH 171
           IA  ++IA+V+H +Y DL  E+ + L NL   FDL VT  + +     + L+    + + 
Sbjct: 71  IADPSRIAVVIHCFYADLMPELFDRLRNLPTDFDLFVTNASGADVAVPKDLERMRHSVVV 130

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSK-RKGYSWWEGD--LWRRWLFYDLL 228
            +ENHGRD+ P + L+ +  L  YD + K+H KKS  R+ ++  +G    W+     DL+
Sbjct: 131 EVENHGRDIFPTVQLVNSGILDPYDLILKLHTKKSPWREEHADLDGSGAAWKDQFLSDLV 190

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD 288
           G+   V +I+  F     +G++ +       ++       G ++ ++  L  R+ ++   
Sbjct: 191 GSREKVEEILNAFAADPTLGLVTAADSIVGKEFW------GGDQRIVEQLMLRIEMSIDP 244

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
            +L+F +G+M+W R   L  ++   L+     +    +D    HA+ER   +   +A  R
Sbjct: 245 DELEFASGSMYWTRAFVLQGLRAFNLTSADFDEEKGQVDATTAHAIERIVGIVTDEAGLR 304


>gi|77747764|ref|NP_636021.2| hypothetical protein XCC0629 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|77761299|ref|YP_244667.2| hypothetical protein XC_3605 [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 546

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 13/246 (5%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E+ + +        + +T  +T+   +   I +    A +   EN GR
Sbjct: 301 VVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRRGIQAEVEGFENRGR 360

Query: 179 DVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKII 238
           D+LPFL +       N   V K+H KKS  +     +G+ WR  +   LLG P  V  I+
Sbjct: 361 DILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEMLTALLG-PQRVDAIV 415

Query: 239 RTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTM 298
             F T    G+     +  P      T  +G N + +  L  R G    D    F +G+M
Sbjct: 416 NAFSTDPLAGLAAPEDHLLP-----VTEFIGGNADALDYLTVRTGSDAPDTNSLFASGSM 470

Query: 299 FWVRTEALDPIKNLRL-SRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILG 357
           FW R EAL P+ +  L +  FE +    +DG + HA+ER   L+V  +  R++ V+  LG
Sbjct: 471 FWARLEALRPLLDAHLHASEFESE-QGQIDGTLAHAIERFVGLAVTHSGHRVTTVEQTLG 529

Query: 358 YRKSLS 363
             K+ S
Sbjct: 530 ITKTPS 535


>gi|21111631|gb|AAM39945.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575237|gb|AAY50647.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 296

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 13/246 (5%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E+ + +        + +T  +T+   +   I +    A +   EN GR
Sbjct: 51  VVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRRGIQAEVEGFENRGR 110

Query: 179 DVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKII 238
           D+LPFL +       N   V K+H KKS  +     +G+ WR  +   LLG P  V  I+
Sbjct: 111 DILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEMLTALLG-PQRVDAIV 165

Query: 239 RTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTM 298
             F T    G+     +  P      T  +G N + +  L  R G    D    F +G+M
Sbjct: 166 NAFSTDPLAGLAAPEDHLLP-----VTEFIGGNADALDYLTVRTGSDAPDTNSLFASGSM 220

Query: 299 FWVRTEALDPIKNLRL-SRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILG 357
           FW R EAL P+ +  L +  FE +    +DG + HA+ER   L+V  +  R++ V+  LG
Sbjct: 221 FWARLEALRPLLDAHLHASEFESE-QGQIDGTLAHAIERFVGLAVTHSGHRVTTVEQTLG 279

Query: 358 YRKSLS 363
             K+ S
Sbjct: 280 ITKTPS 285


>gi|297538440|ref|YP_003674209.1| Rhamnan synthesis F [Methylotenera sp. 301]
 gi|297257787|gb|ADI29632.1| Rhamnan synthesis F [Methylotenera sp. 301]
          Length = 782

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 21/238 (8%)

Query: 118 IAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA-----ARIHI 172
           +A++ HL+Y  +  +    LSN+  +FD+++T  TE    K+ I K F         + +
Sbjct: 512 LAVICHLFYHQMCEDYKVYLSNIPFNFDIYITTDTEDK--KAYIEKSFSGWQRGKVEVRL 569

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P LI    +  S Y+Y+  IH K S    YS      WR ++   LLG+  
Sbjct: 570 AVNQGRDIAPKLIACR-DIYSAYEYILHIHSKNSP---YSSIHTG-WRDYILDTLLGSQK 624

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG--KNREMICTLAGRMGITF-QDQ 289
            V  I   F  + ++G+I       P  +      +G  +N ++   LAGRMG    +  
Sbjct: 625 TVSSIFEAFQLNSNLGIIA------PQHFKALKLDIGWDRNFKIAKKLAGRMGFDISRKA 678

Query: 290 KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
            +DF +G+MFW R+ AL P+ N  LS    P+     DG   H++ER +    +KA F
Sbjct: 679 PIDFPSGSMFWARSAALLPLLNCSLSLQDFPREDGQKDGTTAHSIERLYFFICEKAGF 736


>gi|189030068|sp|P0C7J1|WXCX_XANCP RecName: Full=Uncharacterized protein wxcX
          Length = 695

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 13/246 (5%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E+ + +        + +T  +T+   +   I +    A +   EN GR
Sbjct: 450 VVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRRGIQAEVEGFENRGR 509

Query: 179 DVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKII 238
           D+LPFL +       N   V K+H KKS  +     +G+ WR  +   LLG P  V  I+
Sbjct: 510 DILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEMLTALLG-PQRVDAIV 564

Query: 239 RTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTM 298
             F T    G+     +  P      T  +G N + +  L  R G    D    F +G+M
Sbjct: 565 NAFSTDPLAGLAAPEDHLLP-----VTEFIGGNADALDYLTVRTGSDAPDTNSLFASGSM 619

Query: 299 FWVRTEALDPIKNLRL-SRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILG 357
           FW R EAL P+ +  L +  FE +    +DG + HA+ER   L+V  +  R++ V+  LG
Sbjct: 620 FWARLEALRPLLDAHLHASEFESE-QGQIDGTLAHAIERFVGLAVTHSGHRVTTVEQTLG 678

Query: 358 YRKSLS 363
             K+ S
Sbjct: 679 ITKTPS 684


>gi|325921211|ref|ZP_08183074.1| lipopolysaccharide biosynthesis protein [Xanthomonas gardneri ATCC
           19865]
 gi|325548310|gb|EGD19301.1| lipopolysaccharide biosynthesis protein [Xanthomonas gardneri ATCC
           19865]
          Length = 706

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 11/250 (4%)

Query: 108 KVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFP 166
           KV+      ++ +V+H +Y+D+  E+ + +++ +IS  L +T  +T    ++  + +   
Sbjct: 431 KVVSELAPHRVCVVLHAWYLDVLDEMLDAVAHCAISPRLVITTDLTMVVEVRHRVQQRGM 490

Query: 167 AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYD 226
            A +   EN GRD+LPFL +           V K+H KKS  +     +GD WR  +   
Sbjct: 491 QAEVEGFENRGRDILPFLHVANRLLDEGVCLVVKLHTKKSTHRS----DGDTWRHEMLSA 546

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
           LL AP     I+  F +   +G+     +  P    D+   +G N + +  L  R G   
Sbjct: 547 LL-APERADAIVNAFSSDPLLGLAAPDGHLLP--VADF---IGGNTDALDYLGARTGTET 600

Query: 287 QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
             ++  F +G+MFW R EAL P+ +  L           +DG + HA+ER   +S  ++ 
Sbjct: 601 AIEQGMFASGSMFWARLEALRPLLDAHLHPSEFETEQGQIDGTLAHAIERFMGISAIQSG 660

Query: 347 FRISDVDCIL 356
           +RI+ +   L
Sbjct: 661 YRIATIGQAL 670


>gi|190572709|ref|YP_001970554.1| putative glycosyltransferase protein [Stenotrophomonas maltophilia
           K279a]
 gi|190010631|emb|CAQ44240.1| putative glycosyltransferase protein [Stenotrophomonas maltophilia
           K279a]
          Length = 707

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 111/254 (43%), Gaps = 11/254 (4%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE-SASIKSEILKIFPAARIH 171
           A  ++  IV+H +Y+D   E+   + +  +   L +T   E  A ++S I      A I 
Sbjct: 456 AAPSRPCIVIHAWYLDALPELLQAVKDSGLQARLVITTTGERQAQVQSIIDAEGLTAEIW 515

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
           + +NHGRDVLPFL   +     N   V K+H K+S  +      GD WRR +   LLG  
Sbjct: 516 VYDNHGRDVLPFLHAADRLLQQNESLVLKLHTKRSTHRD----NGDQWRREMVDALLGT- 570

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKL 291
                 +     +  IG++    +    K  DY   +G N + +  L   +G+       
Sbjct: 571 AQAAANLAHLLANPSIGLMAPAGHLL--KVADY---IGGNAQRMERLWALLGLDSAPGDG 625

Query: 292 DFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISD 351
            F +G+MFWVR  AL P+ +  L           +DG + HA+ER     V  A F ++D
Sbjct: 626 QFASGSMFWVRLPALRPLLDAHLLPSMFDTEAGQIDGTLAHAIERATGAVVSAAGFTVAD 685

Query: 352 VDCILGYRKSLSQN 365
              + G     S +
Sbjct: 686 TSEVEGAPPRASSS 699


>gi|32455988|ref|NP_861990.1| rb115 [Ruegeria sp. PR1b]
 gi|22726340|gb|AAN05136.1| RB115 [Ruegeria sp. PR1b]
          Length = 963

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 18/257 (7%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAA------ 168
           K ++ + +HLYY+D+  E+  LL+ L ++F+L ++L   +     E++ +F A       
Sbjct: 154 KGRLVVQLHLYYVDMAAEMIALLARLPVTFELLLSLPETAVVADEEMISLFRAGLERLGA 213

Query: 169 -RIHIMENHGRDVLPFLILLETE--QLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFY 225
             +  + N GRDV P+++   +E   L++ D V  +H KKS    Y       W R+L +
Sbjct: 214 ITLRRVPNRGRDVAPWMVSFRSELRALADRDLVLHLHSKKSPHGNYHVG----WGRYLGH 269

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT 285
            LLG+  V  +++  F    ++G++    +    +  +Y    GK  ++   L  RMG+ 
Sbjct: 270 SLLGSTAVAAQMLGLFAEDPELGLVAPAYWPALRRAPNY----GKVGDLCAHLFRRMGLG 325

Query: 286 FQDQK-LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
             D    DF AG+ F  R   L P   L L     P     + G + HAVER       +
Sbjct: 326 EVDPICADFPAGSFFCARAAVLRPFLTLGLEARDFPAEAGQICGTLAHAVERLLGQVPAR 385

Query: 345 ANFRISDVDCILGYRKS 361
              R   V   L + ++
Sbjct: 386 LGLRFDMVAVDLPFEEA 402


>gi|269978088|ref|ZP_06185038.1| lipopolysaccharide biosynthesis protein [Mobiluncus mulieris 28-1]
 gi|306818459|ref|ZP_07452182.1| rhamnan synthesis protein F [Mobiluncus mulieris ATCC 35239]
 gi|307700705|ref|ZP_07637730.1| rhamnan synthesis protein F [Mobiluncus mulieris FB024-16]
 gi|269933597|gb|EEZ90181.1| lipopolysaccharide biosynthesis protein [Mobiluncus mulieris 28-1]
 gi|304648632|gb|EFM45934.1| rhamnan synthesis protein F [Mobiluncus mulieris ATCC 35239]
 gi|307613700|gb|EFN92944.1| rhamnan synthesis protein F [Mobiluncus mulieris FB024-16]
          Length = 613

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 18/247 (7%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEIL 162
           A   V+    K +IA V H++Y D+  EI    S L     + +T  T  +   I+ ++ 
Sbjct: 285 AEESVLAANAKLRIAGVAHVFYADMTAEIMKRFSYLGDHAQIFLTTSTPEKKTQIEQQLQ 344

Query: 163 KIFPAARIHIME-NHGRDVLPFLIL-LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWR 220
            +   A + I+E N GRDV  FL+   +  +   +D V KIH KKS +  Y+    +L++
Sbjct: 345 TMGRQAEVRIVESNRGRDVSAFLVTCADVLEPGRFDVVAKIHSKKSAQDAYN--AAELFK 402

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----KNREMIC 276
           R LF +LL +PG    ++  F T   +GM+      +P        +LG     N++   
Sbjct: 403 RHLFENLLPSPGYTANLLHLFATEPYLGMV------FPPAVSLGYPTLGHAWFANKKPAL 456

Query: 277 TLAGRMGI--TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAV 334
            L  R+GI   F D       G+MF+ R EAL P+     +    P+  +  DG + H +
Sbjct: 457 ALCERLGIKLPFDDTTPLSPYGSMFFARPEALLPLTKAHFTFNDFPEEGQYSDGSLAHVI 516

Query: 335 ERCFSLS 341
           ER FS S
Sbjct: 517 ERIFSYS 523


>gi|225350704|ref|YP_002720664.1| putative glycosyl transferase, group 1 [Brachyspira hyodysenteriae
           WA1]
 gi|225216388|gb|ACN85121.1| putative glycosyl transferase, group 1 [Brachyspira hyodysenteriae
           WA1]
          Length = 342

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 14/240 (5%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAAR---I 170
           K KI I +HLYYID+       L +  I FDL +T    E+  I        P  +   I
Sbjct: 24  KLKIGIHIHLYYIDMMDMFIKYLKDSPIEFDLFITTSKEENKDICLNAFNKLPKLKNITI 83

Query: 171 HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGA 230
            I+EN GRD+ P+LI     Q +NYD  C +H KKS      W   + W  +L  +L+  
Sbjct: 84  FIVENIGRDIAPWLIECNNIQ-NNYDLFCHLHTKKS----LHWESINEWGEYLIENLISE 138

Query: 231 PGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK 290
             +   I+  F    +IG+I    Y Y   Y  Y      +   I  L  ++ I F+ + 
Sbjct: 139 EAIN-NILSNFILDNNIGIISPHIYYYLFPYILYIDK--DDMHHIKLLLNKLNINFEPKP 195

Query: 291 LDFF--AGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
            +F    G+M W R + L P+ +L L     P+      G I HA+ER   +  +++N++
Sbjct: 196 ENFVFPVGSMLWYRPKVLKPLFDLNLKYSDFPQEPIPKTGTIAHAIERIIGIICEQSNYK 255


>gi|298290915|ref|YP_003692854.1| Rhamnan synthesis F [Starkeya novella DSM 506]
 gi|296927426|gb|ADH88235.1| Rhamnan synthesis F [Starkeya novella DSM 506]
          Length = 633

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 22/261 (8%)

Query: 101 WESPAMGK-VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKS 159
           W  P  G     +A   K+ +  H +Y DL  E+   L+  +   DL +T  T +   K 
Sbjct: 378 WAVPVFGPPAAPVASPLKVGLHGHFFYPDLLPELLERLAANASRPDLFLTTDTPA---KV 434

Query: 160 EILKIFPAA-----RIHIMENHGRDVLPFLILL-ETEQLSNYDYVCKIHGKKSKRKGYSW 213
           E L+   AA     RI ++ N GRD+ PFL  L +      YD +  +HGKK+K  G   
Sbjct: 435 EQLRALTAAWPAKVRIDVVPNSGRDIGPFLTALRDVLTGGEYDVLLHLHGKKTK--GRRR 492

Query: 214 WEGDLWRRWLFYDLLGAPGVVFKIIRTF-DTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR 272
             GD WR +L+ +L+G    +   +  +   H  +G++      YP     +     +N 
Sbjct: 493 AIGDPWRNFLWENLIGGDHPMLDAVLAYMAAHPQVGLV------YPEDT--HLLDWARNG 544

Query: 273 EMICTLAGRMGIT-FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIE 331
            ++  L   MG+T      +DF  G MF VR  AL P+  L L     P     LDG + 
Sbjct: 545 RVVEELRRDMGLTEPMGTYVDFPVGNMFAVRPAALAPVLALDLKWSDYPVEPIPLDGTVL 604

Query: 332 HAVERCFSLSVKKANFRISDV 352
           H +ER     V+KA F  + V
Sbjct: 605 HGIERLLPTVVRKAGFTTAAV 625


>gi|285019449|ref|YP_003377160.1| hypothetical protein XALc_2689 [Xanthomonas albilineans GPE PC73]
 gi|283474667|emb|CBA17166.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 686

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 114/243 (46%), Gaps = 20/243 (8%)

Query: 121 VVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILK--IFPAARIHIMENHGR 178
           +VH +Y ++  E+ N L+  ++ + L VT   + AS     L+   FP   + ++EN GR
Sbjct: 442 IVHAWYPNVLPELLNPLAASALPWRLLVTTSPDQASAVQAQLRDCSFPY-EVMVLENRGR 500

Query: 179 DVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKII 238
           D+LPFL   E       D V K+H K+S         GD WR  L   L GA     +I+
Sbjct: 501 DILPFLHAGERLLQDGVDVVLKLHTKRSTHLH----NGDAWRSELLQRLAGA-DRAARIL 555

Query: 239 RTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLD---FFA 295
             F     +G++    +  P    D+    G NR     L  R G T  D  LD   F +
Sbjct: 556 EAFAQDPMLGLVAPEGHLLP--LADF---WGGNRMAADYLLRRTGYT--DVCLDEAHFIS 608

Query: 296 GTMFWVRTEALDPIKNLRL-SRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDC 354
           G+MFWVR  AL P+ +  L    FEP+    +DG + HA ER  +L  +   +R++    
Sbjct: 609 GSMFWVRLHALRPLLDSHLCPSEFEPE-QGQIDGTLAHAAERVTALLAQHRGYRVATAAE 667

Query: 355 ILG 357
           ++G
Sbjct: 668 LIG 670


>gi|227875198|ref|ZP_03993340.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Mobiluncus mulieris
           ATCC 35243]
 gi|227844103|gb|EEJ54270.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Mobiluncus mulieris
           ATCC 35243]
          Length = 613

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 18/247 (7%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEIL 162
           A   V+    K +IA V H++Y D+  EI    S L     + +T  T  +   I+ ++ 
Sbjct: 285 AEESVLAANAKLRIAGVAHVFYADMTAEIMKRFSYLGDHAQIFLTTSTPEKKTQIEQQLQ 344

Query: 163 KIFPAARIHIME-NHGRDVLPFLIL-LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWR 220
            +   A + I+E N GRDV  FL+   +  +   +D V KIH KKS +  Y+    +L++
Sbjct: 345 TMGRQAEVRIVESNRGRDVSAFLVTCADVLEPGCFDVVAKIHSKKSAQDAYN--AAELFK 402

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----KNREMIC 276
           R LF +LL +PG    ++  F T   +GM+      +P        +LG     N++   
Sbjct: 403 RHLFENLLPSPGYTANLLHLFATEPYLGMV------FPPAVSLGYPTLGHAWFANKKPAL 456

Query: 277 TLAGRMGI--TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAV 334
            L  R+GI   F D       G+MF+ R EAL P+     +    P+  +  DG + H +
Sbjct: 457 ALCERLGIKLPFDDTTPLSPYGSMFFARPEALLPLTKAHFTFNDFPEEGQYSDGSLAHVI 516

Query: 335 ERCFSLS 341
           ER FS S
Sbjct: 517 ERIFSYS 523


>gi|90425670|ref|YP_534040.1| glycosyl transferase, group 1 [Rhodopseudomonas palustris BisB18]
 gi|90107684|gb|ABD89721.1| glycosyl transferase, group 1 [Rhodopseudomonas palustris BisB18]
          Length = 846

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 112/240 (46%), Gaps = 16/240 (6%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIH 171
           A + +IAI  H YY DL      L++  + S DL +T    E A+   + L+ F      
Sbjct: 592 AARPRIAIHGHFYYPDLLESFLKLIAANASSVDLFLTTSGPEQAAQIRKSLRAFGIQNAD 651

Query: 172 I--MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
           +  + N GRD+ PFL  +  ++L +YD V   HGK+SK    +   GD WR + +  L+G
Sbjct: 652 VWSVPNRGRDIGPFLKEM-PDKLGSYDIVGHFHGKRSKHVDSTV--GDQWRDFAWQHLIG 708

Query: 230 APGVVFKIIR-TFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQ- 287
               +  +I   F     +G++ +           Y     +NR++   LA RM I    
Sbjct: 709 DAFPMIDVIADAFAEDAKLGLVFAED--------PYLNGWDENRDLAERLAQRMKIEAPL 760

Query: 288 DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
            +  DF  GTMFW R  AL P+  L L     P     +DG I HA+ER    +V+K+ F
Sbjct: 761 PEHFDFPIGTMFWARVAALQPLFQLNLDWNDYPHEPLPIDGTILHALERIVPFAVQKSGF 820


>gi|261868364|ref|YP_003256286.1| lipopolysaccharide biosynthesis protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|3132260|dbj|BAA28137.1| unnamed protein product [Actinobacillus actinomycetemcomitans]
 gi|261413696|gb|ACX83067.1| lipopolysaccharide biosynthesis protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 632

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 25/256 (9%)

Query: 107 GKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE---ILK 163
            KV ++    KI +V H+YY D+  EI +   N+  S+DL +T   E + ++ E   ILK
Sbjct: 285 SKVEKVRSDIKILVVAHIYYSDMLDEIISYTQNIPCSYDLLITTANEKSKLEIESNPILK 344

Query: 164 IFPAARIHIM---ENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLW 219
           +  A  I++    +N GRD+    I  + E +S  YD+VC++H KKS +  ++      +
Sbjct: 345 MSGAKGINVKVVEQNRGRDMSSLFITCKQEIISERYDWVCRLHSKKSPQNSHNM--SIHF 402

Query: 220 RRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----KNREMI 275
           +  ++ ++L     + K+I   D ++ IG      +  P+       +LG     NR++ 
Sbjct: 403 KEMMYLNILKDKAYISKVINYLDKNKSIG------FAMPSMVHIGHPTLGHAWFTNRDLA 456

Query: 276 CTLAGRMGITFQDQKLDFFA--GTMFWVRTEALDPI--KNLRLSRYFEPKVHKALDGEIE 331
             +A R+GI      +  FA  GTMFW R EAL  +   N +   + +  +H+  D  + 
Sbjct: 457 IKIAERVGIKLPFDDISPFAAYGTMFWFRPEALKKLFEYNWKFEDFNKEPMHQ--DSSLA 514

Query: 332 HAVERCFSLSVKKANF 347
           H +ER    +   A +
Sbjct: 515 HILERLLVYAAHDAGY 530


>gi|222148479|ref|YP_002549436.1| hypothetical protein Avi_2007 [Agrobacterium vitis S4]
 gi|221735467|gb|ACM36430.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 513

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 123/249 (49%), Gaps = 30/249 (12%)

Query: 112 IAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES-ASIKSEILKIFPAAR- 169
           +A++  + I VH +Y++L+ EIA+ L  L++ F L VT+  ES A +   +L  F   + 
Sbjct: 251 VALQLSLCIHVHCFYVELFNEIADRLQCLTLPFYLVVTVCNESDAKVVENLLVDFNQRQN 310

Query: 170 --IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDL 227
             I ++EN GRD+ PFLI   +      D V  +H KKS     +W  GD WRR+LF   
Sbjct: 311 THILVVENRGRDIAPFLI-DASPIWRKSDLVLHLHTKKSPH--ITW--GDNWRRYLFDQT 365

Query: 228 LGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYC--DYTCSLGKNREMICTLAGRMGIT 285
           +G   ++  II  F    D+GM+      YP  +C   +     KN++ I  +A ++ + 
Sbjct: 366 IGYEPLLKGIIDQFQDRDDMGMM------YPENFCMIKHFTEEEKNKDAIRYIAQKLRLE 419

Query: 286 FQDQKLD-FFAGTMFWVRTEAL------DPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
              + L  + AG+M + R +AL      D ++NL     F P+    LDG   H +ER  
Sbjct: 420 CSFEALGAYAAGSMAFYRVKALASVLEYDALENL-----FGPE-QGQLDGTAAHVLERLL 473

Query: 339 SLSVKKANF 347
              V+   F
Sbjct: 474 PEMVRLNGF 482


>gi|302337197|ref|YP_003802403.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
 gi|301634382|gb|ADK79809.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
          Length = 1100

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 138/309 (44%), Gaps = 44/309 (14%)

Query: 42  FWTLFYKRS-----KKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQ 96
           F TLFY RS     +K      + +  G R G +     N +M+ER+  F    +  FP 
Sbjct: 128 FDTLFYLRSYPDVAEKGVNPLGHYIKIGWRKGNR----PNPFMVERDCTF----LPAFPL 179

Query: 97  LLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESA 155
             H   S              I +V H+Y+ DL       +S++   FDL VT  + E+ 
Sbjct: 180 QDHSALS--------------IVVVFHIYHEDLVGSCLQYISHIPYPFDLIVTTPLEENN 225

Query: 156 SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWE 215
               ++  ++P A I   +N GRD+ PFL + +  ++  YD  CK+H KK     YS   
Sbjct: 226 DAILQVKSLYPDAEIVRSKNAGRDIGPFLQVWD--RVLQYDLCCKVHTKKGN-SAYS--- 279

Query: 216 GDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMI 275
            ++WR      +L     V  I+R F+    + + G+        Y  Y   LGKN+++ 
Sbjct: 280 -EIWRDLSLRGILETVDTVHGILRMFEQEDSLALAGAELL-----YGSYQFLLGKNKDLS 333

Query: 276 CTLAGRMGITFQDQKLD-FFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAV 334
            +L     I       + FF GTMFW+R +    + NL+  ++  P      DG+ EHA+
Sbjct: 334 NSLIKDYNIPVNSYSNNGFFMGTMFWMRVKKFIFLSNLKQLQF--PIEDGKNDGKYEHAL 391

Query: 335 ERCF-SLSV 342
           ER   SLS+
Sbjct: 392 ERLLGSLSL 400


>gi|323138318|ref|ZP_08073389.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
 gi|322396401|gb|EFX98931.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
          Length = 754

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 17/243 (6%)

Query: 111 QIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHV-TLVTESASIKSEILKIFP--A 167
            I +   +A +VH +Y DL   I   L N+  + DL++ T   E A I  ++++ +   +
Sbjct: 364 DINMDKPVAAIVHAFYPDLLEHILGYLENIPCAVDLYISTDSAEKAEIIGKVVRNWSKGS 423

Query: 168 ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDL 227
             + IMEN GRD+ P ++    +  + +D    +H K+S   G   +    WR +L   L
Sbjct: 424 TDVRIMENRGRDIAPMIVGFR-DVFAKHDIFLHVHTKRSPHAGDLLYH---WRDYLLNTL 479

Query: 228 LGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL--GKNREMICTLAGRMGIT 285
            G   +   ++  F+  + IG++      +P  + +    L  G + ++   L  R+G+ 
Sbjct: 480 FGTGDIARSVLSLFNDPK-IGVV------FPQHFFEVRRMLNWGFDYDLARNLLARVGVQ 532

Query: 286 F-QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
             +D  L+F +G+MFW RT+A+ P+ +L L     P+    +DG + HA+ER   +  + 
Sbjct: 533 LNKDLVLEFPSGSMFWGRTDAIRPLLDLDLQFSDFPEEAGQIDGTLAHAIERTLLMVAES 592

Query: 345 ANF 347
             +
Sbjct: 593 KGY 595


>gi|317047360|ref|YP_004115008.1| family 2 glycosyl transferase [Pantoea sp. At-9b]
 gi|316948977|gb|ADU68452.1| glycosyl transferase family 2 [Pantoea sp. At-9b]
          Length = 1419

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 31/235 (13%)

Query: 118 IAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL------VTESASIKSEILKIFPAARIH 171
           I + +HLYY+DL  E    L+ +   FDL ++L      V E        +K      + 
Sbjct: 599 IGVHLHLYYVDLADEFIKHLNTIPTGFDLFISLPRGKHNVEECERKFRSGIKTLKKLVVR 658

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR---KGYSWWEGDLWRRWLFYDLL 228
             EN GRD+ PF++    E LS Y+ +  IH KKS +   KG        WRR+L +  L
Sbjct: 659 ETENKGRDIYPFIVEFGAELLS-YELILHIHSKKSPQALSKG--------WRRFLLHYTL 709

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYT--CSLGKNREMICTLAGRMGITF 286
           G   +  +I+ +FD    +G++      +P  +   T   + G NRE++     R+G ++
Sbjct: 710 GTESITTQILNSFDNDPKLGVL------FPAYFYGVTRQPNWGGNREIVKQQLARLGFSY 763

Query: 287 QDQKL-DFFAGTMFWVRTEALDPIKN--LRLSRYFEPKVHKALDGEIEHAVERCF 338
                 D+ AG+ FW R++AL P+ N   RL  + E       DG + H  ER F
Sbjct: 764 DMTYCPDYPAGSFFWSRSDALRPLLNGEYRLEDFDEEAGQ--YDGTLAHGFERLF 816


>gi|220924211|ref|YP_002499513.1| Lipopolysaccharide biosynthesis protein-like protein
           [Methylobacterium nodulans ORS 2060]
 gi|219948818|gb|ACL59210.1| Lipopolysaccharide biosynthesis protein-like protein
           [Methylobacterium nodulans ORS 2060]
          Length = 1366

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 18/256 (7%)

Query: 112 IAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIK-SEILKIFPAAR- 169
           + +  ++A++ H++Y D   E++  L+ +    DL ++  TE    + +  L+ +   + 
Sbjct: 697 LELPERVAVIAHVFYTDFCSELSAYLARIPTQADLFISTDTEDKRQQIAFALQSYNMGKL 756

Query: 170 -IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
            + +M N GRD+ P L+  + +  ++Y+Y   IH KKS            WR +L  +LL
Sbjct: 757 TVRVMPNIGRDIAPMLVGFD-DVFNSYEYFLHIHSKKSPHDP----AFGSWREFLLENLL 811

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF-Q 287
           G+  ++  I+     H+  G++ S+ +    +   +  + G N E +  L GR GI    
Sbjct: 812 GSEDIIRSILYLLHAHK-TGIVFSQHF----EPVRHLLNFGYNFETMKGLLGRCGIKISN 866

Query: 288 DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
           D  L+F + + FW R+ AL P+ +L L           +DG + HA+ER     V+K+ F
Sbjct: 867 DLVLEFPSSSFFWGRSSALKPLLDLNLDWSDFAAEAGQIDGTLAHAIERSVLYIVEKSGF 926

Query: 348 RISDVDCILGYRKSLS 363
           R + V    G+R  L 
Sbjct: 927 RWAKV----GHRSKLP 938


>gi|160894491|ref|ZP_02075267.1| hypothetical protein CLOL250_02043 [Clostridium sp. L2-50]
 gi|156863802|gb|EDO57233.1| hypothetical protein CLOL250_02043 [Clostridium sp. L2-50]
          Length = 646

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 125/262 (47%), Gaps = 38/262 (14%)

Query: 107 GKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP 166
            K+ +I  K K+A+V+HLY+ DL  +     SN+    D+++T  T++   K  ILK+F 
Sbjct: 304 NKMDEILKKRKLALVMHLYFPDLVEDSFQWASNVPKETDVYIT--TDTVEKKEAILKVFK 361

Query: 167 A-----ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK---------GYS 212
                   + ++ N GRDV   L+ ++ + + NYDY C +H KK+ +          GY 
Sbjct: 362 NLPCNHLEVRVIVNRGRDVSSILVGVK-DVIQNYDYACFVHDKKTAQAKPGSVGDSFGYK 420

Query: 213 WWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY----CDYTCSL 268
            W   L+ +            V  +++TF+ +  +G++      +   Y     ++ C+ 
Sbjct: 421 CWNNTLYNKEF----------VCNVLQTFEDNERLGILSPPEPNHGPFYQTLGNEWGCNF 470

Query: 269 GKNREMICTLAGRMGITF---QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKA 325
            K+RE    +A ++GIT    +D++     GT FW R  AL  + +        P+    
Sbjct: 471 EKSRE----VADKLGITIPMSEDKEALAPYGTFFWFRPTALKVLFDHDWQYEEFPEEPNN 526

Query: 326 LDGEIEHAVERCFSLSVKKANF 347
            DG I HA+ER + + V++A +
Sbjct: 527 FDGTILHAIERLYPICVQQAGY 548


>gi|194364297|ref|YP_002026907.1| hypothetical protein Smal_0519 [Stenotrophomonas maltophilia
           R551-3]
 gi|194347101|gb|ACF50224.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 686

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 13/245 (5%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE-SASIKSEILKIFPAARIHIM 173
            ++  +V+H +++D   E+ + + +  +   L +T  ++  A ++S        A I   
Sbjct: 437 PSRPCVVIHAWHLDALPELLSAVKDSGLPARLVITTTSDRQAQVQSITESHGLPAEIWAY 496

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           +NHGRD+LPFL   +     N   V K+H K+S  +      GD WRR +   LLG P  
Sbjct: 497 DNHGRDILPFLHAADRLLQQNESLVLKLHTKRSTHRD----NGDQWRREMVDALLG-PAQ 551

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
               +        +G++    +       DY   +G N + +  L  ++G+        F
Sbjct: 552 AAANLAHLQADPRLGLMAPAGHLL--NVADY---IGGNAQRMERLWAQLGLDGAPGDGQF 606

Query: 294 FAGTMFWVRTEALDPIKNLR-LSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
            +G+MFWVR +AL P+ +   L   FE +  + +DG + HA+ER        A F + D 
Sbjct: 607 ASGSMFWVRLQALRPLLDAHLLPSMFEVEAGQ-IDGTLAHAIERATGAVATCAGFSVGDT 665

Query: 353 DCILG 357
             + G
Sbjct: 666 SQVHG 670


>gi|332995244|gb|AEF05299.1| hypothetical protein ambt_19030 [Alteromonas sp. SN2]
          Length = 638

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 17/241 (7%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA------A 168
           + K+AIV+H++Y D   + A  +     + D+ +T  T+  +IK++ LK F         
Sbjct: 131 QQKVAIVLHIFYPDFVDKFAASVQRFPTNVDVFITAGTD--AIKNKALKTFNGLKNVQKV 188

Query: 169 RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
           +  + EN GR+  PFL+   +++L +YD +C +H KKS    YS  E   W  +    LL
Sbjct: 189 QAVLCENRGRNFGPFLVNF-SDELLDYDLMCHLHSKKSL---YSGREQTQWFDYQNNFLL 244

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAY-RYPNKYCDYTCSLGKNREMICTLAGRMGITFQ 287
               VV  I+R FD   ++G+    ++   P     +TC+ G +++ +     + G+   
Sbjct: 245 KDKHVVKSILRLFDEREELGIYYPTSFWMMPAWVNHWTCNKGISQDFV----DKWGLDIS 300

Query: 288 DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
           D  +++  G MFW R +A+ P+   +      P+     DG   HA+ER   L  +K  F
Sbjct: 301 DDFVNYPVGGMFWARPKAIAPLLKEKFEYSDFPEEPLPNDGSWLHALERSIGLLAEKQGF 360

Query: 348 R 348
           +
Sbjct: 361 K 361


>gi|30024633|dbj|BAC75688.1| rhamnosyltransferase [Streptococcus mutans]
          Length = 583

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 38/241 (15%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           K+A+ +H++Y+DL  E          S+DL +T  T+S   K+EI ++  A    A+I +
Sbjct: 285 KVAVHLHVFYVDLLEEFLTAFKQFHFSYDLFIT--TDSDDKKAEIEEVLSANSQEAQIFV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L     LS YD+V   H KKSK   +  W G  WR  L  D+L  P 
Sbjct: 343 TGNIGRDVLPMLKL--KNYLSTYDFVGHFHTKKSKEADF--WAGQSWREELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMIC----TLAGRMGIT 285
               I+     +  IG++ +     +RY NK  D       N  +I     TL  +MG+T
Sbjct: 398 D--NILAQLQQNPKIGLVIADMPTFFRY-NKIVD-----AWNEHLIAPEMNTLWQKMGMT 449

Query: 286 FQDQKLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
              +K+DF A        GT  W + +AL P+ +L L+    P+        I HA+ER 
Sbjct: 450 ---KKIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPE-EPLPQNSILHAIERL 505

Query: 338 F 338
            
Sbjct: 506 L 506


>gi|30024644|dbj|BAC75698.1| rhamnosyltransferase [Streptococcus mutans]
          Length = 583

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 38/241 (15%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           K+A+ +H++Y+DL  E          S+DL +T  T+S   K+EI +I  A    A++ +
Sbjct: 285 KVAVHLHVFYVDLLEEFLTAFKQFHFSYDLFIT--TDSDDKKAEIEEILSANSQEAQVFV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L     LS YD+V   H KKSK   +  W G  WR  L  D+L  P 
Sbjct: 343 TGNIGRDVLPMLKL--KNYLSTYDFVGHFHTKKSKEADF--WAGQSWREELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMIC----TLAGRMGIT 285
               I+     +  IG++ +     +RY NK  D       N  +I     TL  +MG+T
Sbjct: 398 D--NILAQLQQNPKIGLVIADMPTFFRY-NKIVD-----AWNEHLIAPEMNTLWQKMGMT 449

Query: 286 FQDQKLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
              +K+DF A        GT  W + +AL P+ +L L+    P+        I HA+ER 
Sbjct: 450 ---KKIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPE-EPLPQNSILHAIERL 505

Query: 338 F 338
            
Sbjct: 506 L 506


>gi|82703518|ref|YP_413084.1| glycosyl transferase, group 1 [Nitrosospira multiformis ATCC 25196]
 gi|82411583|gb|ABB75692.1| Glycosyl transferase, group 1 [Nitrosospira multiformis ATCC 25196]
          Length = 828

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 110/236 (46%), Gaps = 13/236 (5%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIK-SEILKIFPA--ARIHIM 173
           ++A+ +H+YY +L+ EI   L   ++  DL +++ TE    + + +L  +P     I I+
Sbjct: 591 RVALHLHVYYSELFPEIMARLKVNNVRPDLFISVPTECTRNEVTGLLNDYPGKVVDIQIV 650

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L    +  L +YD +  +H KK+         G  W  +L  +LLG    
Sbjct: 651 PNRGRDIGPLLTAFGSVFLDDYDAIGHLHTKKTADLSDEMI-GKRWYTFLLENLLGGKRN 709

Query: 234 VFKII-RTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLD 292
           +  II         IG++      +P+    +    G N+    +LA ++G+    +   
Sbjct: 710 MADIILGRMTADPAIGIV------FPDD--PHVFDWGNNKAHADSLASKLGLGKLQENFV 761

Query: 293 FFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
           F  GTMFW RTEAL P+  L LS    P      DG I HA+ER   L   K + R
Sbjct: 762 FPMGTMFWARTEALRPLFTLDLSWQDYPAEPLPYDGTILHALERLLPLIAAKQSTR 817


>gi|290580710|ref|YP_003485102.1| rhamnan synthesis protein F [Streptococcus mutans NN2025]
 gi|254997609|dbj|BAH88210.1| RgpFc protein [Streptococcus mutans NN2025]
          Length = 557

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 113/237 (47%), Gaps = 30/237 (12%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           K+A+ +H++Y+DL  E          S+DL +T  T+S   K+EI +I  A    A++ +
Sbjct: 259 KVAVHLHVFYVDLLEEFLTAFKQFHFSYDLFIT--TDSDDKKAEIEEILSANSQEAQVFV 316

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L     LS YD+V   H KKSK   +  W G  WR  L  D+L  P 
Sbjct: 317 TGNIGRDVLPMLKL--KNYLSAYDFVGHFHTKKSKEADF--WAGQSWREELI-DMLVKPA 371

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ 289
               I+     +  IG++ +     +RY NK  D         EM  TL  +MG+T   +
Sbjct: 372 D--NILAQLQQNPKIGLVIADMPTFFRY-NKIVDAWNEHLIAPEM-NTLWQKMGMT---K 424

Query: 290 KLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           K+DF A        GT  W + +AL P+ +L L+    P+        I HA+ER  
Sbjct: 425 KIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPE-EPLPQNSILHAIERLL 480


>gi|3399709|dbj|BAA32094.1| rgpFc [Streptococcus mutans]
          Length = 583

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 38/241 (15%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           K+A+ +H++Y+DL  E          S+DL +T  T+S   K+EI +I  A    A++ +
Sbjct: 285 KVAVHLHVFYVDLLEEFLTAFKQFHFSYDLFIT--TDSDDKKAEIEEILSANGQEAQVFV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L     LS YD+V   H KKSK   +  W G  WR  L  D+L  P 
Sbjct: 343 TGNIGRDVLPMLKL--KNYLSAYDFVGHFHTKKSKEADF--WAGQSWREELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMIC----TLAGRMGIT 285
               I+     +  IG++ +     +RY NK  D       N  +I     TL  +MG+T
Sbjct: 398 D--NILAQLQQNPKIGLVIADMPTFFRY-NKIVD-----AWNEHLIAPEMNTLWQKMGMT 449

Query: 286 FQDQKLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
              +K+DF A        GT  W + +AL P+ +L L+    P+        I HA+ER 
Sbjct: 450 ---KKIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPE-EPLPQNSILHAIERL 505

Query: 338 F 338
            
Sbjct: 506 L 506


>gi|221634514|ref|YP_002523202.1| hypothetical protein RSKD131_4489 [Rhodobacter sphaeroides KD131]
 gi|221163387|gb|ACM04349.1| Hypothetical Protein RSKD131_4489 [Rhodobacter sphaeroides KD131]
          Length = 1042

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 27/232 (11%)

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE-SASIKSEILKIFPAARIHIMENHG 177
           A ++H++++D+  ++   L +L  S D  VTL +      +  +   FP A I  +EN G
Sbjct: 8   AAIIHVWHLDVLDDLTEALEHLHGSADQFVTLPSSFRQEQRDRVTAAFPKATIVEVENRG 67

Query: 178 RDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKI 237
           +D+     L++   L  YD++CKIH K    KG +  E   WRR L   +LG+   V  I
Sbjct: 68  QDIGALFQLMQKVNLGRYDFICKIHTK----KGPNMPEE--WRRALLDGVLGSKRQVTHI 121

Query: 238 IRTFDTHRDIGMIGSR-------AYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK 290
           + +F     + + G+R       AY  PN          K  E   +L G   +  +D  
Sbjct: 122 VESFRADPKVMLAGARQLFVYGPAYLEPNA--------DKVAEDYASLIGDFDVRSED-- 171

Query: 291 LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV 342
             F AGT FW+RT  L  +    +   F P  +   DG   HA ER F L V
Sbjct: 172 WGFIAGTCFWIRTSILQEMAACAVD--FLPADY-VTDGAPAHAAERMFGLCV 220


>gi|24379285|ref|NP_721240.1| RgpFc protein [Streptococcus mutans UA159]
 gi|24377204|gb|AAN58546.1|AE014924_6 RgpFc protein [Streptococcus mutans UA159]
          Length = 583

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 113/241 (46%), Gaps = 38/241 (15%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           K A+ +H++Y+DL  E          S+DL +T  T+S   K+EI +I  A    A++ +
Sbjct: 285 KAAVHLHVFYVDLLEEFLTAFKQFHFSYDLFIT--TDSDDKKAEIEEILSANSQEAQVFV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L     LS YD+V   H KKSK   +  W G  WR  L  D+L  P 
Sbjct: 343 TGNIGRDVLPMLKL--KNYLSTYDFVGHFHTKKSKEADF--WAGQSWREELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMIC----TLAGRMGIT 285
               I+     +  IG++ +     +RY NK  D       N  +I     TL  +MG+T
Sbjct: 398 D--NILAQLQQNPKIGLVIADMPTFFRY-NKIVD-----AWNEHLIAPEMNTLWQKMGMT 449

Query: 286 FQDQKLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
              +K+DF A        GT  W + +AL P+ +L L+    P+        I HA+ER 
Sbjct: 450 ---KKIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPE-EPLPQNSILHAIERL 505

Query: 338 F 338
            
Sbjct: 506 L 506


>gi|302337198|ref|YP_003802404.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
 gi|301634383|gb|ADK79810.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
          Length = 1808

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 19/240 (7%)

Query: 118  IAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL---VTESASIKSEILKIFP---AARIH 171
            I + +HL+YIDL  E+ + L N+ + F L ++    V +   IK  + K  P      + 
Sbjct: 1019 IGVHLHLFYIDLAEELLSSLINIPVCFSLFISTSAGVKDQEYIKKIVNKKLPLCNECTVI 1078

Query: 172  IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
              EN GRD+ PF++      LS +D +   H KKS    +S    D  RR+L + +LG  
Sbjct: 1079 QTENRGRDIAPFIVEF-GNSLSQFDLILHFHSKKSL---HSDSLSDA-RRFLLHYILGNK 1133

Query: 232  GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKL 291
             +  + +  F  +  IGM+    +       ++     + ++ +     +MGI +  +  
Sbjct: 1134 AITIQNLNMFFENGSIGMVAPPYHPSLRNMPNFGLQEYETKQFL----KKMGINYSGKCT 1189

Query: 292  DFFAGTMFWVRTEALDPI--KNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRI 349
            DF AG+ FW R +A+  +   N+R + +  P+    +DG + H +ER   +  K+ NF+I
Sbjct: 1190 DFPAGSFFWCRKDAIRQLLTSNIRWNSF--PEEKGQIDGTLAHVIERSLGIICKQNNFKI 1247


>gi|329944276|ref|ZP_08292535.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328531006|gb|EGF57862.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 636

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 7/234 (2%)

Query: 109 VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHV-TLVTESASIKSEILKIFP- 166
           V++   K KIA++ HLYY+DL       + N+    D+ + T   E         K  P 
Sbjct: 301 VVREPKKQKIALIAHLYYMDLVEPTLKYIRNMPEGIDIFLSTSSPEKVEQVEAACKGLPY 360

Query: 167 AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYD 226
              + ++EN GRDV PFL+  + + + +YD VC  H KK  +  Y +  GD +    F +
Sbjct: 361 NIEVRLVENRGRDVGPFLVAWK-DVVHDYDVVCYTHDKKVTQL-YPYSVGDGFAYKCFEN 418

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
           LL     V  +I TFD    +G +      + + +  +T   G N +    L   +G+  
Sbjct: 419 LLPTRDFVKNVIATFDAEPRLGFLAPTPPNHADYFPVFTYGWGPNFDRTKALLRELGLDV 478

Query: 287 Q-DQKLDFFA--GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
             D   +  A  G+MFW R +AL P+ +        P     +DG + HA+ER 
Sbjct: 479 PLDPTKEPIAPLGSMFWFRPQALKPLFDHDWQWEEFPPEPCPIDGTLMHAIERS 532


>gi|325067622|ref|ZP_08126295.1| hypothetical protein AoriK_07369 [Actinomyces oris K20]
          Length = 626

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 10/238 (4%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKIFP-AARIHIME 174
           KIA++ HLYY+DL       + ++    DL +T+ + E A +  E  K  P    + ++E
Sbjct: 309 KIALIAHLYYMDLLEPTLAYVKSMPEGTDLILTVGSQEKAELVEEACKDLPYNVTVRLIE 368

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKK-SKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           N GRDV   L+  + + + +YD VC  H KK ++ K YS   GD +    F +LL     
Sbjct: 369 NRGRDVSALLVGCK-DIIHDYDLVCFTHDKKVTQVKPYSV--GDGFAIKCFENLLATRDF 425

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGR---MGITFQDQK 290
           V  +I TFD    +G++      + + +  ++   G N E   TL  +   + +   + +
Sbjct: 426 VKNVIATFDAEPRLGLLAPTPPNHGDYFPVFSMGWGPNFERTKTLLEKELNLSVPIDESR 485

Query: 291 LDFFA-GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
                 GTMFW R  AL P+ +        P     +DG I HA+ER +    + + +
Sbjct: 486 APIAPLGTMFWFRPAALKPLFDHDWQWEDFPPEPNNIDGTILHAIERAYGYVAQASGY 543


>gi|258654317|ref|YP_003203473.1| Rhamnan synthesis F [Nakamurella multipartita DSM 44233]
 gi|258557542|gb|ACV80484.1| Rhamnan synthesis F [Nakamurella multipartita DSM 44233]
          Length = 631

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 115/252 (45%), Gaps = 34/252 (13%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIME-- 174
           +I ++ H++Y D+  E+   + N+ + FDL VT  T SA+ K  I     A  +  +E  
Sbjct: 297 RICVLAHIFYEDMTDEMMGWIGNIPVPFDLVVT--TTSAAKKEAIESALEAYALKSVEVR 354

Query: 175 ----NHGRDVLPFLILLETEQLS-NYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
               N GR    FLI       S  YD V KIH KKS + G +   G L++     +LL 
Sbjct: 355 LVESNRGRAESAFLIACRDVLTSGEYDLVLKIHSKKSPQNGANL--GQLFKHHSVDNLLS 412

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----KNREMICTLAGRMGI- 284
           +PG V  I+  F +   +GM+      +P        +LG     NRE    LA ++GI 
Sbjct: 413 SPGYVASILGMFQSQPSLGMV------FPPVVNIGFPTLGHSWFTNREAAHELADQLGIH 466

Query: 285 TFQDQKLDFFA-GTMFWVRTEALDPIKNLRLSRY------FEPKVHKALDGEIEHAVERC 337
           T  D+       GTMFW R E+L      +L+R+      F  +     DG + H +ER 
Sbjct: 467 TIFDRTTPLAPNGTMFWARPESL-----AKLARHDFDYSQFAAEHEGWSDGMLGHVIERL 521

Query: 338 FSLSVKKANFRI 349
           +  +V  A  RI
Sbjct: 522 YGYAVLDAGLRI 533


>gi|304309760|ref|YP_003809358.1| hypothetical protein HDN1F_01080 [gamma proteobacterium HdN1]
 gi|301795493|emb|CBL43691.1| hypothetical protein HDN1F_01080 [gamma proteobacterium HdN1]
          Length = 1315

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 24/244 (9%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE-ILKIFPAAR---IH 171
           A IAI +HLYY DL       LS +   FDL++++   +  ++ E +++  P  R   I 
Sbjct: 443 ATIAIHIHLYYADLAPTFVQALSRMERPFDLYISIQVRANPVEIEAVVRKIPCLRGLDIR 502

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
              N GRD+ PF+ +   E L  YD +  +H KKS    Y+      W  ++   L  +P
Sbjct: 503 ATPNLGRDLYPFVCIF-GEALRKYDIIAHLHSKKSL---YNQGATAGWLEYILDSLFRSP 558

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAYRYPNK-----YCDYTCSLGKNREMICTLAGRMGIT- 285
             + +I+         G++      YP       Y  YT    ++R     +  R G+T 
Sbjct: 559 EDIARILERLSDASQTGIV------YPQNFSGLPYMAYTWLANRSRAQ--QVQARFGLTS 610

Query: 286 FQDQKLDFFAGTMFWVRTEALDPIKNLRLSR-YFEPKVHKALDGEIEHAVERCFSLSVKK 344
                 D+ AG+MFW R +A+ P    +L+   FE +  +  DG + H +ER   L  + 
Sbjct: 611 LPSGYFDYPAGSMFWARADAIAPFFEAQLNEDDFENESGQT-DGTLAHTLERFLVLVPES 669

Query: 345 ANFR 348
             FR
Sbjct: 670 LGFR 673


>gi|310829395|ref|YP_003961752.1| hypothetical protein ELI_3842 [Eubacterium limosum KIST612]
 gi|308741129|gb|ADO38789.1| hypothetical protein ELI_3842 [Eubacterium limosum KIST612]
          Length = 627

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 16/247 (6%)

Query: 111 QIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESAS-IKSEILKIFPAA- 168
           +I  + +IA + HLY+ DL  E    LS++    D+++T  TE    +  E  K F    
Sbjct: 306 KILCEKRIAAIFHLYFEDLIDETYRYLSSMPEEADIYITTDTEPKKKLIQEKFKDFSCRN 365

Query: 169 -RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKK-SKRKGYSWWEGDLWRRWLFYD 226
            ++ +++N GRDV   L+  +   + NYDYVC  H KK ++ K YS   G  +    F +
Sbjct: 366 FKVILIQNRGRDVSALLVATKA-FIMNYDYVCFAHDKKVTQTKPYSI--GGAFAYKCFEN 422

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMI----GSRAYRYPNKYCDYTCSLGKNREMICTLAGRM 282
            L     V  II  F+ +  +GM+     +    YP    ++ C+    + +I  L  ++
Sbjct: 423 TLQNKNFVLNIINAFEKNPRLGMLMPAPPNNGPYYPTLGNEWMCNYEVTKNLIDELGIKV 482

Query: 283 GITFQDQKLDFFAGTMFWVRTEALDPI--KNLRLSRYFEPKVHKALDGEIEHAVERCFSL 340
            +    + +    GTMFW R +AL  +  KN   S +  P+    +DG + HA+ER + L
Sbjct: 483 PMDPGKEPISPL-GTMFWFRPKALKVLFDKNWEYSDF--PEEPNKVDGTLLHAIERAYGL 539

Query: 341 SVKKANF 347
            V+   F
Sbjct: 540 IVQSEGF 546


>gi|209524107|ref|ZP_03272658.1| glycosyl transferase family 2 [Arthrospira maxima CS-328]
 gi|209495482|gb|EDZ95786.1| glycosyl transferase family 2 [Arthrospira maxima CS-328]
          Length = 2819

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 20/250 (8%)

Query: 117  KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA-SIKSEILKIFPAARIHIMEN 175
            KIA+V+H YY +L  E+ + L NLS  +DL VT+      S+ S + K     ++ I++N
Sbjct: 1738 KIAVVLHAYYPELLPELFSKLDNLS-DYDLFVTIPENVVDSVTSALDKYTKNYQVSIVKN 1796

Query: 176  HGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVF 235
             G D+LPFL ++       Y YVCKIH K+          G LWR  L   +LG   +  
Sbjct: 1797 IGYDILPFLEVISELDTLGYKYVCKIHTKRDHPDF-----GSLWRECLLDAVLGDKNITE 1851

Query: 236  KIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFA 295
            +II  FD +  + ++G  A  Y +          K ++MI      + +    +   FF 
Sbjct: 1852 QIITAFDNNPSLQIVGP-ALLYMSMLGTIYDGHEKMKKMIHDFMEPLNLI---EDWGFFG 1907

Query: 296  GTMFWVRTEALDPIKNLRLSRYFEPKVHKA--LDGEIEHAVERCFSL-------SVKKAN 346
            G+MFW R   L  I +  L +  + +  K+    G   H VER   L        V   +
Sbjct: 1908 GSMFWSRITPLKYIADQILLKPIDWQASKSWLTTGFYYHIVERLLGLVSYINEGQVGLVD 1967

Query: 347  FRISDVDCIL 356
            ++I D + I+
Sbjct: 1968 YKIIDTENIV 1977


>gi|71735705|ref|YP_273244.1| hypothetical protein PSPPH_0972 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556258|gb|AAZ35469.1| conserved hypothetical protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 1262

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 108/244 (44%), Gaps = 25/244 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA-----SIKSEILKIFPAARIH 171
           +I + +HLYY DL   I+  L+N+ ++FDL ++   E        I S+ +       I 
Sbjct: 211 RIGVYLHLYYTDLLGAISKHLNNIPLAFDLFISTPHELDHKKLRKIVSDSVTNVKEISIK 270

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR-KGYSWWEGDLWRRWLFYDLLGA 230
            + N GRD+ PF+I    E L  YD +C IH KKS+  KG S W  D+        LLG+
Sbjct: 271 HVPNRGRDIAPFIIEFGNE-LQAYDAICHIHTKKSEHTKGLSDWGDDI-----LSSLLGS 324

Query: 231 PGVVFKIIRTFDTHRDIGMIGSRAYRYP---NKYCDYTCSLGKNREMIC-TLAGRMGITF 286
              V KI+          + G     YP   N Y        +N E+    L+  +    
Sbjct: 325 REDVKKILTL--------LKGDAKIIYPEGQNYYMKDPTGWSENHEIAKHILSDHLETDI 376

Query: 287 QD-QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345
            +  K +F  G+MFW R E +    N+ L     P+     DG + HA+ER   +S   A
Sbjct: 377 SNFPKAEFPEGSMFWARQEGIQSFLNIPLDWEDFPEEPIPTDGTLAHALERIILISAYAA 436

Query: 346 NFRI 349
             RI
Sbjct: 437 PGRI 440


>gi|296876714|ref|ZP_06900762.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432216|gb|EFH18015.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           parasanguinis ATCC 15912]
          Length = 582

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 26/254 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           K+A+ +H++Y+DL  E  +   +    +DL +T  T+    K  I +I       AR+ +
Sbjct: 285 KVAVHLHVFYVDLLEEFLDAFRDFHFDYDLWIT--TDVEEKKQAIEQILSNRAQDARVVV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L+L   EQLS YDYV   H KKSK   +  W G+ WR+ L  ++L  P 
Sbjct: 343 TGNIGRDVLPMLLL--KEQLSKYDYVGHFHTKKSKEADF--WAGESWRKELI-EMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGI--TFQ 287
              +I+   + +  +G+  +     +RY      +  +L      +  L  RMG   T  
Sbjct: 398 D--QILANMEANPKVGITIADIPTFFRYNRIVVAWNEALISPE--MNKLWQRMGATKTID 453

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            +K++ F    GT  W + +AL P+ +L L+    P         I HA+ER        
Sbjct: 454 FEKINTFVMSYGTFVWFKYDALKPLFDLNLTAADVP-AEPLPQNSILHAIERLLIYIAWD 512

Query: 343 KKANFRISDVDCIL 356
           +K +FRIS    +L
Sbjct: 513 QKYDFRISQNPHVL 526


>gi|116628171|ref|YP_820790.1| polysaccharide biosynthesis protein [Streptococcus thermophilus
           LMD-9]
 gi|116101448|gb|ABJ66594.1| Lipopolysaccharide biosynthesis protein [Streptococcus thermophilus
           LMD-9]
          Length = 581

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 121/254 (47%), Gaps = 26/254 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E  +   +   ++DL +T  T+    K EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLEEFLDAFQDFHFAYDLWIT--TDVEEKKQEIEQILSRRSQDATIVV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L+L   E+LS YDYV   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNIGRDVLPMLLL--KEKLSRYDYVGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGM-IGSRA--YRYPNKYCDYTCSLGKNREMICTLAGRMGIT--FQ 287
              +I+   + +  +G+ IG     +RY      +  +L      +  L  RMG T    
Sbjct: 398 D--QILANMEANPKVGITIGDIPTYFRYNRIVVAWNEALISPE--MNKLWQRMGATKNID 453

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            + L+ F    GT  W + +AL P+ +L L+    P         I HA+ER        
Sbjct: 454 FKNLNTFVMSYGTFVWFKYDALKPLFDLNLTVSDVP-AEPLPQNSILHAIERLLVYIAWD 512

Query: 343 KKANFRISDVDCIL 356
           +K +FRIS    +L
Sbjct: 513 QKYDFRISQNPHVL 526


>gi|55823377|ref|YP_141818.1| polysaccharide biosynthesis protein [Streptococcus thermophilus
           CNRZ1066]
 gi|55739362|gb|AAV63003.1| polysaccharide biosynthesis protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 581

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 121/254 (47%), Gaps = 26/254 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E  +   +   ++DL +T  T+    K EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLEEFLDAFQDFHFAYDLWIT--TDIEEKKQEIEQILSRRSQDATIVV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L+L   E+LS YDYV   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNIGRDVLPMLLL--KEKLSRYDYVGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGM-IGSRA--YRYPNKYCDYTCSLGKNREMICTLAGRMGIT--FQ 287
              +I+   + +  +G+ IG     +RY      +  +L      +  L  RMG T    
Sbjct: 398 D--QILANMEANPKVGITIGDIPTYFRYNRIVVAWNEALISPE--MNKLWQRMGATKNID 453

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            + L+ F    GT  W + +AL P+ +L L+    P         I HA+ER        
Sbjct: 454 FKNLNTFVMSYGTFVWFKYDALKPLFDLNLTVSDVP-AEPLPQNSILHAIERLLVYIAWD 512

Query: 343 KKANFRISDVDCIL 356
           +K +FRIS    +L
Sbjct: 513 QKYDFRISQNPHVL 526


>gi|291520004|emb|CBK75225.1| Lipopolysaccharide biosynthesis protein [Butyrivibrio fibrisolvens
           16/4]
          Length = 984

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 34/245 (13%)

Query: 118 IAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV--TESASIKSEI--LKIFPAARIHIM 173
           +A+ +HL+Y+DL  E  +  +N+   FDL+++     + + IKS +  LK+     I  +
Sbjct: 329 VAVHLHLFYVDLLPEFVSYFANIPFRFDLYISCQEGADVSVIKSGVKELKMANKVVIRPL 388

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P  +    +++  +DY   +H KKS    YS  E   WR++    LLG+P  
Sbjct: 389 PNRGRDLAPLYVGF-ADEIRQHDYFLHVHSKKSL---YSGAEKGGWRQFSLELLLGSPEK 444

Query: 234 VFKIIRTF----------DTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLA-GRM 282
           V  I   F          D H ++ MI   AY        +  + G  R++      G M
Sbjct: 445 VNSIFNLFKNKNAGLVYPDIHEEVPMI---AYS-------WLANAGLGRKLFDEFELGEM 494

Query: 283 GITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV 342
              F     ++ AG+ FW RT+AL PI N        P+     DG + HA+ER      
Sbjct: 495 PTVF-----NYPAGSFFWARTDALMPIFNRNYIYEDFPEEAGQTDGTLAHALERIIPFVS 549

Query: 343 KKANF 347
           +K  +
Sbjct: 550 RKLGY 554


>gi|306831662|ref|ZP_07464819.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325978600|ref|YP_004288316.1| rhamnosyltransferase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|304426087|gb|EFM29202.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325178528|emb|CBZ48572.1| rhamnosyltransferase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 586

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 29/248 (11%)

Query: 108 KVMQIAIKA-----KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSE 160
           KV+++  K      K+A+ +H +Y+DL  E  N   N    +DL +T  TE+  A I+S 
Sbjct: 274 KVLKVVEKEYSNTKKVAVHLHTFYVDLLEEFLNQFENFHFDYDLFLTTDTEAKKAEIESI 333

Query: 161 ILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWR 220
           + K    A++ +  N GRD++P L L   E+LS+YDY+   H KKS    Y +W GD WR
Sbjct: 334 LEKNGKIAQVFLTGNRGRDIIPMLKL--KEELSSYDYIGHFHTKKSPE--YPYWVGDSWR 389

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR--EMICTL 278
             L+  L+ +      I+   + + ++G++ +    +  +Y        +NR  + +  L
Sbjct: 390 NELYQMLIQSAD---NILANLENNDNLGLVIADIPSF-FRYTKIVDPWNENRFADGMNEL 445

Query: 279 AGRMGITFQDQKLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
             RM +   ++++DF          GT  W + + L P+ +L L+    P         I
Sbjct: 446 WERMNL---ERQIDFNNLSTFIMSYGTFIWFKRDTLKPLFDLELTDDEIPS-EPIPQHTI 501

Query: 331 EHAVERCF 338
            H++ER  
Sbjct: 502 LHSIERIL 509


>gi|322385732|ref|ZP_08059376.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           cristatus ATCC 51100]
 gi|321270470|gb|EFX53386.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           cristatus ATCC 51100]
          Length = 598

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 20/232 (8%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE--ILKIFPAARIHIME 174
           KIA+ +H YY+DL  +      N   ++DL +T  +E   ++ E  +LK     +I+I  
Sbjct: 288 KIAVHLHTYYVDLLEDFLKQFENFHFTYDLFLTTDSEKKKLEIEAVLLKRNQLGKIYITG 347

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVV 234
           N GRD++P L L   E+L  YDY+   H KKS    Y +W GD WR  LF D+L  P  +
Sbjct: 348 NKGRDIIPMLKL--REELCTYDYIGHFHTKKSPE--YPYWVGDSWRNELF-DMLLKPADL 402

Query: 235 FKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGI--TFQDQ 289
             I+ + +  + +G++ +     +RY  K  D   +  K  + +  L  RM I  +    
Sbjct: 403 --IMASLENDKRLGLVIADIPTFFRY-TKIVD-PWNENKFADDMNILWERMDINRSIDFN 458

Query: 290 KLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           KL+ F    GT  W + +AL P+ +L L     P         I H++ER  
Sbjct: 459 KLNTFIMSYGTFIWFKYDALKPLFDLNLQDEDIPS-EPLPQHTILHSIERIL 509


>gi|227497960|ref|ZP_03928140.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226832618|gb|EEH65001.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 626

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 16/260 (6%)

Query: 90  RIHHFPQLLHGWESPAMGKVMQIAIK---AKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R ++   L+   E   +     +A++   +KIA+V+H+Y++DL  ++ +  +++    DL
Sbjct: 278 RTNNLADLVKNLELTYILPTQAVAVQPEESKIALVMHVYHMDLLPQLLHYAASMPAGCDL 337

Query: 147 HVTLVTESAS--IKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
             T+ TE+ +  ++     +       ++EN GRDV   L+     +L +YD VC IH K
Sbjct: 338 IATVDTEAKAQQVREATAGLSLNVETILIENRGRDVAALLVGARP-RLLDYDLVCFIHDK 396

Query: 205 K-SKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCD 263
           K ++ +  S  EG  + +  F ++L  P  V  +I TF     +G++   A  + + +  
Sbjct: 397 KVTQIRPGSVGEG--FAKRCFENVLATPEFVCNVIATFQAEPRLGVLTPSAPHHGDYFPI 454

Query: 264 YTCSLGKN----REMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFE 319
              S G N    +E++ +      I    + +  F G++FW R +A+ P+   R  RY +
Sbjct: 455 SAFSWGPNDKNTKELLASFGLHAPIDPDKEAIAPF-GSVFWFRPQAIRPLLE-RKWRYDD 512

Query: 320 -PKVHKALDGEIEHAVERCF 338
            P     +DG I HA+ER +
Sbjct: 513 FPAEPLPIDGTISHAIERVY 532


>gi|319946716|ref|ZP_08020950.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           australis ATCC 700641]
 gi|319746764|gb|EFV99023.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           australis ATCC 700641]
          Length = 581

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 117/246 (47%), Gaps = 22/246 (8%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEIL-KIFPAARIHIME 174
           K+A+ +H++Y+DL  E  +       ++DL +T  V E      EIL      A + +  
Sbjct: 285 KVAVHLHVFYVDLLEEFLDAFQAFHFAYDLWITTDVEEKKQAIEEILSNRAQVATVVVTG 344

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVV 234
           N GRDVLP L+L   EQLS+YDYV   H KKSK   +  W G+ WR+ L  D+L  P   
Sbjct: 345 NIGRDVLPMLLL--KEQLSHYDYVGHFHTKKSKEADF--WAGESWRKELI-DMLVKPAD- 398

Query: 235 FKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGI--TFQDQ 289
            KI+   + +  +G+  +     +RY N+       +  + EM   L  RMG   T   +
Sbjct: 399 -KILANMEANPKVGITIADIPTFFRY-NRIVVAWNEVLISPEM-NKLWQRMGATKTIDFK 455

Query: 290 KLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KK 344
            L+ F    GT  W + +AL P+ +L L     P         I HA+ER        +K
Sbjct: 456 NLNTFVMSYGTFVWFKYDALKPLFDLNLKAADVP-AEPLPQNSILHAIERLLVYIAWDQK 514

Query: 345 ANFRIS 350
            +FRIS
Sbjct: 515 YDFRIS 520


>gi|326772082|ref|ZP_08231367.1| rhamnan synthesis protein F [Actinomyces viscosus C505]
 gi|326638215|gb|EGE39116.1| rhamnan synthesis protein F [Actinomyces viscosus C505]
          Length = 652

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 12/239 (5%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKIFP-AARIHIME 174
           K+A++ HLYY+DL         ++    D  +T+ + E   +  E  K  P    + ++E
Sbjct: 335 KVALIAHLYYMDLLEPTLAYARSMPEGTDFILTVGSQEKVELVEEACKDLPYNVTVRLIE 394

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKK-SKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           N GRDV   L+  + + +S+YD VC IH KK ++   Y+  EG  + R  F +LL     
Sbjct: 395 NRGRDVSALLVGCK-DIVSDYDLVCFIHDKKVTQLSPYTVGEG--FARKCFDNLLPTREF 451

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN---REMICTLAGRMGITFQDQK 290
           V  +I TFD+   +G++      + + +  Y+ S G N    +M+      + +     K
Sbjct: 452 VENVISTFDSEPRLGLLSPTPPNHADYFPIYSYSWGPNFDRTKMLLEKELNLSVPLDAHK 511

Query: 291 LDFFA--GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
            +  A  GTMFW R  AL P+ +        P     +DG I HA+ER +    + + +
Sbjct: 512 -EVIAPLGTMFWFRPAALKPLFDHDWQWEDFPPEPNDIDGTILHAIERAYGYVAQASGY 569


>gi|55821450|ref|YP_139892.1| polysaccharide biosynthesis protein [Streptococcus thermophilus LMG
           18311]
 gi|55737435|gb|AAV61077.1| polysaccharide biosynthesis protein [Streptococcus thermophilus LMG
           18311]
          Length = 594

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 106/231 (45%), Gaps = 18/231 (7%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSEILKIFPAARIHIME 174
           KIA+ +H YY+DL  +      N   ++DL +T  +E   A I+S + K    ARI I  
Sbjct: 288 KIAVHLHTYYVDLLEDFLKQFENFHFTYDLFLTTDSEDKKAEIQSILDKNGKVARIFITG 347

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVV 234
           N GRDV+P L L   ++LS YDY+   H KKS    Y +W GD WR  LF  L+      
Sbjct: 348 NRGRDVIPMLKL--KDELSAYDYIGHFHTKKSPE--YPYWVGDSWRNELFSMLIQPAD-- 401

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR--EMICTLAGRM--GITFQDQK 290
             II   +    +G++ +    +  +Y        +NR  E +  L  RM  G      K
Sbjct: 402 -NIIANLERDDRLGLVIADIPSF-FRYTKIVDPWNENRFAEGMNDLWERMDLGRDIDFDK 459

Query: 291 LDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           ++ F    GT  W + +AL P+ +L L    E          I H++ER  
Sbjct: 460 MNTFIMSYGTFIWFKYDALKPLFDLDLQDE-EIPAEPIPQHTILHSIERIL 509


>gi|225868697|ref|YP_002744645.1| rhamnan synthesis protein F family protein [Streptococcus equi
           subsp. zooepidemicus]
 gi|225701973|emb|CAW99527.1| rhamnan synthesis protein F family protein [Streptococcus equi
           subsp. zooepidemicus]
          Length = 581

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 116/252 (46%), Gaps = 35/252 (13%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIF----PAARIHI 172
           KIA+ +H++Y+DL  E     S+    +DL +T  T+S + K+EI +I      +A I +
Sbjct: 285 KIAVHLHVFYVDLLSEFLEAFSHFHFDYDLLIT--TDSKAKKAEIKEILRESGASADILV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L   E+LS YDY+   H KKSK   +  W G  WR  L  D++  P 
Sbjct: 343 TGNIGRDVLPMLTL--KERLSQYDYIGHFHTKKSKEADF--WAGQSWRTELI-DMMVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGR----MGIT 285
                    D    IG++ +     +R+ NK  D       N  +I     +    MG+T
Sbjct: 398 DQILTALAADA---IGIVIADIPSFFRF-NKIVD-----AWNEHLIAPEMNQLWQAMGLT 448

Query: 286 --FQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSL 340
                Q +D F    GT  W + +AL P+ +L LS    P         I HA+ER    
Sbjct: 449 KRIDFQTMDTFVMSYGTFVWFKYDALKPLFDLDLSEADIP-AEPLPQNSILHAIERLLIY 507

Query: 341 SV--KKANFRIS 350
               +  +FRIS
Sbjct: 508 IAWDRHYDFRIS 519


>gi|225870347|ref|YP_002746294.1| rhamnan synthesis protein F family protein [Streptococcus equi
           subsp. equi 4047]
 gi|225699751|emb|CAW93520.1| rhamnan synthesis protein F family protein [Streptococcus equi
           subsp. equi 4047]
          Length = 581

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 116/252 (46%), Gaps = 35/252 (13%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIF----PAARIHI 172
           KIA+ +H++Y+DL  E     S+    +DL +T  T+S + K+EI +I      +A I +
Sbjct: 285 KIAVHLHVFYVDLLSEFLEAFSHFHFDYDLLIT--TDSKAKKAEIKEILRESGASADILV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L   E+LS YDY+   H KKSK   +  W G  WR  L  D++  P 
Sbjct: 343 TGNIGRDVLPMLTL--KERLSQYDYIGHFHTKKSKEADF--WAGQSWRTELI-DMMVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGR----MGIT 285
                    D    IG++ +     +R+ NK  D       N  +I     +    MG+T
Sbjct: 398 DQILTALAADA---IGIVIADIPSFFRF-NKIVD-----AWNEHLIAPEMNQLWQAMGLT 448

Query: 286 --FQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSL 340
                Q +D F    GT  W + +AL P+ +L LS    P         I HA+ER    
Sbjct: 449 KRIDFQTMDTFVMSYGTFVWFKYDALKPLFDLDLSEADIP-AEPLSQNSILHAIERLLIY 507

Query: 341 SV--KKANFRIS 350
               +  +FRIS
Sbjct: 508 IAWDRHYDFRIS 519


>gi|306833804|ref|ZP_07466929.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus bovis
           ATCC 700338]
 gi|304423998|gb|EFM27139.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus bovis
           ATCC 700338]
          Length = 586

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 29/248 (11%)

Query: 108 KVMQIAIKA-----KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSE 160
           KV+++  K      K+A+ +H +Y+DL  E  N   N    +DL +T  TE+  A I+S 
Sbjct: 274 KVLKVVEKEYSNTKKVAVHLHTFYVDLLEEFLNQFENFHFDYDLFLTTDTEAKKAEIESI 333

Query: 161 ILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWR 220
           + K    A++ +  N GRD++P L L   E+LS+YDY+   H KKS    Y +W GD WR
Sbjct: 334 LEKNGKTAQVFLTGNRGRDIIPMLKL--KEELSSYDYIGHFHTKKSPE--YPYWVGDSWR 389

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR--EMICTL 278
             L+  L+ +      ++   + + ++G++ +    +  +Y        +NR  + +  L
Sbjct: 390 NELYQMLIQSAD---NVLANLENNDNLGLVIADIPSF-FRYTKIVDPWNENRFADGMNEL 445

Query: 279 AGRMGITFQDQKLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
             RM +  Q   +DF          GT  W + + L P+ +L L+    P         I
Sbjct: 446 WERMNLGRQ---IDFNNLSTFIMSYGTFIWFKHDTLKPLFDLELTDDEIPS-EPIPQHTI 501

Query: 331 EHAVERCF 338
            H++ER  
Sbjct: 502 LHSIERIL 509


>gi|288905572|ref|YP_003430794.1| polysaccharide biosynthesis protein (RgpF) [Streptococcus
           gallolyticus UCN34]
 gi|288732298|emb|CBI13867.1| Putative polysaccharide biosynthesis protein (RgpF) [Streptococcus
           gallolyticus UCN34]
          Length = 586

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 33/250 (13%)

Query: 108 KVMQIAIKA-----KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSE 160
           KV+++  K      K+A+ +H +Y+DL  E  N   N    +DL +T  TE+  A I+S 
Sbjct: 274 KVLKVVEKEYSNTKKVAVHLHTFYVDLLEEFLNQFENFHFDYDLFLTTDTEAKKAEIESI 333

Query: 161 ILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWR 220
           + K    A++ +  N GRD++P L L   E+LS+YDY+   H KKS    Y +W GD WR
Sbjct: 334 LEKNGKIAQVFLTGNRGRDIIPMLKL--KEELSSYDYIGHFHTKKSPE--YPYWVGDSWR 389

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRA---YRYP--------NKYCDYTCSLG 269
             L+  L+ +      I+   + + ++G++ +     +RY         N++ D     G
Sbjct: 390 NELYQMLIQSAD---NILANLENNDNLGLVIADIPSFFRYTKIVDPWNENRFAD-----G 441

Query: 270 KNREMICTLAGRMGITFQDQKLDFFA-GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDG 328
            N    C    R  I F +      + GT  W + + L P+ +L L+    P        
Sbjct: 442 MNELWECMNLERQ-IDFNNLSTFIMSYGTFIWFKRDTLKPLFDLELTDDEIPS-EPIPQH 499

Query: 329 EIEHAVERCF 338
            I H++ER  
Sbjct: 500 TILHSIERIL 509


>gi|23009067|ref|ZP_00050256.1| COG3754: Lipopolysaccharide biosynthesis protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 486

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 19/227 (8%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIH--- 171
            A+I +  H+++ DL   +    +N  I FD  V + T SAS    I K F     H   
Sbjct: 272 NARIGVFAHIFHTDLCEYVLKYTNN--IPFDTTVYVTTSSASKADFIRKTFGRLSKHRYE 329

Query: 172 --IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
             I  N GRD+ P L+        N DY   +H KKS      +   D WR +LF   LG
Sbjct: 330 IVIAPNRGRDIAPMLVGYRN-AFQNCDYAVHVHTKKSLHYSSGF---DAWRDYLFEMNLG 385

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ 289
           +  ++  I+    +  +IG +    Y    K   +    G N + I  L    G++   +
Sbjct: 386 SAELITGIVNVL-SRSNIGAVAPDHYAPIAKLIQW----GGNIDAINGLLSFTGLSVASE 440

Query: 290 K-LDFFAGTMFWVRTEALDPIKNLRLSRY-FEPKVHKALDGEIEHAV 334
             LDF +G+MFW + +AL  +  + L  Y F+P++ + +DG + HA+
Sbjct: 441 NVLDFPSGSMFWFKPDALSKLMEIHLQSYHFDPELGQ-VDGTLAHAI 486


>gi|160936495|ref|ZP_02083863.1| hypothetical protein CLOBOL_01386 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440580|gb|EDP18318.1| hypothetical protein CLOBOL_01386 [Clostridium bolteae ATCC
           BAA-613]
          Length = 674

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 15/230 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAAR-----IH 171
           KIA+V HL+Y DL  E    L N+  + DL++T+   +   K ++   F + R     + 
Sbjct: 292 KIAVVAHLFYPDLMDETLRYLQNIQENIDLYITVA--NIETKYKVYNYFESIRRSNVKVL 349

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
           +  N GRD    L+    E L  Y+Y+C +H KK+ R G     G  +    + + L + 
Sbjct: 350 LSGNRGRDAGSLLVACR-EYLMQYEYLCFVHDKKTTRGGGPVTVGKAFMYHAWENTLRSG 408

Query: 232 GVVFKIIRTFDTHRDIGMIGSR-----AYRYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
           G V  II+ F+ +  +G++         Y       ++TC   K +E+   L+  + +  
Sbjct: 409 GFVSSIIKLFEKNDRLGILTPPVPALGGYLTELVGNEWTCCYQKTKELAEILS--LKVPM 466

Query: 287 QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
             QK  F   T FW R  AL P+          P+   A DG + HA+ER
Sbjct: 467 SPQKQPFALATAFWCRPAALKPLFEYPWRYEDFPEEPLASDGTLNHAIER 516


>gi|195977971|ref|YP_002123215.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|195974676|gb|ACG62202.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
          Length = 581

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 119/262 (45%), Gaps = 35/262 (13%)

Query: 107 GKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIF- 165
            + + IA   KIA+ +H++Y DL  E     S+    +DL +T  T+S + K+EI +I  
Sbjct: 275 NQPISIAPSKKIAVHLHVFYADLLSEFLEAFSHFHFDYDLLIT--TDSKAKKAEIKEILR 332

Query: 166 ---PAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRW 222
               +A I +  N GRDVLP L L   E+LS YDY+   H KKSK   +  W G  WR  
Sbjct: 333 ESGASADILVTGNIGRDVLPMLTL--KERLSQYDYIGHFHTKKSKEADF--WAGQSWRTE 388

Query: 223 LFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLA 279
           L  D++  P          D    IG++ +     +R+ NK  D       N  +I    
Sbjct: 389 LI-DMMVKPADQILTALAADA---IGIVIADIPSFFRF-NKIVD-----AWNEHLIAPEM 438

Query: 280 GR----MGIT--FQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
            +    MG+T     Q +D F    GT  W + +AL P+ +L L+    P         I
Sbjct: 439 NQLWQAMGLTKRIDFQTMDTFVMSYGTFVWFKYDALKPLFDLGLNEADIP-AEPLPQNSI 497

Query: 331 EHAVERCFSLSV--KKANFRIS 350
            HA+ER        +  +FRIS
Sbjct: 498 LHAIERLLIYIAWDRHYDFRIS 519


>gi|281490695|ref|YP_003352675.1| bifunctional alpha-L-Rha
           alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Lactococcus lactis
           subsp. lactis KF147]
 gi|281374464|gb|ADA63985.1| Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Lactococcus lactis
           subsp. lactis KF147]
          Length = 589

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 21/269 (7%)

Query: 94  FPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT- 152
           +P L     S  +  + +  +   +A+ +H+YY +L  E  +   N S  +DL++T  T 
Sbjct: 265 YPDLNFLLPSKMITSLSKTVLHQTVAVHLHVYYPELLEEFLDAFKNFSFDYDLYLTTNTD 324

Query: 153 ESASIKSEILKIFPA-ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGY 211
           E   I  E+LK   A A++    NHGRD++PFL L   E+L  YD V   H K+S    +
Sbjct: 325 EKEEIIKEMLKCKDARAKLVRTPNHGRDIVPFLAL--KEELKKYDIVGHFHTKRSLEAAF 382

Query: 212 SWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSL 268
             + G+ WR  L   L+        I+  F+  + +G++ +     +R+ NK  +     
Sbjct: 383 --FAGESWRTELISMLIEPAD---NIMAHFEQKQKLGIVIADIPSFFRF-NKIVNADNEN 436

Query: 269 GKNREMICTLAGRMGITFQDQKLDFFA-----GTMFWVRTEALDPIKNLRLSRYFEPKVH 323
            +   ++  +  RM +  +    DF       GT FW +TE L+P+ NL +     P   
Sbjct: 437 KQIAPIMNDIWKRMKMNKKVNFHDFNTFTMSYGTFFWAKTEVLEPLFNLEIMDREIPN-E 495

Query: 324 KALDGEIEHAVERCFSLSV--KKANFRIS 350
                 I HA+ER        K+ +F+IS
Sbjct: 496 PLPQNTILHAIERVLIYLAWDKEMDFKIS 524


>gi|308235695|ref|ZP_07666432.1| hypothetical protein GvagA14_05663 [Gardnerella vaginalis ATCC
           14018]
 gi|311114292|ref|YP_003985513.1| rhamnan synthesis protein F [Gardnerella vaginalis ATCC 14019]
 gi|310945786|gb|ADP38490.1| rhamnan synthesis protein F [Gardnerella vaginalis ATCC 14019]
          Length = 637

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 8/230 (3%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKIFP-AARIHI 172
           K K+A+ +HLYY+DL  +  + + ++    D+ +T+ + E+  I  + ++  P    + +
Sbjct: 313 KPKVALCMHLYYMDLLDKSLHYIQSMPQGCDVILTVGSKENQQIVKQRVEHLPYDVDVRL 372

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
           +EN GRDV  FL+    + L  YDYVC  H KK  +       GD +    F ++L +  
Sbjct: 373 IENRGRDVSAFLVGGGAD-LMKYDYVCFAHDKKVTQLSPRSI-GDGFAYKCFENILASKE 430

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT-LAGRMGITFQ-DQK 290
            V  +I  F+TH  +GM       + + +  +T + G N E     L   +GI+   D+ 
Sbjct: 431 YVQNVINLFETHPRLGMAMPTPPNHADYFPGFTYTWGPNFEGTKKFLEKTLGISVPLDEN 490

Query: 291 LDFFA--GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
            D  A  GTMFW RT+A+  + + + +    P     +DG + H +ER +
Sbjct: 491 KDAIAPLGTMFWFRTKAMRGLLDRKWTYEDFPAEPLKIDGTLLHFIERAY 540


>gi|83582737|ref|YP_425043.1| glycosyl transferase, group 1 [Rhodospirillum rubrum ATCC 11170]
 gi|83578053|gb|ABC24603.1| Glycosyl transferase, group 1 [Rhodospirillum rubrum ATCC 11170]
          Length = 1236

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 114/243 (46%), Gaps = 27/243 (11%)

Query: 116  AKIAIVVHLYYIDLWIEIANLLSNLSI---SFDLHVTLVTESASI----KSEILKIFPAA 168
             K+ +  H YY+DL   I + L  + I   S DL +T   E  ++    K E  K   + 
Sbjct: 986  GKVLLHGHFYYVDL---IDDFLKKIIINDFSCDLIITTTDEDRAVFLRKKLEEYKNG-SV 1041

Query: 169  RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
             + ++ N GRDV  F   L   + S+YD V  IHGKKS     S   G+ WR +L+  L+
Sbjct: 1042 EVRVVPNIGRDVGAFFTGLSDLKNSDYDVVGHIHGKKSIH--LSDGTGNKWRNFLWEHLI 1099

Query: 229  GAPGVVFKI-IRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG--KNREMICTLAGRMGIT 285
            G       I +     + DIG++          + +     G  KN+E+   LA +MGI 
Sbjct: 1100 GGEKKAAAIAVSALIRNPDIGLV----------FAEEPFLFGWDKNKELANDLAKKMGIE 1149

Query: 286  FQDQK-LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
                +  D+  GTMFW + +AL+PI +L L     P     + G + HA+ER    +V+K
Sbjct: 1150 KSLPRFFDWPIGTMFWAKRKALEPIFDLNLRWEDYPPEPIPVYGTMLHALERLLPFAVEK 1209

Query: 345  ANF 347
            A F
Sbjct: 1210 AGF 1212


>gi|222152862|ref|YP_002562039.1| rhamnan synthesis protein F family protein [Streptococcus uberis
           0140J]
 gi|222113675|emb|CAR41606.1| rhamnan synthesis protein F family protein [Streptococcus uberis
           0140J]
          Length = 585

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 27/234 (11%)

Query: 118 IAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHIM 173
           IA+ +H++Y+DL  E  +  ++    FDL++T  T+ +  +SEI  I      +A+I + 
Sbjct: 288 IAVHLHVFYVDLLEEFLHAFTSFKFPFDLYIT--TDKSEKESEIKAILDSFRVSAKIVVT 345

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRDVLP L L   ++LS YDY+   H KKSK   +  W G+ WR  L  D+L  P  
Sbjct: 346 GNIGRDVLPMLKL--KDELSQYDYIGHFHTKKSKEADF--WAGESWRNELI-DMLIKPAN 400

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGR------MGITFQ 287
              II  F+    IG+I +     P+ +         N  +I     +      +  T  
Sbjct: 401 T--IINQFEDPA-IGIIIADI---PSFFRFNKIVTPLNEHLIAPEMNKLWEKMNLSKTID 454

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
            ++ D F    GT  W + +AL P+ +L L     PK        I HAVER  
Sbjct: 455 FEQFDTFVMSYGTFVWFKYDALKPLFDLNLKDGDVPK-EPLPQNSILHAVERLL 507


>gi|289678438|ref|ZP_06499328.1| glycosyl transferase, group 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 774

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----- 167
           A +  +A+ +H++Y D   + ++ L+N     D+ +TL    A  + + + +F       
Sbjct: 262 AARLNVAVCLHIFYEDYIEKFSHALANFPTQVDVFITLA--DAKHQKKTIAVFSKHPRVK 319

Query: 168 -ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYD 226
             ++  + N GR+  P L+   ++ L  YD  C +H KKS    YS  E   W  +L   
Sbjct: 320 NLKVRCVPNRGRNFGPLLVEF-SKDLMAYDLFCHLHSKKSL---YSGREQTQWADYLTEY 375

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY---CDYTCSLGKNREMICTLAGRMG 283
           LL    ++ +++  F  H+D+G+       YP  +     +   +  N+  +        
Sbjct: 376 LLRDANIITRLLNAFADHKDLGLY------YPTTFWMMPSWVNHVTMNKSFMAAWHNEWQ 429

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
           I   D  L + AG MFW R EAL  +        F P+     DG + HA+ER   L  +
Sbjct: 430 IDPCDGFLSYPAGGMFWARPEALKDMLEKEYDYDFFPQEPLPNDGSMLHALERVIGLLAE 489

Query: 344 KANFR 348
           K  ++
Sbjct: 490 KNGYK 494


>gi|330899783|gb|EGH31202.1| hypothetical protein PSYJA_20361 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 626

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----- 167
           A +  +A+ +H++Y D   + ++ L+N     D+ +TL    A  + + + +F       
Sbjct: 114 AARLNVAVCLHIFYEDYIEKFSHALANFPTQVDVFITLA--DAKHQKKTIAVFSKHPRVK 171

Query: 168 -ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYD 226
             ++  + N GR+  P L+   ++ L  YD  C +H KKS    YS  E   W  +L   
Sbjct: 172 NLKVRCVPNRGRNFGPLLVEF-SKDLMAYDLFCHLHSKKSL---YSGREQTQWADYLTEY 227

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY---CDYTCSLGKNREMICTLAGRMG 283
           LL    ++ +++  F  H+D+G+       YP  +     +   +  N+  +        
Sbjct: 228 LLRDANIITRLLNAFADHKDLGLY------YPTTFWMMPSWVNHVTMNKSFMAAWHNEWQ 281

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
           I   D  L + AG MFW R EAL  +        F P+     DG + HA+ER   L  +
Sbjct: 282 IAPCDGFLSYPAGGMFWARPEALKDMLEKEYDYDFFPQEPLPNDGSMLHALERVIGLLAE 341

Query: 344 KANFR 348
           K  ++
Sbjct: 342 KNGYK 346


>gi|171779906|ref|ZP_02920810.1| hypothetical protein STRINF_01693 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281254|gb|EDT46689.1| hypothetical protein STRINF_01693 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 592

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 116/240 (48%), Gaps = 39/240 (16%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           KIA+ +H++Y+DL  +  +   N    +DL +T  T++A+ K EI  I  +    A+I +
Sbjct: 291 KIAVHLHVFYVDLLEDFLDAFENFHFVYDLFIT--TDNATKKQEIESILRSNGKDAQIFV 348

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L   + LS+YDY+   H KKSK   +  W G+ WR  L  D+L  P 
Sbjct: 349 TGNVGRDVLPMLKL--KDYLSDYDYIGHFHTKKSKEADF--WAGESWRNELI-DMLIKPA 403

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICT----LAGRMGIT 285
               I+  FD  + +G++ +     +R+ NK  D       N  +I      L  +MG+T
Sbjct: 404 D--NILANFDNDK-LGIVIADIPTFFRF-NKIVD-----AWNEHLIAPAMNDLWQQMGMT 454

Query: 286 FQDQKLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
              + +DF          GT  W + +AL P+ +L L+    P         I HA+ER 
Sbjct: 455 ---KAIDFNNFHNFVMSYGTYVWFKYDALKPLFDLGLTDEDVP-AEPLPQNSILHAIERL 510


>gi|312133752|ref|YP_004001091.1| protein [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773032|gb|ADQ02520.1| Hypothetical protein BBMN68_1493 [Bifidobacterium longum subsp.
           longum BBMN68]
          Length = 651

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 11/236 (4%)

Query: 118 IAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES-ASIKSEILKIFP-AARIHIMEN 175
           +A+V HLYYIDL       +S++    D+ +T+ +E  A I  E  +  P    + ++EN
Sbjct: 311 VALVFHLYYIDLLDSSLQYISSMPEGCDVIITVGSEEKACIVKERCEGMPYNIDVRVIEN 370

Query: 176 HGRDVLPFLILLETEQLSNYDYVCKIHGKK-SKRKGYSWWEGDLWRRWLFYDLLGAPGVV 234
            GRDV   L+    + L NYD VC  H KK ++ K  S  +G  ++   F ++L +   V
Sbjct: 371 RGRDVSALLVGAGKDVL-NYDLVCFAHDKKVTQIKPLSVGDGFAYK--CFENILASKAYV 427

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQ-DQKLDF 293
             II  F+    +G++      + N +  +T S G N +    L   +  T   D+K + 
Sbjct: 428 ANIIDQFEREPHLGVLMPNPPEHGNYFPVFTLSWGDNFDGTVQLLRDIHKTVPLDKKKEV 487

Query: 294 FA--GTMFWVRTEAL-DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
            A  GTMFW R +AL D + N        PK    +DG I H +ER +   V +AN
Sbjct: 488 IAPLGTMFWFRPKALSDGLLNHNWQYSDFPKEPNKIDGTILHYIERAYCY-VAQAN 542


>gi|50913971|ref|YP_059943.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS10394]
 gi|50903045|gb|AAT86760.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS10394]
          Length = 581

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 25/234 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD- 288
               I+  F+T+ DIG+I +     +R+ NK  +        +EM+ +L  +M +  Q  
Sbjct: 398 D--SILSAFETN-DIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQID 452

Query: 289 -QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|21910063|ref|NP_664331.1| hypothetical protein SpyM3_0527 [Streptococcus pyogenes MGAS315]
 gi|28896239|ref|NP_802589.1| hypothetical protein SPs1327 [Streptococcus pyogenes SSI-1]
 gi|21904254|gb|AAM79134.1| putative protein [Streptococcus pyogenes MGAS315]
 gi|28811490|dbj|BAC64422.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 581

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 25/234 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD- 288
               I+  F+T+ DIG+I +     +R+ NK  +        +EM+ +L  +M +  Q  
Sbjct: 398 D--SILSAFETN-DIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQID 452

Query: 289 -QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|262282406|ref|ZP_06060174.1| rhamnosyltransferase [Streptococcus sp. 2_1_36FAA]
 gi|262261697|gb|EEY80395.1| rhamnosyltransferase [Streptococcus sp. 2_1_36FAA]
          Length = 582

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 28/249 (11%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           KIA+ +H++Y+DL  E  +   +   S+DL +T  T+S   K+EIL I       A + +
Sbjct: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFIT--TDSEKKKNEILDILEGKQAKAEVLV 341

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L     LS YDY+   H KKSK   Y  W G+ WR+ L  ++L  P 
Sbjct: 342 TGNVGRDVLPMLKL--KRHLSQYDYIGHFHTKKSKEADY--WAGESWRKELI-NMLVHPA 396

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK-L 291
              +I+        +G++ +     P+ +      +  N  +I     ++      QK +
Sbjct: 397 D--QIVSQLGQDDRLGLVIADI---PSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEV 451

Query: 292 DFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV- 342
           DF          GT  W + +AL P+ +L L+    P         I HA+ER       
Sbjct: 452 DFKQMNTFVMSYGTFVWFKYDALSPLFDLNLTEEDVPS-EPLPQNSILHAIERLLVYIAW 510

Query: 343 -KKANFRIS 350
            K+ +F+IS
Sbjct: 511 DKQYDFKIS 519


>gi|94988294|ref|YP_596395.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS9429]
 gi|94992170|ref|YP_600269.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS2096]
 gi|94541802|gb|ABF31851.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS9429]
 gi|94545678|gb|ABF35725.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS2096]
          Length = 581

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 25/234 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD- 288
               I+  F+T+ DIG+I +     +R+ NK  +        +EM+ +L  +M +  Q  
Sbjct: 398 D--SILSAFETN-DIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQID 452

Query: 289 -QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|94990172|ref|YP_598272.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS10270]
 gi|94543680|gb|ABF33728.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS10270]
          Length = 581

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 25/234 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD- 288
               I+  F+T+ DIG+I +     +R+ NK  +        +EM+ +L  +M +  Q  
Sbjct: 398 D--SILSAFETN-DIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQID 452

Query: 289 -QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|322373386|ref|ZP_08047922.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus sp.
           C150]
 gi|321278428|gb|EFX55497.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus sp.
           C150]
          Length = 594

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 104/233 (44%), Gaps = 22/233 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           KIA+ +H YY+DL  +      N   ++DL +T  T+S   K EI  I       ARI I
Sbjct: 288 KIAVHLHTYYVDLLDDFLRQFENFHFTYDLFLT--TDSEEKKKEIQSILDKHGKEARIFI 345

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDV+P L L   ++LS YDY+   H KKS    Y +W GD WR  LF  L+    
Sbjct: 346 TGNRGRDVIPMLKL--KDELSAYDYIGHFHTKKSPE--YPYWVGDSWRNELFSMLIQPAD 401

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR--EMICTLAGRM--GITFQD 288
               II   +    +G++ +    +  +Y        +NR  E +  L  RM  G     
Sbjct: 402 ---NIIANLEHDDRLGLVIADIPTF-FRYTKIVDPWNENRFAEGMNDLWERMDLGRDIDF 457

Query: 289 QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
            K++ F    GT  W + + L P+ +L L    E          I H++ER  
Sbjct: 458 DKMNTFIMSYGTFIWFKYDTLKPLFDLDLQDE-EIPAEPIPQHTILHSIERIL 509


>gi|312867647|ref|ZP_07727853.1| rhamnan synthesis protein F [Streptococcus parasanguinis F0405]
 gi|311096710|gb|EFQ54948.1| rhamnan synthesis protein F [Streptococcus parasanguinis F0405]
          Length = 582

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 26/254 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           K+A+ +H++Y+DL  E  +        +DL +T  T+    K  I KI       A + +
Sbjct: 285 KVAVHLHVFYVDLLEEFLDAFQAFHFVYDLWIT--TDVEEKKQTIEKILSNRAQDATVVV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L+L   EQLS YDYV   H KKSK   +  W G+ WR+ L  ++L  P 
Sbjct: 343 TGNIGRDVLPMLLL--KEQLSQYDYVGHFHTKKSKEADF--WAGESWRKELI-EMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGI--TFQ 287
              +I+   + +  +G+  +     +RY      +  +L      +  L  RMG   T  
Sbjct: 398 D--QILANMEANPKVGITIADIPTFFRYNRIVVAWNEALISPE--MNKLWERMGAAKTID 453

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            + L+ F    GT  W + +AL P+ +L L+    P         I HA+ER        
Sbjct: 454 FKNLNTFVMSYGTFVWFKYDALKPLFDLNLTAANVP-AEPLPQNSILHAIERLLIYIAWD 512

Query: 343 KKANFRISDVDCIL 356
           +K +FRIS    +L
Sbjct: 513 QKYDFRISQNPHVL 526


>gi|330882679|gb|EGH16828.1| hypothetical protein Pgy4_27710 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 608

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 17/243 (6%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKS-EILKIFPAAR-- 169
           A +  +AI +H++Y D   + ++ L+N  I+ D+ +TL   +   K+       P  +  
Sbjct: 96  AARLNVAICLHIFYEDYIEKFSHALANFPIAVDVFITLAAPNHKKKTIATFGQHPRVKNL 155

Query: 170 -IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
            +  + N GR+  P L+   ++ L  YD  C +H KKS    YS  E   W  +L   LL
Sbjct: 156 KVSCVPNRGRNFGPLLVEF-SKDLMAYDLFCHLHSKKSL---YSGREQTQWADYLTEYLL 211

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY---CDYTCSLGKNREMICTLAGRMGIT 285
               ++ +++  F  H+D+G+       YP  +     +   +  N+  +        I 
Sbjct: 212 RDANIITRLLNAFVDHKDLGLY------YPTTFWMMPSWVNHVTMNKAFMNAWHNEWQID 265

Query: 286 FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345
             +  L + AG MFW R EAL  +     +  F P+     DG + HA+ER   L  +K 
Sbjct: 266 PCEGFLSYPAGGMFWARPEALKEMLEKEYTYDFFPQEPLPNDGSMLHALERVIGLLAEKN 325

Query: 346 NFR 348
            ++
Sbjct: 326 GYK 328


>gi|320330331|gb|EFW86314.1| hypothetical protein PsgRace4_09215 [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 774

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 17/243 (6%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKS-EILKIFPAAR-- 169
           A +  +AI +H++Y D   + ++ L+N  I+ D+ +TL   +   K+       P  +  
Sbjct: 262 AARLNVAICLHIFYEDYIEKFSHALANFPIAVDVFITLAAPNHKKKTIATFGQHPRVKNL 321

Query: 170 -IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
            +  + N GR+  P L+   ++ L  YD  C +H KKS    YS  E   W  +L   LL
Sbjct: 322 KVSCVPNRGRNFGPLLVEF-SKDLMAYDLFCHLHSKKSL---YSGREQTQWADYLTEYLL 377

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY---CDYTCSLGKNREMICTLAGRMGIT 285
               ++ +++  F  H+D+G+       YP  +     +   +  N+  +        I 
Sbjct: 378 RDANIITRLLNAFVDHKDLGLY------YPTTFWMMPSWVNHVTMNKAFMNAWHNEWQID 431

Query: 286 FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345
             +  L + AG MFW R EAL  +     +  F P+     DG + HA+ER   L  +K 
Sbjct: 432 PCEGFLSYPAGGMFWARPEALKEMLEKEYTYDFFPQEPLPNDGSMLHALERVIGLLAEKN 491

Query: 346 NFR 348
            ++
Sbjct: 492 GYK 494


>gi|322516362|ref|ZP_08069287.1| rhamnosyltransferase [Streptococcus vestibularis ATCC 49124]
 gi|322125095|gb|EFX96488.1| rhamnosyltransferase [Streptococcus vestibularis ATCC 49124]
          Length = 581

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 32/257 (12%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           K+A+ +H++Y+DL  E  +        +DL +T  T+    K  I KI       A + +
Sbjct: 285 KVAVHLHVFYVDLLEEFLDAFQAFHFIYDLWIT--TDVEEKKQAIEKILSNRVQDATVVV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L+L   EQLS YDYV   H KKSK   +  W G+ WR+ L  ++L  P 
Sbjct: 343 TGNIGRDVLPMLLL--KEQLSRYDYVGHFHTKKSKEADF--WAGESWRKELI-EMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ 289
            +  I+   + +  +G+  +     +RY      +  +L      +  L  RMG T   +
Sbjct: 398 DL--ILANMEANPKVGITIADIPTFFRYNRIVVAWNEALISPE--MNKLWQRMGAT---K 450

Query: 290 KLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLS 341
            +DF +        GT  W + +AL P+ +L L+    P         I HA+ER     
Sbjct: 451 TIDFKSLNTFVMSYGTFVWFKYDALKPLFDLNLTAADVP-AEPLPQNSILHAIERLLIYI 509

Query: 342 V--KKANFRISDVDCIL 356
              +K +FRIS    +L
Sbjct: 510 AWDQKYDFRISQNPHVL 526


>gi|13476280|ref|NP_107850.1| hypothetical protein mlr7559 [Mesorhizobium loti MAFF303099]
 gi|14027041|dbj|BAB53995.1| mlr7559 [Mesorhizobium loti MAFF303099]
          Length = 644

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 32/257 (12%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEI---LKIFPAARIHI 172
            KIA+  H+YY D+  EI  L  N+ + +D   T  T +   K+EI   L   P  +  I
Sbjct: 297 GKIAVCAHIYYTDMLDEILGLTGNIPVPYDFIAT--TNTPEKKAEIETALANRPGVKNVI 354

Query: 173 M----ENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDL 227
           +    +N GRD+    I L    + + YD VC++H KKS +   S   G+L++R +  +L
Sbjct: 355 VRVVEQNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSM--GNLFKRHMVDNL 412

Query: 228 LGAPGVVFKIIRTFDTHRDIGMIGSRAYR--YPNKYCDYTCSLGKNREMICTLAGRMGIT 285
           L + G V  ++  F  +  +G+     +   YP     +  +  K  E    L   + + 
Sbjct: 413 LNSRGYVHNVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLL--NINVK 470

Query: 286 FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPK--------VHKALDGEIEHAVERC 337
           F +       GTMFW R  A        L + FE K            +DG   HA+ER 
Sbjct: 471 FDENTPVAAYGTMFWFRPRA--------LRKMFEHKWKWEEFNAEPDHVDGGFAHALERL 522

Query: 338 FSLSVKKANFRISDVDC 354
            + +V+ A +    + C
Sbjct: 523 IAYAVQNAGYTTQHIMC 539


>gi|320531350|ref|ZP_08032322.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320136441|gb|EFW28417.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 626

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 12/247 (4%)

Query: 109 VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKIFP- 166
           V++   + K+A++ HLY++DL         ++    DL +T+ + E A +     +  P 
Sbjct: 301 VVREPKQQKVALIAHLYFMDLLDSTLAYARSMPEGTDLILTVGSQEKAELVERACQDLPY 360

Query: 167 AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKK-SKRKGYSWWEGDLWRRWLFY 225
              + ++EN GRDV   L+  + + + +YD VC +H KK ++   Y+  EG  + R  F 
Sbjct: 361 NVDVRVIENRGRDVSALLVGCK-DIVDDYDLVCFMHDKKVTQLSPYTVGEG--FARKCFD 417

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN---REMICTLAGRM 282
           +LL     V  ++ TFD+   +G++      + + +  Y+ S G N    +M+      +
Sbjct: 418 NLLPTREFVENVVATFDSEPRLGLLSPTPPNHADYFPIYSYSWGPNFDRTKMLLEKELNL 477

Query: 283 GITFQDQKLDFFA--GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSL 340
            +     K +  A  GTMFW R  AL P+ +        P     +DG I HA+ER +  
Sbjct: 478 NVPLDAHK-EVIAPLGTMFWFRPAALKPLFDHDWQWEDFPPEPNDIDGTILHAIERAYGY 536

Query: 341 SVKKANF 347
             + + +
Sbjct: 537 VAQASGY 543


>gi|157151529|ref|YP_001450315.1| rhamnosyltransferase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|157076323|gb|ABV11006.1| rhamnosyltransferase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 582

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 114/249 (45%), Gaps = 28/249 (11%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           KIA+ +H++Y+DL  E  +   +   S+DL +T  T+S   K+EIL I       A + +
Sbjct: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFIT--TDSEKKKNEILGILEGKQAKAEVFV 341

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L     LS YDY+   H KKSK   Y  W G+ WR+ L  ++L  P 
Sbjct: 342 TGNVGRDVLPMLKL--KRHLSQYDYIGHFHTKKSKEADY--WAGESWRKELI-NMLVHPA 396

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK-L 291
              +I+        +G++ +     P+ +      +  N  +I     ++      QK +
Sbjct: 397 D--QIVSQLGQDDCLGLVIADI---PSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEV 451

Query: 292 DFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV- 342
           DF          GT  W + +AL P+ +L ++    P         I HA+ER       
Sbjct: 452 DFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPS-EPLPQNSILHAIERLLVYIAW 510

Query: 343 -KKANFRIS 350
            K+ +F+IS
Sbjct: 511 DKQYDFKIS 519


>gi|15672189|ref|NP_266363.1| polysaccharide biosynthesis protein [Lactococcus lactis subsp.
           lactis Il1403]
 gi|12723062|gb|AAK04305.1|AE006258_8 polysaccharide biosynthesis protein [Lactococcus lactis subsp.
           lactis Il1403]
          Length = 589

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 21/269 (7%)

Query: 94  FPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT- 152
           +P L     S  +  + +  +   +A+ +H+YY +L  E  +   N S  +DL++T  T 
Sbjct: 265 YPDLNFLLPSKMITPLSKTVLHQTVAVHLHVYYPELLEEFLDAFKNFSFDYDLYLTTNTD 324

Query: 153 ESASIKSEILKIFPA-ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGY 211
           E   I  E+LK   A A++    NHGRD++PFL L   E+L  YD V   H K+S    +
Sbjct: 325 EKEEIIKEMLKCKDAKAKLVRTPNHGRDIVPFLAL--KEELKKYDIVGHFHTKRSLEAAF 382

Query: 212 SWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSL 268
             + G+ WR  L   L+        I+  F+  + +G++ +     +R+ NK  +     
Sbjct: 383 --FAGESWRTELISMLIEPAD---NIMAHFEQKQKLGIVIADIPSFFRF-NKIVNADNEN 436

Query: 269 GKNREMICTLAGRMGITFQDQKLDFFA-----GTMFWVRTEALDPIKNLRLSRYFEPKVH 323
            +   ++  +  RM +  +    DF       GT FW + E L+P+ NL +     P   
Sbjct: 437 KQIAPIMNDIWKRMKMNKKVNFHDFNTFTMSYGTFFWAKIEVLEPLFNLEIMDREIPN-E 495

Query: 324 KALDGEIEHAVERCFSLSV--KKANFRIS 350
                 I HA+ER        K+ +F IS
Sbjct: 496 PLPQNTILHAIERVLIYLAWDKEMDFNIS 524


>gi|163853098|ref|YP_001641141.1| lipopolysaccharide biosynthesis protein-like protein
           [Methylobacterium extorquens PA1]
 gi|163664703|gb|ABY32070.1| Lipopolysaccharide biosynthesis protein-like protein
           [Methylobacterium extorquens PA1]
          Length = 916

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 21/230 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP-----AARIH 171
           K A +VH +Y +L  EI   L   +   D++V+  T+ +    +I+ +          + 
Sbjct: 250 KAAAIVHGFYPELMEEILIYLGKSNFPIDIYVS--TDDSKKAEQIISMGKKYHNGQLDVR 307

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
           I+ N GRD+ P L    ++   NY+    IH KKS   G        WR +LF +L+G+ 
Sbjct: 308 IISNRGRDIGPMLTGF-SDVFDNYEAFLHIHTKKSPHGGDGLSS---WRDYLFKNLIGSA 363

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL--GKNREMICTLAGRMGITF-QD 288
            ++   +    T R++G +      YP         L  G N + + +L  R+G+   +D
Sbjct: 364 EIIDSNLHILGT-RNVGFV------YPQHLYALRGILNWGYNFDTVSSLLRRVGVRLSKD 416

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
             L+F +G+MFW RT AL  + +L L           +DG + HA+ER F
Sbjct: 417 MVLEFPSGSMFWARTAALHGLLSLDLKLEDFDNEAGQVDGTLGHAIERSF 466


>gi|325276923|ref|ZP_08142610.1| hypothetical protein G1E_25356 [Pseudomonas sp. TJI-51]
 gi|324097938|gb|EGB96097.1| hypothetical protein G1E_25356 [Pseudomonas sp. TJI-51]
          Length = 758

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 17/261 (6%)

Query: 95  PQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES 154
           P+    +E     ++   A   KIAI +H+YY D     A  L       DL +T+  ES
Sbjct: 228 PKWTPKFEINPASELTPKASNQKIAICLHIYYDDYIERFAEALYTFPTEVDLLITIANES 287

Query: 155 ASIKS--EILKIFPAARIHI--MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
              ++     KI    ++ I  + N GR+  P L+    E L+ YD +C +H KKS    
Sbjct: 288 FRDRAYQTFSKIQAVKKVTIKSVPNRGRNFGPLLVEFAQELLT-YDLLCHLHSKKSL--- 343

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY---CDYTCS 267
           YS  E   W  +L   LL    VV +++  F  +   G+       YP  +     +   
Sbjct: 344 YSGREQTQWADYLSEYLLNDCSVVKRVLNAFSDNPQFGVY------YPTTFWMMPSWVNH 397

Query: 268 LGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALD 327
           +  N+  +  L   +G    D  L + AG MFW R +AL  I N   +    P      D
Sbjct: 398 VTMNKPHMRNLQTALGFGHFDDFLSYPAGGMFWARPKALVDILNKTYTYDDFPNEPLPND 457

Query: 328 GEIEHAVERCFSLSVKKANFR 348
           G + HA+ER      +K  ++
Sbjct: 458 GSMLHALERVIGPVCEKNGYQ 478


>gi|331086190|ref|ZP_08335272.1| hypothetical protein HMPREF0987_01575 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406349|gb|EGG85863.1| hypothetical protein HMPREF0987_01575 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 592

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 12/239 (5%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIF---PAAR--IH 171
           KIA+V+HLY+ DL  E  + +S +    D+++T  TE    K+ I K+F   P  +  + 
Sbjct: 257 KIALVMHLYFEDLLEESYHYVSAMPEKADIYLTTDTEKK--KAAIEKVFAKLPCNKLEVR 314

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
           +++N GRDV   L+ ++ + + +YD VC  H KK+ +       G  +    F + L   
Sbjct: 315 VIKNRGRDVSSLLVGVK-DVIMDYDLVCFAHDKKTAQVKPGTI-GASFAYKCFENTLSNK 372

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKL 291
             V  +I TF  +  +G++      +   +       G N  +   LA ++G+T      
Sbjct: 373 AYVGNVINTFVNNPRMGLLCPPEPNHSTFFTTIGFEWGPNFNITRDLAKKLGLTVPISVA 432

Query: 292 DFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
                  GTMFW R +A+ P+ N        P     +DG + HA+ER +   V+++ +
Sbjct: 433 SPPVAPLGTMFWFRPKAMKPLYNKDWKYEDFPAEPNKIDGTLLHAIERIYPFIVQESGY 491


>gi|329116186|ref|ZP_08244903.1| rhamnan synthesis protein F [Streptococcus parauberis NCFD 2020]
 gi|326906591|gb|EGE53505.1| rhamnan synthesis protein F [Streptococcus parauberis NCFD 2020]
          Length = 589

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 29/240 (12%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIF----PAA 168
            I  K+AI +H +Y+DL  E  +   N    +DL +T  T+    K++I  +       A
Sbjct: 287 VINKKVAIHLHTFYVDLLQEFLSAFENFHFDYDLFIT--TDIEEKKTQIENVLNENNQKA 344

Query: 169 RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
            + +  N GRDVLP L+L   E+LS YDY+   H KKSK   +  W G+ WR+ L   +L
Sbjct: 345 EVFVTGNIGRDVLPMLLL--KEKLSVYDYIGHFHTKKSKEADF--WAGESWRKELI-KML 399

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN--REMICTLAGRMGITF 286
             P     I+ T + ++ +G++ +    Y  +Y     +  +N     +  L  +MG+T 
Sbjct: 400 VLPAD--SILATLEKNK-VGIVIADMPTY-FRYNKIVTAWNENLIAPEMNELWKKMGLT- 454

Query: 287 QDQKLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
             + +DF          GT  W + +AL P+ +L L+    P         I HA+ER  
Sbjct: 455 --KSIDFNHLHTFVMSYGTFVWFKYDALKPLFDLNLTVEDVP-AEPLPQNSILHAIERLL 511


>gi|225352528|ref|ZP_03743551.1| hypothetical protein BIFPSEUDO_04151 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156722|gb|EEG70116.1| hypothetical protein BIFPSEUDO_04151 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 648

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 13/246 (5%)

Query: 109 VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKIFP- 166
           +  I    +IA+++HLYY+DL  +      ++    D   T+ + E+A+I  E  K  P 
Sbjct: 302 IAPIPTNKRIALIMHLYYMDLLDKTLEYAKSMPEGCDFIFTVGSEENATIVRERCKDLPY 361

Query: 167 AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKK-SKRKGYSWWEGDLWRRWLFY 225
              + +++N GRDV   L+    + L  YDYVC  H KK ++   YS   GD +    F 
Sbjct: 362 NVDVRVIQNRGRDVSALLVGAGKDCLQ-YDYVCFAHDKKVTQLSPYSI--GDGFSYKCFE 418

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNRE-----MICTLAG 280
           ++LG+  +V  II  F+     G++      + + + ++    G N E     +  TL  
Sbjct: 419 NVLGSKALVSNIINHFENDPHAGVLAPAPPNHADYFGNFASLWGPNYEGTKKMLEETLQV 478

Query: 281 RMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSL 340
           ++ +    + +    GTMFW R +AL    ++       P     +DG + H VER +  
Sbjct: 479 KVPLDKSKEPIAPM-GTMFWFRPKALQQFFDIDWKYEDFPPEPNKIDGSMLHFVERAYGY 537

Query: 341 SVKKAN 346
            V +AN
Sbjct: 538 -VPQAN 542


>gi|312866008|ref|ZP_07726229.1| rhamnan synthesis protein F [Streptococcus downei F0415]
 gi|311098412|gb|EFQ56635.1| rhamnan synthesis protein F [Streptococcus downei F0415]
          Length = 584

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 107 GKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP 166
            +  ++  ++K+A+ +H++Y+DL  E  +       ++DL +T  T+    ++EI  I  
Sbjct: 276 AEAEELPAESKVAVHLHVFYVDLLQEFLDAFKTFHFAYDLFIT--TDKEEKRAEIQAILE 333

Query: 167 A----ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRW 222
                A+I +  N GRDVLP L L   +QL  YDY+   H KKSK   Y  W G  WR+ 
Sbjct: 334 QNQVLAQIFVTGNIGRDVLPMLKL--KDQLKGYDYIGHFHTKKSKEADY--WAGQSWRQE 389

Query: 223 LFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSL--GKNREMICT 277
           L   L+       +I+     +  +G++ +     +R+      +  +L   +  E+   
Sbjct: 390 LIAMLVKPAN---QILAQMAKNDRLGIVIADMPSFFRFNKIVVAWNENLIAPEMEELWEK 446

Query: 278 LAGRMGITFQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAV 334
           ++ +  I F  + +D F    GT  W + +AL P+ +L L+  + P         I HA+
Sbjct: 447 MSLKKSIDF--KAMDTFVMSYGTYAWFKYDALSPLFDLDLTDEYVP-AEPLPQNSILHAI 503

Query: 335 ERCF 338
           ER  
Sbjct: 504 ERLL 507


>gi|116511036|ref|YP_808252.1| lipopolysaccharide biosynthesis protein [Lactococcus lactis subsp.
           cremoris SK11]
 gi|116106690|gb|ABJ71830.1| Lipopolysaccharide biosynthesis protein [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 588

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 34/290 (11%)

Query: 94  FPQLLHGWESPAMGKVMQIAIKA--KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           +P   +  E   +    +++ K   KI I +H +Y+DL  E  N       ++DL++T  
Sbjct: 274 YPDREYMLEEKTLKFTKEVSAKTNLKIGIHLHAFYLDLIPEYLNYFDKYVQNYDLYITTD 333

Query: 152 TESASIKSEILKIFPAARIH---IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
           TE      EILK +P  +I    +  N GRDVLP++ +  +E +++YD     H KKSK 
Sbjct: 334 TEEKY--EEILKNYPLPQIKKVIVTGNKGRDVLPWMQV--SELMTDYDLCGHFHTKKSKD 389

Query: 209 KGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL 268
               W  G+ WRR + Y LL     +F   + F+ +  +G+I +    +   +  Y  + 
Sbjct: 390 N--DWIVGESWRRDIEYSLLEPAQAIF---QEFEKNPKLGLIIADVPSFFEHF--YGPTY 442

Query: 269 GKNREMICTLAGR-MGITFQDQK----LDFFA---GTMFWVRTEALDPIKNLRLSRYF-- 318
              R++   +      I F++ K     D +    GTM W R +AL+ + N+ +      
Sbjct: 443 ITERDIWPDMQEIWQKIDFENSKELKQKDSYVMSYGTMIWYRPQALNNLLNVNIQADVPE 502

Query: 319 EPKVHKALDGEIEHAVERCFSLSVKKAN---FRISDVDCILGYRKSLSQN 365
           EP  + +    I HA ER   + V  AN   FRIS +    G+  + S N
Sbjct: 503 EPLPYNS----ILHAFERLL-VYVSWANGYDFRISQIQTNNGFVANFSAN 547


>gi|154509526|ref|ZP_02045168.1| hypothetical protein ACTODO_02058 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799160|gb|EDN81580.1| hypothetical protein ACTODO_02058 [Actinomyces odontolyticus ATCC
           17982]
          Length = 620

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 18/254 (7%)

Query: 109 VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSEILKIFP 166
            +  A   KI  V H++Y D+  EI + LS L   + L  T   E   A I++   +   
Sbjct: 290 TLDAAASLKILAVAHIFYADMADEILDRLSVLPAGYHLVATTSNEENKALIEARAQERGV 349

Query: 167 AARIHIM-ENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWRRWLF 224
            A + ++  N GRD+  FL+       S  YD V KIH KKS +  Y+  +  L++  L+
Sbjct: 350 DADVRVVSSNRGRDIGAFLVDCNDVLTSGEYDIVVKIHSKKSVQDDYNAAQ--LFKEHLY 407

Query: 225 YDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----KNREMICTLAG 280
            +LL +   V  I+  F  H  +GM+ +     P  +  Y  ++G     NR      A 
Sbjct: 408 DNLLASSDHVASILAEFAAHPGLGMVIA-----PMPHMGYP-TMGHAWFANRAPARDFAK 461

Query: 281 RMGIT--FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           ++GIT  F D +     G+MF  R EAL  +    L     P+     DG + H +ER  
Sbjct: 462 KVGITVPFDDHQPLAPYGSMFIARPEALSLLTGAGLVPEDFPEEGGYKDGSLAHVIERLL 521

Query: 339 SLSVKKANFRISDV 352
           S +V    + +  V
Sbjct: 522 SYAVLSRGYYVRPV 535


>gi|323135560|ref|ZP_08070643.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
 gi|322398651|gb|EFY01170.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
          Length = 812

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 17/241 (7%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKIFPAAR-- 169
           A +  IA +VH +Y ++   +   L N++   DL  +  T E      ++ + +P  R  
Sbjct: 142 ARERPIAAIVHGFYPEIAPLVLEKLKNVTGPVDLFFSTDTQEKKHALEDVCRDWPKGRVE 201

Query: 170 IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
           I I  N GRD+         +  ++YD    +H K+S   G +      WR +LF +LLG
Sbjct: 202 IRICPNRGRDIAAKFFGFR-DVYADYDLFIHLHTKRSPHGGAALAR---WRDYLFDNLLG 257

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL--GKNREMICTLAGRMGITF- 286
           +P +V  I+  FD  + IG++      +P    +    L  G + +    L  RMG+   
Sbjct: 258 SPEIVNSILSLFDDPK-IGVV------FPQHLFELRGILNWGYDYDHARALMKRMGVEID 310

Query: 287 QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
           ++  L+F +G+MFW R+ A  P+ +L +     P+    +DG + HA+ER   +  +   
Sbjct: 311 KNLVLEFPSGSMFWGRSAAFRPLLDLDIDFDDFPQEGGQVDGTLAHAIERSLLMIAESRG 370

Query: 347 F 347
           F
Sbjct: 371 F 371


>gi|320325880|gb|EFW81940.1| hypothetical protein PsgB076_04646 [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 774

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 17/243 (6%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKS-EILKIFPAAR-- 169
           A +  +AI +H++Y D   + ++ L+N  I+ D+ +TL   +   K+       P  +  
Sbjct: 262 AARLNVAICLHIFYEDYIEKFSHALANFPIAVDVFITLAAPNHKKKTIATFGQHPRVKNL 321

Query: 170 -IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
            +  + N  R+  P L+   ++ L  YD  C +H KKS    YS  E   W  +L   LL
Sbjct: 322 KVSCVPNRERNFGPLLVEF-SKDLMAYDLFCHLHSKKSL---YSGREQTQWADYLTEYLL 377

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY---CDYTCSLGKNREMICTLAGRMGIT 285
               ++ +++  F  H+D+G+       YP  +     +   +  N+  +        I 
Sbjct: 378 RDANIITRLLNAFVDHKDLGLY------YPTTFWMMPSWVNHVTMNKAFMNAWHNEWQID 431

Query: 286 FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345
             +  L + AG MFW R EAL  +     +  F P+     DG + HA+ER   L  +K 
Sbjct: 432 PCEGFLSYPAGGMFWARPEALKEMLEKEYTYDFFPQEPLPNDGSMLHALERVIGLLAEKN 491

Query: 346 NFR 348
            ++
Sbjct: 492 GYK 494


>gi|293189412|ref|ZP_06608132.1| rhamnan synthesis protein F [Actinomyces odontolyticus F0309]
 gi|292821502|gb|EFF80441.1| rhamnan synthesis protein F [Actinomyces odontolyticus F0309]
          Length = 620

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 18/254 (7%)

Query: 109 VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSEILKIFP 166
            +  A   K+  V H++Y D+  EI + LS L   + L  T   E   A I++   +   
Sbjct: 290 TLDAAASLKVLAVAHIFYADMADEILDRLSVLPAGYHLVATTSNEENKALIEAHAQERGV 349

Query: 167 AARIHIM-ENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWRRWLF 224
            A + ++  N GRD+  FL+       S  YD V KIH KKS +  Y+  +  L++  L+
Sbjct: 350 DADVRVVSSNRGRDIGAFLVDCNDVLTSGEYDIVVKIHSKKSVQDDYNAAQ--LFKEHLY 407

Query: 225 YDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----KNREMICTLAG 280
            +LL +   V  I+  F  H  +GM+ +     P  +  Y  ++G     NR      A 
Sbjct: 408 DNLLASSDHVASILAKFAAHPGLGMVIA-----PMPHMGYP-TMGHAWFANRAPARDFAK 461

Query: 281 RMGIT--FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           ++GIT  F D +     G+MF  R EAL  +    L     P+     DG + H +ER  
Sbjct: 462 KVGITVPFDDHQPLAPYGSMFIARPEALSLLTGAGLVPEDFPEEGGYKDGSLAHVIERLL 521

Query: 339 SLSVKKANFRISDV 352
           S +V    + +  V
Sbjct: 522 SYAVLSRGYYVRPV 535


>gi|94994091|ref|YP_602189.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS10750]
 gi|94547599|gb|ABF37645.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS10750]
          Length = 581

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 23/233 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA--YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD-- 288
               I+  F+T     +I      +R+ NK  +        +EM+ +L  +M +  Q   
Sbjct: 398 D--SILSVFETDDIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQIDF 453

Query: 289 QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           Q +D F    GT  W + +AL  + +L L++   P         I HA+ER F
Sbjct: 454 QAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLF 505


>gi|71903253|ref|YP_280056.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS6180]
 gi|71802348|gb|AAX71701.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS6180]
          Length = 581

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 23/233 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+    
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD 398

Query: 233 VVFKIIRTFDTHRDIGMIGS--RAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD-- 288
            +  +  T D    I  I S  R  +  N + ++  +    +EM+ +L  +M +  Q   
Sbjct: 399 SILSVFETDDIGIIIADIPSFFRFNKIVNAWNEHLIA----QEMM-SLWRKMDVKKQIDF 453

Query: 289 QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           Q +D F    GT  W + +AL  + +L L++   P         I HA+ER F
Sbjct: 454 QAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLF 505


>gi|312133751|ref|YP_004001090.1| protein [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773029|gb|ADQ02517.1| Hypothetical protein BBMN68_1492 [Bifidobacterium longum subsp.
           longum BBMN68]
          Length = 641

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 110/241 (45%), Gaps = 11/241 (4%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES-ASIKSEILK 163
           +      I  K ++A+V+HLYY+D+  +I     ++    D+ +T+ +E  A I  E  +
Sbjct: 298 SQDNAQPIPQKFRVALVLHLYYMDILDQILRYARSMPEGCDVIITVGSEEKACIVKERCE 357

Query: 164 IFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRW 222
             P    + ++EN GRDV   L+    + L NYD VC  H KK  R+      GD + + 
Sbjct: 358 GMPYNIDVRVIENRGRDVSALLVGAGKDVL-NYDLVCFAHDKKV-RQLRPETIGDGFAKK 415

Query: 223 LFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRM 282
            F + L +   V  II  F  +  +G+    A  + + +  Y  S G N      L   +
Sbjct: 416 CFENTLASKAYVANIINLFADNPRLGVAMPSAPNHADYFYSYAFSWGPNYRGTKDLLDGL 475

Query: 283 GITFQ-DQKLDFFA--GTMFWVRTEALDPI--KNLRLSRYFEPKVHKALDGEIEHAVERC 337
           GI        D  A  GTMFW R +AL  +  K+   S  F P+ + A DG   H VER 
Sbjct: 476 GIKVPLSPHADVIAPLGTMFWFRPKALHGLIDKSWEYSD-FPPEPNPA-DGSFLHFVERA 533

Query: 338 F 338
           +
Sbjct: 534 Y 534


>gi|15674835|ref|NP_269009.1| hypothetical protein SPy_0792 [Streptococcus pyogenes M1 GAS]
 gi|71910421|ref|YP_281971.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS5005]
 gi|13621968|gb|AAK33730.1| conserved hypothetical protein - possibly involved in cell wall
           localization and side chain formation of
           rhamnose-glucose polysaccharide [Streptococcus pyogenes
           M1 GAS]
 gi|71853203|gb|AAZ51226.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS5005]
          Length = 581

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 23/233 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      N +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFENWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA--YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD-- 288
               I+  F+T     +I      +R+ NK  +        +EM+ +L  +M +  Q   
Sbjct: 398 D--SILSAFETDDIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQIDF 453

Query: 289 QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 454 QAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|320095829|ref|ZP_08027469.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977239|gb|EFW08942.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 619

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 18/248 (7%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES--ASIKSEIL 162
           A  +  + A   ++  + H++Y D+  EI + LS L   + L  T   E   A+I+  + 
Sbjct: 286 AAPEAREKAASLRVVAIAHIFYADMADEIIDRLSVLPDGWRLVATTADEERKAAIEETMA 345

Query: 163 KIFPAARIHIM-ENHGRDVLPFLI-LLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWR 220
           +     ++ ++  N GRD+  FL+   +     +YD V KIH KKS +   +     L++
Sbjct: 346 RRGAVGQVRVVASNRGRDISAFLVDCSDVLAGDDYDVVVKIHSKKSVQDEAN--AAQLFK 403

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----KNREMIC 276
             L+ +LL +   V  I+  F  H  +GM  +     P  +  Y  ++G     NR    
Sbjct: 404 DHLYENLLDSKDHVANILAEFADHPGLGMALA-----PMPHMGYP-TMGHAWFANRPPAR 457

Query: 277 TLAGRMGIT--FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAV 334
            LA R+GIT  F D +     G+MF  R  AL P+    L+    P      DG + H +
Sbjct: 458 ELAKRIGITVPFDDHQPLAPYGSMFIARPRALRPLVEAGLTHDDFPPEGGYQDGSLAHVI 517

Query: 335 ERCFSLSV 342
           ER  + +V
Sbjct: 518 ERLLAYAV 525


>gi|332535404|ref|ZP_08411194.1| glycosyl transferase, group 1 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035169|gb|EGI71680.1| glycosyl transferase, group 1 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 672

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 17/239 (7%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKS----EILKIFPAARIHI 172
           K+A+  H++Y +        L+  +   D+ V++ +E  + K+    +         + +
Sbjct: 164 KLAMCFHVFYGEFIDYYCGALAKFTQQVDVFVSVASEELAKKAIHDFKACSKVNKVVVKV 223

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
           + NHGR+  P L+   ++ L NYD  C +H KKS   G +  +   W  +L   LL  P 
Sbjct: 224 VPNHGRNFGPMLVEFASD-LQNYDLFCHMHSKKSLYSGRAQTQ---WADYLGEYLLNDPH 279

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKY---CDYTCSLGKNREMICTLAGRMGITFQDQ 289
           V+ +++  F+ +   G+       YP  +    D+     KN+        +  I  +D 
Sbjct: 280 VIKQVLNHFNDNPKSGLY------YPTSFWMMPDWVNHWLKNKPAAQKFTKKWNIELKDD 333

Query: 290 KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
            L + AG MFW R EAL  + N        P      DG   HA+ER   L V+K  ++
Sbjct: 334 FLAYPAGGMFWARPEALKQLLNKEYKYDDFPGEPLPNDGSQLHALERMLGLLVEKNGYK 392


>gi|78184210|ref|YP_376645.1| lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9902]
 gi|78168504|gb|ABB25601.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9902]
          Length = 1161

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 34/252 (13%)

Query: 107 GKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP 166
           GK++    + K  + +H++Y +L   IA+ +  + +  D+H++   ++ S  +EI K   
Sbjct: 192 GKLISSIGQKKFGVFLHIFYPELAPIIADYIRKIPVKIDIHISTTHDAISGLTEIFKGLE 251

Query: 167 AA---RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGY--SWWEGDLWRR 221
            +   ++    N GRDV PF++    E++  YDY+ K+H KKS        W+E  L   
Sbjct: 252 NSLNVQVKSFPNIGRDVAPFIVGFR-EEIPKYDYILKLHSKKSPHSNALSGWFEHCL--- 307

Query: 222 WLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG-----------K 270
               +L+G+  V +  I+  +   DI ++      YP +  +Y  SLG            
Sbjct: 308 ---DNLIGSIDVFYTNIQELNK-EDISIV------YPVE--NYALSLGIKHDSCWGHEDG 355

Query: 271 NREMICTLAGRMGITFQDQKLDFF--AGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDG 328
           N     TL  ++G+   ++  +F    G MFW + + L PI +  L           +DG
Sbjct: 356 NYNKAKTLLKKLGLEQINRNSEFLFPTGNMFWCKPDILKPILDWDLKFEDFDNEGGQIDG 415

Query: 329 EIEHAVERCFSL 340
            + H++ER   L
Sbjct: 416 TLAHSIERLIGL 427


>gi|319939379|ref|ZP_08013739.1| RgpFc protein [Streptococcus anginosus 1_2_62CV]
 gi|319811365|gb|EFW07660.1| RgpFc protein [Streptococcus anginosus 1_2_62CV]
          Length = 587

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 117/255 (45%), Gaps = 41/255 (16%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHI 172
           KI + +H++Y+DL  +      N   ++DL +T  T++ + K EI  I       A I +
Sbjct: 291 KIGVHLHVFYVDLLEDFLKAFENFHFAYDLFIT--TDNDTKKLEIEAILNQNHKNAHIFV 348

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L L   + LS YDY+   H KKSK   +  W G+ WR  L  D+L  P 
Sbjct: 349 TGNIGRDVLPMLKL--KKYLSTYDYIGHFHTKKSKEADF--WAGESWRNELI-DMLIKPA 403

Query: 233 VVFKIIRTFDTHRDIGMIGSRA---YRYPNKYCDYTCSLGKNREMICT----LAGRMGIT 285
               I+  F+  + +G++ S     +RY NK  D       N  +I      L  +M +T
Sbjct: 404 D--NILANFENDK-LGLVISDIPTFFRY-NKIVD-----AWNEHLIAPEMNDLWYKMKMT 454

Query: 286 FQDQKLDFFA--------GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
              + +DF          GT  W + +AL P+ +L L+    P +       I HA+ER 
Sbjct: 455 ---KPIDFNTFHTFVMSYGTFIWFKYDALKPLFDLDLTDKDVP-IEPLPQNSILHAIERL 510

Query: 338 FSLSV--KKANFRIS 350
                  +  +FRIS
Sbjct: 511 IVYVAWNEHYDFRIS 525


>gi|19745874|ref|NP_607010.1| hypothetical protein spyM18_0853 [Streptococcus pyogenes MGAS8232]
 gi|19748025|gb|AAL97509.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 581

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 23/233 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA--YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD-- 288
               I+  F+T     +I      +R+ NK  +        +EM+ +L  +M +  Q   
Sbjct: 398 D--SILSAFETDDIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQIDF 453

Query: 289 QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 454 QAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|139474025|ref|YP_001128741.1| rhamnan synthesis protein F family protein [Streptococcus pyogenes
           str. Manfredo]
 gi|134272272|emb|CAM30524.1| rhamnan synthesis protein F family protein [Streptococcus pyogenes
           str. Manfredo]
          Length = 581

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 23/233 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA--YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD-- 288
               I+  F+T     +I      +R+ NK  +        +EM+ +L  +M +  Q   
Sbjct: 398 D--SILSAFETDDIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQIDF 453

Query: 289 QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 454 QAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|56808559|ref|ZP_00366292.1| COG3754: Lipopolysaccharide biosynthesis protein [Streptococcus
           pyogenes M49 591]
          Length = 581

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 23/233 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA--YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD-- 288
               I+  F+T     +I      +R+ NK  +        +EM+ +L  +M +  Q   
Sbjct: 398 D--SILSAFETDDIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQIDF 453

Query: 289 QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 454 QAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|306827605|ref|ZP_07460885.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes ATCC 10782]
 gi|304430168|gb|EFM33197.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes ATCC 10782]
          Length = 581

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 23/233 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA--YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD-- 288
               I+  F+T     +I      +R+ NK  +        +EM+ +L  +M +  Q   
Sbjct: 398 D--SILSAFETDDIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQIDF 453

Query: 289 QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 454 QAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|119026520|ref|YP_910365.1| hypothetical protein BAD_1502 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118766104|dbj|BAF40283.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 647

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 12/231 (5%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE-SASIKSEILKIFP-AARIHIME 174
           +IA+++HLYY+DL  +      ++    D   T+ +E +A +  E  K  P    + +++
Sbjct: 309 RIALIMHLYYMDLLDKTLEYAKSMPEGCDFIFTVGSEENAKLVRERCKGLPYNVDVRVIQ 368

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKK-SKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           N GRDV   LI    + L  YDYVC  H KK ++   YS  +G  ++   F ++LG+  +
Sbjct: 369 NRGRDVSALLIGAGKDCLK-YDYVCFAHDKKVTQLSPYSIGDGFAYK--CFENILGSKAL 425

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNRE-----MICTLAGRMGITFQD 288
           V  II  F+     G++   +  + + + ++    G N E     +  TL  ++ +    
Sbjct: 426 VSNIINHFEQDPHAGLLAPTSPNHADYFGNFASLWGPNFEGTKKMLEETLGVKVPLNPYK 485

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
           + +    GTMFW R +AL  + ++       P     +DG + H +ER + 
Sbjct: 486 EPIAPL-GTMFWFRPKALHQLFDIDWKYEDFPPEPNKIDGSMLHFIERAYG 535


>gi|209559162|ref|YP_002285634.1| RgpFc protein [Streptococcus pyogenes NZ131]
 gi|209540363|gb|ACI60939.1| RgpFc protein [Streptococcus pyogenes NZ131]
          Length = 581

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 23/233 (9%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP----AARIHI 172
           K+A+ +H++Y+DL  E      + +  +DL +T  T+S   + EI +I       A I +
Sbjct: 285 KVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFIT--TDSDIKRKEIKEILQRKGKTADIRV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L  D+L  P 
Sbjct: 343 TGNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELI-DMLVKPA 397

Query: 233 VVFKIIRTFDTHRDIGMIGSRA--YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD-- 288
               I+  F+T     +I      +R+ NK  +        +EM+ +L  +M +  Q   
Sbjct: 398 D--SILSAFETDDIGIIIADIPSFFRF-NKIVNAWNEHLIAQEMM-SLWRKMDVKKQIDF 453

Query: 289 QKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           Q +D F    GT  W + +AL  + +L L++   P         I HA+ER  
Sbjct: 454 QAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPS-EPLPQNSILHAIERLL 505


>gi|158422520|ref|YP_001523812.1| putative lipopolysaccharide biosynthesis protein [Azorhizobium
           caulinodans ORS 571]
 gi|158329409|dbj|BAF86894.1| putative lipopolysaccharide biosynthesis protein [Azorhizobium
           caulinodans ORS 571]
          Length = 661

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 112/262 (42%), Gaps = 28/262 (10%)

Query: 100 GWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIK 158
           G   PA   V    ++   +A VVH YY DL   +  L++ L  +  L VT   E A   
Sbjct: 381 GARRPAAAPVTPRPVRTGSLASVVHGYYEDL---LPGLIAGLDPAH-LFVTTPPEKAEAV 436

Query: 159 SEILKIFPAARIHI-MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGD 217
             +L     A     +EN GRDV PFL LL   +   YD V K+H K+S  +G    EG 
Sbjct: 437 RAVLARAAPAARLRVVENRGRDVRPFLSLLPELEAEGYDLVLKVHTKRSPHQGK---EGS 493

Query: 218 LWRRWLFYDLLGAPGVVFKIIRT------FDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN 271
            W + L        G + K+ R+      F+ H  +G++G+  +        Y  S G N
Sbjct: 494 DWLQRLS-------GPLLKLARSERLAPVFEAHPQMGLLGAAGHVLDGAL--YAGSAG-N 543

Query: 272 REMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNL-RLSRYFEPKVHKALDGEI 330
              +  LA  +G T       + AGTMF  R     P++    L   F+  +    DG +
Sbjct: 544 AAWMRRLAAELG-TGAPLTSPYVAGTMFVARLGIFAPLRGASELLDLFDTDMGLK-DGTL 601

Query: 331 EHAVERCFSLSVKKANFRISDV 352
            HA ER F +   +A   + +V
Sbjct: 602 AHAFERFFGVLAAEAGLSVGEV 623


>gi|116071634|ref|ZP_01468902.1| hypothetical protein BL107_05779 [Synechococcus sp. BL107]
 gi|116065257|gb|EAU71015.1| hypothetical protein BL107_05779 [Synechococcus sp. BL107]
          Length = 934

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 17/230 (7%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARI---- 170
           + ++AI +H+YY +   E    L+ L     L +T  T ++  K  I++I   A +    
Sbjct: 43  ECQVAIYLHIYYPESLHEFLEYLTVLPSQIRLVIT--TTTSEKKELIIEILERALLINRL 100

Query: 171 ---HIM-ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYD 226
              H+  EN GRD+  F+ + +  +L  YD VCK+H KKS   G     G  W R+L   
Sbjct: 101 DLCHVYHENKGRDIGAFINIYD--ELIKYDVVCKLHAKKSPHLGEF---GKSWFRYLIRS 155

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
            +G    +  I+      +DIG++   +++  N + D+  +   ++  I        +  
Sbjct: 156 TIGNQSAIENIVNILYHSKDIGILAPTSFQGTNNH-DWASNFDISQS-ISDHIFNSELDI 213

Query: 287 QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
             +KL + + T+FW + EAL+  +   +   F P+    +DG   H++ER
Sbjct: 214 NKEKLRYPSATVFWFKPEALNQQQFRSIQPDFFPEEPIPIDGTTAHSLER 263


>gi|13476282|ref|NP_107852.1| hypothetical protein mlr7561 [Mesorhizobium loti MAFF303099]
 gi|14027043|dbj|BAB53997.1| mlr7561 [Mesorhizobium loti MAFF303099]
          Length = 609

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 15/239 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL--VTESASIKSEILKIFPA--ARIHI 172
           +IA++ H+Y++D+  EI     N+   +DL VT     + A I+  I K   A  A + +
Sbjct: 298 RIAVLAHVYHLDMIDEILGYAENVPKGYDLIVTTDNADKQALIQQAIAKATNASNAVVLV 357

Query: 173 MENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
           + N GRD    L+      L + YD +C++H K+S + G     G+L++   F +LL  P
Sbjct: 358 VRNDGRDTSALLVGCRDYVLEDRYDLICRVHSKRSPQDGP---RGELFKLHTFENLLHTP 414

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT--FQDQ 289
           G V  ++  F  +  +G++          Y     S   N+  +  LA ++G+     D 
Sbjct: 415 GYVSNLLELFANNPALGLVMPPLVHI--GYPTIGNSWAGNKANVAKLARQLGLIVHLDDS 472

Query: 290 KLDFFAGTMFWVRTEALDPIKNLRLS-RYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
                 G M+W R  AL  +   R +   F    ++  DG + HA+ER  +     A +
Sbjct: 473 TPVAPYGGMYWFRPAALRKLFEERWNWNDFANMDYR--DGSLVHAIERIIAYVAIDAGY 529


>gi|260890973|ref|ZP_05902236.1| conserved hypothetical protein [Leptotrichia hofstadii F0254]
 gi|260859000|gb|EEX73500.1| conserved hypothetical protein [Leptotrichia hofstadii F0254]
          Length = 319

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 12/244 (4%)

Query: 112 IAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKI---FPAA 168
           I +K K+ ++ H+Y+ DL  E  + + ++  + DL +T   +    K E       F   
Sbjct: 2   IYLKYKVLLIFHIYFEDLLDESIHYMKSMPETSDLLITTPRKELKEKIEEKVRGLNFRNI 61

Query: 169 RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR-KGYSWWEGDLWRRWLFYDL 227
            + ++EN GRDV   L+  + + + NYDYVC +H KK+ + K YS  +G  +R   + + 
Sbjct: 62  EVRVIENRGRDVSSLLVGAK-DAVMNYDYVCFMHDKKTAQLKPYSSGQG--FRYKCYENN 118

Query: 228 LGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY----CDYTCSLGKNREMICTLAGRMG 283
           L     V  +I TF  +  +GM+      + N +     +++ +  K  ++I  L   + 
Sbjct: 119 LATKKYVKNLIGTFKENPRLGMLMPPPPNHGNFFHIIGNEWSSNFKKTEKLIKKLGLNVD 178

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
             +  + +    GTMFW R  AL  + +        P+     DG I HAVER +  +V+
Sbjct: 179 FHWNLEPISPL-GTMFWFRPRALKKLFDYGWEYSDFPEEPNEHDGTILHAVERVYGFAVQ 237

Query: 344 KANF 347
            A +
Sbjct: 238 DAGY 241


>gi|13476281|ref|NP_107851.1| hypothetical protein mlr7560 [Mesorhizobium loti MAFF303099]
 gi|14027042|dbj|BAB53996.1| mlr7560 [Mesorhizobium loti MAFF303099]
          Length = 637

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 40/261 (15%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEI---LKIFPAAR--- 169
            KIA+  H+YY D+  EI  L  N+ + +D   T  T++   K+EI   L   P  +   
Sbjct: 297 GKIAVCAHIYYTDMLEEILALTGNIPVPYDFIAT--TDTPDKKAEIEATLAKRPGVKNVI 354

Query: 170 IHIME-NHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDL 227
           + ++E N GRD+    I L    + + YD VC++H KKS +   S    +L++R +  +L
Sbjct: 355 VRVVEKNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQAS--RSNLFKRHMLENL 412

Query: 228 LGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK----NREMICTLAGRMG 283
           L   G V  ++  F  +  +G+        P  +  Y  ++G     NR  +   A  + 
Sbjct: 413 LNTRGYVHNVLDMFHDNPSVGLAVP-----PVVHISYP-TMGHAWFFNRPKVEETARLLN 466

Query: 284 ITFQ-DQKLDFFA-GTMFWVRTEALDPIKNLRLSRYFEPK--------VHKALDGEIEHA 333
           I  + D      A GTMFW R  A        L + FE K            +DG + H 
Sbjct: 467 IKVKFDHDTPVAAYGTMFWFRPRA--------LRKMFEHKWKWEDFNAEPNHVDGGLAHV 518

Query: 334 VERCFSLSVKKANFRISDVDC 354
           +ER  + + + A +    + C
Sbjct: 519 LERLIAYAAQDAGYTTRHIMC 539


>gi|33862360|ref|NP_893920.1| glycosyltransferase [Prochlorococcus marinus str. MIT 9313]
 gi|33640473|emb|CAE20262.1| glycosyltransferase [Prochlorococcus marinus str. MIT 9313]
          Length = 738

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 32/262 (12%)

Query: 101 WESPAM---GKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL---------HV 148
           W  P +     + Q   +  IA+ VH++Y +L   I N L+   I  DL         H 
Sbjct: 482 WNVPMITPASSLQQQDSETTIALHVHVHYPELLDTILNALNYNKIRPDLFLSCTNHENHS 541

Query: 149 TLVTESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
            +  +SA     +  I          N GRD+ P L  +  E  + Y+    +H KKS  
Sbjct: 542 EIQCKSAGANCTLKSII------TTPNRGRDIGPLLTEIGKELDTKYEIYGHLHTKKSAL 595

Query: 209 KGYSWWEGDLWRRWLFYDLLGAPGVVF--KIIRTFDTHRDIGMIGSRAYRYPNKYCDYTC 266
                 +G  WR +L  +L+G   +    +I+     +  +G++ +          D TC
Sbjct: 596 --LPGKQGCSWRDFLISNLVGMQDIAMADRIVTALKKNPKLGLVFAD---------DPTC 644

Query: 267 -SLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKA 325
                NR+    LA ++ +    +  DF  GTMFW +  AL  + NL L     P+    
Sbjct: 645 VGWSGNRKHADILANKLNLGPLPRCFDFPVGTMFWAKKGALTELYNLNLGWEDYPQEPLG 704

Query: 326 LDGEIEHAVERCFSLSVKKANF 347
            DG I HA+ER   +   K  F
Sbjct: 705 YDGTILHAIERLLPIIAAKQGF 726


>gi|227546966|ref|ZP_03977015.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212567|gb|EEI80455.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 631

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 9/236 (3%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES-ASIKSEILKIFPAA-RIHIME 174
           KIA+ +H+YY+DL     + + ++    D+ +T+ +E+ A    E  K FP    + ++E
Sbjct: 310 KIALAIHVYYMDLLESTFHYIQSMPEGCDIIITVGSEANAETVREYCKQFPYNFDVRVIE 369

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVV 234
           N GRDV   L+    E L  YDYVC  H KK  +       GD +    F ++L +   V
Sbjct: 370 NRGRDVSALLVGC-GEDLFQYDYVCFAHDKKVTQLSPQSI-GDGFAYKCFENILASKEYV 427

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN----REMICTLAGRMGITFQDQK 290
             +I  F+ +  +G+       + + +  YT   G N    ++ +            D++
Sbjct: 428 SNVIDLFERNPRLGIAMPTPPNHASYFPGYTFPWGPNFPGTKDFLEQTLNMHVPLNADKE 487

Query: 291 LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
                GTMFW R EA   + +        P     +DG + H +ER +   V +AN
Sbjct: 488 PVAPMGTMFWFRPEAFRGLLDHGWEYTDFPPEPNKVDGTLLHFIERAYGY-VPQAN 542


>gi|262038042|ref|ZP_06011449.1| lipopolysaccharide biosynthesis protein [Leptotrichia goodfellowii
           F0264]
 gi|261747934|gb|EEY35366.1| lipopolysaccharide biosynthesis protein [Leptotrichia goodfellowii
           F0264]
          Length = 629

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 27/259 (10%)

Query: 111 QIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAAR- 169
           +I    K+ +  H+Y+ DL  E      N+    D+ +T  T+    K +I KIF   + 
Sbjct: 298 KIENSPKVGLFFHIYFEDLIEECYRYALNMPEYADIFIT--TDKEEKKEKIEKIFSKMKN 355

Query: 170 ---IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYD 226
              I +++N GRDV  FLI    E++  YDY C  H KK+K+      +G+ ++   F +
Sbjct: 356 KIDIKVIQNRGRDVSAFLIP-NKEEILKYDYACFAHDKKTKQLQ-PEIKGEDFKFRCFEN 413

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK--------NREMICTL 278
           +LG+  +V  II  F  +  +G++   +   PN + ++  +LG+        N E  C L
Sbjct: 414 ILGSKELVENIIGLFIENPRLGLLSPPS---PN-HAEFYGNLGREWGHSGNDNYEETCNL 469

Query: 279 AGRMGITFQ-DQKLDFFA--GTMFWVRTEALDPIKNLRLSRYFE--PKVHKALDGEIEHA 333
              + I    D      A  GT+FW R ++L+ +  L+    +E  PK    +DG + HA
Sbjct: 470 LKELVIEVNVDISKAPVAPYGTIFWFRPKSLEKL--LKKGWKYEDFPKEPNKVDGTLLHA 527

Query: 334 VERCFSLSVKKANFRISDV 352
           +ER +   V+ A +  +++
Sbjct: 528 IERVYPFVVQGAGYYSANI 546


>gi|261367011|ref|ZP_05979894.1| putative polysaccharide biosynthesis protein [Subdoligranulum
           variabile DSM 15176]
 gi|282571129|gb|EFB76664.1| putative polysaccharide biosynthesis protein [Subdoligranulum
           variabile DSM 15176]
          Length = 646

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 23/254 (9%)

Query: 108 KVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA 167
           +  ++  + +IA+ +HLY++D+  +     +      D+ V+  T S   K +I + F  
Sbjct: 300 QAEELCAQRRIALAMHLYFMDMLEQSVAFAAKFPPQTDVFVS--TNSEEKKEQIEQAFSG 357

Query: 168 ARIH-----IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRW 222
            ++H     ++EN GRDV  FL  L    L NYDY C +H KK+ +       G +   +
Sbjct: 358 QKLHSVTVMVVENRGRDVGAFLCDL-APHLRNYDYACFMHDKKAIQTK----PGSVGASF 412

Query: 223 LFY---DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG------KNRE 273
            +    ++      V  ++  F+    +G++    Y     Y    CS G        ++
Sbjct: 413 GYVCNENVCKNAAHVLNVLCEFENDPYLGILCP-PYPTHGLYFMNMCSGGWGPNFENTKK 471

Query: 274 MICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
           ++  L   + I+ ++  +  F G++FW R +AL+P+          P+     DG I HA
Sbjct: 472 LLKELGLDVPISGEESPIAPF-GSVFWFRPKALEPLFAHGWQHTDFPQEPLPQDGTISHA 530

Query: 334 VERCFSLSVKKANF 347
           +ER +    + A +
Sbjct: 531 IERVYPFVAQAAGY 544


>gi|241668058|ref|ZP_04755636.1| glycosyl transferase, group 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 756

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 15/239 (6%)

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHI 172
           I  K AI +HL+YIDL  E       L   +DL++T++ + ++    E      AA + I
Sbjct: 518 ISHKFAIHLHLFYIDLADEFNEYFKLLPKGYDLYITIIDSNNSEFIKEKFSSSGAANVEI 577

Query: 173 --MENHGRDVLPFLILLETEQLS-NYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
             ++N GRD+ P +  L+ + L+  Y+ V   H KK+     +   GD WR +L  +L+G
Sbjct: 578 VAVDNIGRDIAPMIFGLKDQLLNRGYEIVGHFHSKKTVSAHDNL--GDKWRAYLLNNLIG 635

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ 289
               +   I        IG++      Y          +G+N+  +  L   +G+    +
Sbjct: 636 DNEQISNSILNLFNDEKIGLVFPEDRTY--------IDIGENKFYVDELCTAIGLEKICE 687

Query: 290 KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
              F  G MFW R +A+  I +L      + +     DG   HA+ER     V+K  ++
Sbjct: 688 TPLFPLGNMFWARVDAIRDIFSLNEDMILQEE-PLPRDGSYMHALERIIPNIVEKNGYK 745


>gi|167627488|ref|YP_001677988.1| group 1 glycosyl transferase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597489|gb|ABZ87487.1| glycosyl transferase, group 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 763

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 15/239 (6%)

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHI 172
           I  K AI +HL+YIDL  E       L   +DL++T++ + ++    E      AA + I
Sbjct: 525 ISHKFAIHLHLFYIDLADEFNEYFKLLPKGYDLYITIIDSNNSEFIKEKFSSSGAANVEI 584

Query: 173 --MENHGRDVLPFLILLETEQLS-NYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
             ++N GRD+ P +  L+ + L+  Y+ V   H KK+     +   GD WR +L  +L+G
Sbjct: 585 VAVDNIGRDIAPMIFGLKDQLLNRGYEIVGHFHSKKTVSAHDNL--GDKWRAYLLNNLIG 642

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ 289
               +   I        IG++      Y          +G+N+  +  L   +G+    +
Sbjct: 643 DNEQISNSILNLFNDEKIGLVFPEDRTY--------IDIGENKFYVDELCTAIGLEKICE 694

Query: 290 KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
              F  G MFW R +A+  I +L      + +     DG   HA+ER     V+K  ++
Sbjct: 695 TPLFPLGNMFWARVDAIRDIFSLNEDMILQEEPLPR-DGSYMHALERIIPNIVEKNGYK 752


>gi|254876593|ref|ZP_05249303.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842614|gb|EET21028.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 765

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 15/239 (6%)

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHI 172
           I  K AI +HL+YIDL  E       L   +DL++T++ + ++    E      AA + I
Sbjct: 527 ISHKFAIHLHLFYIDLADEFNEYFKLLPKGYDLYITIIDSNNSEFIKEKFSSSGAANVEI 586

Query: 173 --MENHGRDVLPFLILLETEQLS-NYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
             ++N GRD+ P +  L+ + L+  Y+ V   H KK+     +   GD WR +L  +L+G
Sbjct: 587 VAVDNIGRDIAPMIFGLKDQLLNRGYEIVGHFHSKKTVSAHDNL--GDKWRAYLLNNLIG 644

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ 289
               +   I        IG++      Y          +G+N+  +  L   +G+    +
Sbjct: 645 DNEQISNSILNLFNDEKIGLVFPEDRTY--------IDIGENKFYVDELCTAIGLEKICE 696

Query: 290 KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
              F  G MFW R +A+  I +L      + +     DG   HA+ER     V+K  ++
Sbjct: 697 TPLFPLGNMFWARVDAIRDIFSLNEDMILQEE-PLPRDGSYMHALERIIPNIVEKNGYK 754


>gi|116071143|ref|ZP_01468412.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           BL107]
 gi|116066548|gb|EAU72305.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           BL107]
          Length = 1161

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 40/259 (15%)

Query: 103 SPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEIL 162
           SP   K+ Q   + K  + +H++Y +L   IA+ L+ + +  D++++   +      E+ 
Sbjct: 188 SPHPQKLTQAIEQKKFGVFLHIFYPELAKTIADYLAKIPVKIDIYISTTEKEV---DELA 244

Query: 163 KIF------PAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGY--SWW 214
           K F         ++    N GRDV PF++    E++  YD++ K+H KKS        W+
Sbjct: 245 KTFRRLDNSEHVQVKSFSNTGRDVAPFVVGFR-EEILKYDFILKLHSKKSPHSDALSGWF 303

Query: 215 EGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----- 269
           E  L       +L+G+  V +  I          M    A  YP +  +Y  SLG     
Sbjct: 304 EHCL------DNLIGSKDVFYTNIFEL-------MNNETAIIYPVE--NYALSLGIKHDS 348

Query: 270 ------KNREMICTLAGRMGITF--QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPK 321
                  N +    L  ++ +    +D K  F  GTMFW ++  L PI +  L  +    
Sbjct: 349 CWGHEDGNYDKAKPLLDKLNLKHIDRDSKFLFPTGTMFWCKSYILQPILDWNLGFHDFDN 408

Query: 322 VHKALDGEIEHAVERCFSL 340
               +DG + H++ER   L
Sbjct: 409 EGGQIDGTLAHSIERLIGL 427


>gi|311063512|ref|YP_003970237.1| lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           PRL2010]
 gi|310865831|gb|ADP35200.1| lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           PRL2010]
          Length = 631

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 9/236 (3%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES-ASIKSEILKIFPAA-RIHIME 174
           KIA+ +H+YY+DL       + ++    D+ +T+ +E+ A I  E  K FP    + ++E
Sbjct: 310 KIALAIHVYYMDLLESTFRYIQSMPEGCDIIITVGSEANAEIVREYCKQFPYRFDVRVIE 369

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVV 234
           N GRDV   L+    E L  YDYVC  H KK  +       GD +    + ++L +   V
Sbjct: 370 NRGRDVSSLLVGC-GEDLFQYDYVCFAHDKKVTQLSPQSI-GDGFAYKCYENILASKEYV 427

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN---REMICTLAGRMGITFQDQKL 291
             +I  F+ +  +G+       + + +  YT   G N    +        M +     K 
Sbjct: 428 SNVIDLFEKNPRLGIAMPTPPNHASYFPGYTFPWGPNFPGTKDFLEQTLNMHVPLNANKE 487

Query: 292 DFFA-GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
                GTMFW R EA   + +        P     +DG + H +ER +   V +AN
Sbjct: 488 PVAPMGTMFWFRPEAFRGLLDHGWKYEDFPPEPNKVDGTLLHFIERAYGY-VPQAN 542


>gi|88808074|ref|ZP_01123585.1| Glycosyl transferase, group 1 [Synechococcus sp. WH 7805]
 gi|88788113|gb|EAR19269.1| Glycosyl transferase, group 1 [Synechococcus sp. WH 7805]
          Length = 512

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 33/238 (13%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKI---FPAARIH 171
           KI +V+H YY +    I   L ++   FDL VT+ +  +   +K  + K+        I 
Sbjct: 50  KILVVIHAYYPESLATIFPSLRHMPCHFDLVVTVCSCGDKEVVKEYLEKVDLPIDVLDIK 109

Query: 172 IMENHGRDVLPFLILLETEQLSN--YDYVCKIHGKKS------KRKGYSWWEGDLWRRWL 223
           ++ N GRD+LPF+ +++  +L N  YD+V K+H K+S      K  G  W EG L     
Sbjct: 110 VLTNLGRDLLPFVQVIKGLKLQNKAYDFVLKLHTKRSVASSKGKEFGGKWLEGSL----- 164

Query: 224 FYDLLGAPG----VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLA 279
             +LLG+P     ++ ++++T +      +I    +R+        C    N   I  L 
Sbjct: 165 -SNLLGSPENVKYILLELLQTTNCALVSPLISLDVFRF--------CKWKNNLAPISHLL 215

Query: 280 GRMGITFQDQK-LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
            R G+    +  + F AG+MFWV  +A   I +        P+   + +G   HA ER
Sbjct: 216 DRFGVRESPEDFICFPAGSMFWVDFKAAVLIASCFEESRVPPEPLPS-NGSYLHAFER 272


>gi|125623094|ref|YP_001031577.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase RgpF [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|124491902|emb|CAL96823.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase RgpF [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300069842|gb|ADJ59242.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase RgpF [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 588

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 28/263 (10%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIH---IM 173
           KIAI +H +Y+DL  E  +       ++DL +T  T++     +I+K +P  +I    + 
Sbjct: 299 KIAIHLHAFYLDLIPEYLDYFDKYVQNYDLFIT--TDTKDKYEQIIKSYPLNQIKKVLVT 356

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRDVLP++ +  +E +++YD     H KKSK     W  G+ WRR + Y LL     
Sbjct: 357 GNKGRDVLPWMEI--SELMADYDLCGHFHTKKSKDN--DWIVGESWRRDIEYSLLKPAQA 412

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTC----SLGKNREMI---CTLAGRMGITF 286
           +F   + F+ +  +G++ +    +   +   T      +  + E I          G+  
Sbjct: 413 IF---QEFEKNPKLGLMIADVPSFFEHFYGPTYITERDIWPDMEEIWKKINFENPRGLKQ 469

Query: 287 QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYF--EPKVHKALDGEIEHAVERCFSLS--V 342
           +D  +  + GTM W R +AL+ +  + +      EP  + +    I HA ER    +   
Sbjct: 470 KDSYVMSY-GTMIWYRPQALNNLLKVDIEAAVPEEPLPYNS----ILHAFERLLVYTSWA 524

Query: 343 KKANFRISDVDCILGYRKSLSQN 365
              +FRIS +    G+  + S N
Sbjct: 525 NGYDFRISQIQTNNGFVANFSAN 547


>gi|78213552|ref|YP_382331.1| lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9605]
 gi|78198011|gb|ABB35776.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9605]
          Length = 1162

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 34/249 (13%)

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES-ASIKSEILKIFPAARIHI 172
           I  K+ I +H++Y +L   IA  L N+  S D+ ++   +S A+++    ++    +I +
Sbjct: 201 INKKVGIFLHIFYPELGETIAAYLKNIPCSIDVFISTREDSVAALEKIFARVENTQKIEV 260

Query: 173 --MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGA 230
               N GRDV PF++    +Q+ NYDY+ K+H KKS     +   G  W      +L+G+
Sbjct: 261 RHFSNIGRDVAPFIVGFR-DQILNYDYILKLHSKKSPHS--NALSG--WFLHCLDNLIGS 315

Query: 231 PGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG---------------KNREMI 275
             +    ++   +  ++G++      YP +  +Y  SLG               K R  +
Sbjct: 316 EAITATNLKALQS-PEVGIV------YPIE--NYALSLGIQHDSCWGHEDGNYAKARPFL 366

Query: 276 CTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVE 335
                R     ++ +  F  GTMFW +   L  I +  L+     +    +DG I H++E
Sbjct: 367 NRYNLRQ--IKRESQFQFPTGTMFWCKPAVLQSILDWGLNWNNFDEEGGQIDGTIAHSIE 424

Query: 336 RCFSLSVKK 344
           R   +S  +
Sbjct: 425 RLIGISTTE 433


>gi|146279467|ref|YP_001169625.1| hypothetical protein Rsph17025_3443 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557708|gb|ABP72320.1| hypothetical protein Rsph17025_3443 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 823

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 19/223 (8%)

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARIHIME 174
           A+ VH +Y D     A++ S+ +      + + T++    SEI     A      + ++ 
Sbjct: 591 ALHVHAFYTDDLA--ADVRSHRAFRLARRIVITTDNERKASEIRTRMGAEGLYPEVILVP 648

Query: 175 NHGRDVLPFLILLETEQLSNYDYV-CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           N GRD+LPF+ L      +  D + C +H KKS     S   GD+WR +L   LLG    
Sbjct: 649 NRGRDILPFMQLFLPGGPAGKDEIWCHLHQKKSLATSDS---GDVWRAFLLRILLGDDAG 705

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
           +   +         G +   A      +  Y      +R ++   A R+     D  L F
Sbjct: 706 LSDAV---------GHLRDPAVGLVAPFDPYHVPWDASRALLPRFAPRLPGPLPDNPLLF 756

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
             G MFWVR   +  + +L    Y  P    A DG   H VER
Sbjct: 757 PVGNMFWVRAGVVRAMNDLFGPSYPWPNEPIANDGTEFHLVER 799


>gi|78184217|ref|YP_376652.1| lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9902]
 gi|78168511|gb|ABB25608.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9902]
          Length = 519

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 19/245 (7%)

Query: 118 IAIVVHLYYIDLWIEIANLLSN-----LSISFDLHVTLVTESASIKSEILKI--FPAARI 170
           +A+++H +Y D+  +I   L +     +    DL+V+   +      + L+   F   R+
Sbjct: 268 LALMIHGFYPDVLDDILLKLPSFCAGMVGTQLDLYVSTSMDQIDQVEKKLRDLDFACVRL 327

Query: 171 HIMENHGRDVLPFLI-LLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
             +EN GRDV PFL+ LL     + + +  K+H KKS + G      D W R L   LL 
Sbjct: 328 FGVENRGRDVAPFLLHLLPAVAAAGHHFFVKLHTKKSLQFGIDGL--DKWSRHLIESLLS 385

Query: 230 APGVVFKIIR-TFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD 288
           A G+  + IR  F    D+G +       P        +L KN+  +  L     I  + 
Sbjct: 386 AAGL--EAIRYQFLDDEDLGCLCPSGTLLP-----LAIALFKNKTHLHHLLSHSEINGRW 438

Query: 289 QKLD-FFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
             +  F AG+MF  R EA   + +   S           DG   HA+ER  SL VK++ +
Sbjct: 439 ALMQTFVAGSMFAGRVEAFRSLLDQGFSLDDFELEGGQFDGTFAHALERLISLEVKRSGW 498

Query: 348 RISDV 352
           +I ++
Sbjct: 499 QIKEM 503


>gi|260434430|ref|ZP_05788400.1| glycosyltransferase [Synechococcus sp. WH 8109]
 gi|260412304|gb|EEX05600.1| glycosyltransferase [Synechococcus sp. WH 8109]
          Length = 772

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 23/243 (9%)

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA---SIKSEILKIFPAARI 170
           I  K+ + +H++Y +L  EI   +S   I  +++++   ++    +IK+         +I
Sbjct: 532 IDEKVGLHIHVHYPELLDEILKAISMNKIRPEIYISCTNQAIRDLAIKNINEHGLILKKI 591

Query: 171 HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKS----KRKGYSWWEGDLWRRWLFYD 226
            +  N GRD+ P L  L  E    Y     IH KKS    + + YSW      R +L  +
Sbjct: 592 ILTPNRGRDIGPLLTCLGQELDEKYRIYGHIHTKKSIHIARHQSYSW------RTFLIEN 645

Query: 227 LLGAPG--VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGI 284
           L+G     ++  II      + IG+        P    +Y  +          LA ++ I
Sbjct: 646 LIGNEENHMMDCIISAMIKDKTIGLAFPSDPHCPGWDANYRQA--------KLLAEKLNI 697

Query: 285 TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
                + +F  GTMFW R  AL P+ +L L     P      DG + H++ER      + 
Sbjct: 698 KSLTNEFNFPIGTMFWARKNALSPLYSLNLGWDDYPSEPIGYDGTLLHSIERLIPFVAES 757

Query: 345 ANF 347
             F
Sbjct: 758 QGF 760


>gi|301632931|ref|XP_002945533.1| PREDICTED: o-antigen export system ATP-binding protein rfbB-like,
           partial [Xenopus (Silurana) tropicalis]
          Length = 367

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 30/161 (18%)

Query: 192 LSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIG 251
           +  Y  + ++H K+S         G+ WR  L+  L G+   V  I+ TF+TH  +GM+ 
Sbjct: 201 IPRYALILRLHSKRSLH--IPGQVGEEWRALLYTSLAGSRQRVNAIVDTFNTHPKLGMLC 258

Query: 252 SRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF-QDQKLDFFAGTMFWVRTEALD--- 307
                  + Y D     G N + +C L    GIT   DQ +DF  G+MFW R +AL    
Sbjct: 259 PAVI---DHYAD-CLHFGGNYKRMCALLQPHGITLPPDQPIDFPMGSMFWCRPQALSVWL 314

Query: 308 ----------PIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
                     P  +L   R          DG + HA+ER F
Sbjct: 315 EPGFTFDDFTPTNDLDTDR----------DGTLAHALERLF 345


>gi|297182567|gb|ADI18727.1| lipopolysaccharide biosynthesis protein [uncultured Rhizobiales
           bacterium HF4000_32B18]
          Length = 887

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 25/191 (13%)

Query: 167 AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYD 226
           A    ++ N GRDVLPFL L +  +  N  + C +H KKS   G +   G +WR +L   
Sbjct: 697 AIETRVVANRGRDVLPFLELFDGSEDDNALW-CHVHLKKSVGLGPTS-PGAVWRAFLMRI 754

Query: 227 LLGAP---GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
           LLG P        +IR  +     G++G+        +  Y      +R ++  L  R+ 
Sbjct: 755 LLGGPERLSTALALIRAPEA----GLVGA--------FDPYVMGWTGSRRLLAPLQARLD 802

Query: 284 --------ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVE 335
                       D  L F  G MFWV+   ++ ++ L  + Y  P      DG + H +E
Sbjct: 803 GWEADGGRRPLPDHPLLFPVGDMFWVKAGVVNAMRRLFGADYPWPGEPLPGDGTVYHLIE 862

Query: 336 RCFSLSVKKAN 346
           R +  +   A 
Sbjct: 863 RLWPTAAALAG 873


>gi|260890969|ref|ZP_05902232.1| O-antigen export system ATP-binding protein RfbB [Leptotrichia
           hofstadii F0254]
 gi|260859295|gb|EEX73795.1| O-antigen export system ATP-binding protein RfbB [Leptotrichia
           hofstadii F0254]
          Length = 709

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 12/239 (5%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILK---IFPAARIHIM 173
           K+ ++ H+Y+ DL  E  + + ++  + DL +T   +    K E       F    + ++
Sbjct: 152 KVLLIFHIYFEDLLDESIHYMKSMPETSDLLITTPRKELKEKIEEKVRGLNFRNIEVRVI 211

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR-KGYSWWEGDLWRRWLFYDLLGAPG 232
           EN GRDV   L+  + + + NYDYVC +H KK+ + K YS    D++  +     L    
Sbjct: 212 ENRGRDVSSLLVGAK-DAVMNYDYVCFMHDKKTAQLKPYSSL-NDVYINYC-KGTLATKK 268

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKY----CDYTCSLGKNREMICTLAGRMGITFQD 288
            V  +I TF  +  +GM+      + N +     +++ +  K  ++I  L   +   +  
Sbjct: 269 YVKNLIGTFKENPRLGMLMPPPPNHGNFFHIIGNEWSSNFKKTEKLIKKLGLNVDFHWNL 328

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
           + +    GTMFW R  AL  + +        P+     DG I HAVER +   V+ A +
Sbjct: 329 EPISPL-GTMFWFRPRALKKLFDYGWEYSDFPEEPNEHDGTILHAVERVYGFVVQDAGY 386


>gi|160936497|ref|ZP_02083865.1| hypothetical protein CLOBOL_01388 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440582|gb|EDP18320.1| hypothetical protein CLOBOL_01388 [Clostridium bolteae ATCC
           BAA-613]
          Length = 373

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 18/219 (8%)

Query: 122 VHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVL 181
           +++  I  +I++  + SN  I+F +    +  +  I  ++L         + EN GRD+ 
Sbjct: 12  LYIEQIPKYIDVCFVTSNPKIAFKVK-KYINNTKKINYKVL---------VKENRGRDMA 61

Query: 182 PFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTF 241
             L+    + +  Y+Y+C +H KKS + G    +G  +   ++ +L+G+ G++  I+R  
Sbjct: 62  ALLVTCH-DFIMEYEYLCFVHDKKSLQMGNDN-DGCKFMELIWKNLIGSTGLIENILRYL 119

Query: 242 DTHRDIG-MIGSRAY--RYPNKYCD-YTCSLGKNREMICTLAGRMGITFQDQKLDFFAGT 297
             +RD+G M+    Y   Y   + + +TC+      +   L  +  + ++ + +    G 
Sbjct: 120 GNNRDVGLMVPPIPYWGNYIGVFINPWTCNYDNVINLGNQLKLKKNVCYEKEYVTI--GG 177

Query: 298 MFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
            FW RT AL P+   +       +   A+DG I HA+ER
Sbjct: 178 AFWCRTNALKPLFEYKWKLEDFCQEPMAVDGTISHAIER 216


>gi|332561589|ref|ZP_08415902.1| glycosyltransferase [Rhodobacter sphaeroides WS8N]
 gi|332274091|gb|EGJ19409.1| glycosyltransferase [Rhodobacter sphaeroides WS8N]
          Length = 821

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIME 174
           + ++ VH +Y D   +     +    +  + VT  ++  +  I++ +  +  A  + +  
Sbjct: 587 RFSLHVHAFYTDDLAQDVRRHAAYRCASRIVVTTDSDRKADEIRTLMAAVGLAPEVLVRP 646

Query: 175 NHGRDVLPFLILLETEQLSNYDYV-CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           N GRD+LPFL L      +  D + C +H KKS     S   GD+WR +L   LLG    
Sbjct: 647 NRGRDILPFLQLFLPGGAAGEDEIWCHLHQKKSLATTDS---GDMWRAFLLRILLGDEAS 703

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
           +     T   +  +G++          +  Y      +R ++  +A R+     D  L F
Sbjct: 704 LSDAA-THLRNPGVGLVA--------PFDPYFIPWDASRALLPRVAPRLPGPLPDNPLLF 754

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
             G MF+VR+  +  + +L  + Y  P      DG   H +ER
Sbjct: 755 PVGNMFFVRSAVVRAMNDLFGAGYPWPNEPIPNDGTEFHLIER 797


>gi|221218294|ref|YP_002524321.1| glycosyltransferase [Rhodobacter sphaeroides KD131]
 gi|221163321|gb|ACM04287.1| glycosyltransferase [Rhodobacter sphaeroides KD131]
          Length = 821

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIME 174
           + ++ VH +Y D   +     +    +  + VT  ++  +  I++ +  +  A  + +  
Sbjct: 587 RFSLHVHAFYTDDLAQDVRRHAAYRCASRIVVTTDSDRKADEIRTLMAAVGLAPEVLVRP 646

Query: 175 NHGRDVLPFLILLETEQLSNYDYV-CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           N GRD+LPFL L      +  D + C +H KKS     S   GD+WR +L   LLG    
Sbjct: 647 NRGRDILPFLQLFLPGGAAGEDEIWCHLHQKKSLATTDS---GDIWRAFLLRILLGDEAS 703

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
           +     T   +  +G++          +  Y      +R ++  +A R+     D  L F
Sbjct: 704 LSDAA-THLRNPGVGLVA--------PFDPYFIPWDASRALLPRVAPRLPGPLPDNPLLF 754

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
             G MF+VR+  +  + +L  + Y  P      DG   H +ER
Sbjct: 755 PVGNMFFVRSRVVRAMNDLFGAGYPWPNEPIPNDGTEFHLIER 797


>gi|14090418|gb|AAK53494.1| putative methyltransferase [Xanthomonas campestris pv. campestris]
          Length = 212

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 19/159 (11%)

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENHGR 178
           +V+H +Y+D+  E+ + +        + +T  +T+   +   I +    A +   EN GR
Sbjct: 51  VVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRRGIQAEVEGFENRGR 110

Query: 179 DVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKII 238
           D+LPFL +       N   V K+H KKS  +     +G+ WR  +   LLG P  V  I+
Sbjct: 111 DILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEMLTALLG-PQRVDAIV 165

Query: 239 RTFDTHRDIGM-------------IGSRAYRYPNKYCDY 264
             F T   +G+             IG  A R    YC +
Sbjct: 166 NAFSTDPLVGLAAPEDHLLPVTEFIGGNAERTGLSYCSH 204


>gi|189440434|ref|YP_001955515.1| lipopolysaccharide biosynthesis protein [Bifidobacterium longum
           DJO10A]
 gi|317482688|ref|ZP_07941702.1| rhamnan synthesis protein F [Bifidobacterium sp. 12_1_47BFAA]
 gi|189428869|gb|ACD99017.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium longum
           DJO10A]
 gi|316915934|gb|EFV37342.1| rhamnan synthesis protein F [Bifidobacterium sp. 12_1_47BFAA]
          Length = 666

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 102/248 (41%), Gaps = 15/248 (6%)

Query: 104 PAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILK 163
           P+     Q   + + A + H+Y++DL  +  + +++L    DL++T   +      E ++
Sbjct: 291 PSQAINPQTHDRPRSAFIYHVYFMDLLEDTCHYIASLPEETDLYITSTEDKIPQIREYMQ 350

Query: 164 ---IFPAARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYSWWEG 216
              I   A    + N GRDV   L+      LS  YD +   H KKS   +  G+   E 
Sbjct: 351 QHGISHQATFIPVINRGRDVSALLVAACPVVLSGKYDVIGFAHDKKSSQNQENGHHGTES 410

Query: 217 DLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCS--LGKNREM 274
             +   L  + LG+   V  I+  F  +  +G + +    Y   Y  +T     G N E+
Sbjct: 411 QGFAYKLMENTLGSEAYVKNILTLFAENPRLGQV-TPPPPYHALYFAHTIPHDWGANYEI 469

Query: 275 ICT-LAGRMGITFQDQKLDFFA---GTMFWVRTEALDPIKNLRLS-RYFEPKVHKALDGE 329
               L  R+GI          A   G+ +W R EAL P+         F P+     DG 
Sbjct: 470 TKELLEDRLGIHVPLSPTKPTASAMGSCYWFRVEALKPLFEYGWKYEDFLPEGQMGEDGT 529

Query: 330 IEHAVERC 337
           I HA+ER 
Sbjct: 530 ISHAIERA 537


>gi|322690050|ref|YP_004209784.1| hypothetical protein BLIF_1872 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320461386|dbj|BAJ72006.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 672

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 102/248 (41%), Gaps = 15/248 (6%)

Query: 104 PAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILK 163
           P+     Q   + + A + H+Y++DL  +  + +++L    DL++T   +      E ++
Sbjct: 291 PSQAINPQTHDRPRSAFIYHVYFMDLLEDTCHYIASLPEETDLYITSTEDKIPQIREYMQ 350

Query: 164 ---IFPAARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYSWWEG 216
              I   A    + N GRDV   L+      LS  YD +   H KKS   +  G+   E 
Sbjct: 351 QHGISHQATFIPVINRGRDVSALLVAACPVVLSGKYDVIGFAHDKKSSQNQENGHHGTES 410

Query: 217 DLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCS--LGKNREM 274
             +   L  + LG+   V  I+  F  +  +G + +    Y   Y  +T     G N E+
Sbjct: 411 QGFAYKLMENTLGSEAYVKNILTLFAENPRLGQV-TPPPPYHALYFAHTIPHDWGANYEI 469

Query: 275 ICT-LAGRMGITFQDQKLDFFA---GTMFWVRTEALDPIKNLRLS-RYFEPKVHKALDGE 329
               L  R+GI          A   G+ +W R EAL P+         F P+     DG 
Sbjct: 470 TKELLEDRLGIHVPLSPTKPTASAMGSCYWFRVEALKPLFEYGWKYEDFLPEGQMGEDGT 529

Query: 330 IEHAVERC 337
           I HA+ER 
Sbjct: 530 ISHAIERA 537


>gi|291516581|emb|CBK70197.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium longum
           subsp. longum F8]
          Length = 688

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 102/248 (41%), Gaps = 15/248 (6%)

Query: 104 PAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILK 163
           P+     Q   + + A + H+Y++DL  +  + +++L    DL++T   +      E ++
Sbjct: 313 PSQAINPQTHDRPRSAFIYHVYFMDLLEDTCHYIASLPEETDLYITSTEDKIPQIREYMQ 372

Query: 164 ---IFPAARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYSWWEG 216
              I   A    + N GRDV   L+      LS  YD +   H KKS   +  G+   E 
Sbjct: 373 QHGISHQATFIPVINRGRDVSALLVAACPVVLSGKYDVIGFAHDKKSSQNQENGHHGTES 432

Query: 217 DLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCS--LGKNREM 274
             +   L  + LG+   V  I+  F  +  +G + +    Y   Y  +T     G N E+
Sbjct: 433 QGFAYKLMENTLGSEAYVKNILTLFAENPRLGQV-TPPPPYHALYFAHTIPHDWGANYEI 491

Query: 275 ICT-LAGRMGITFQDQKLDFFA---GTMFWVRTEALDPIKNLRLS-RYFEPKVHKALDGE 329
               L  R+GI          A   G+ +W R EAL P+         F P+     DG 
Sbjct: 492 TKELLEDRLGIHVPLSPTKPTASAMGSCYWFRVEALKPLFEYGWKYEDFLPEGQMGEDGT 551

Query: 330 IEHAVERC 337
           I HA+ER 
Sbjct: 552 ISHAIERA 559


>gi|50982351|gb|AAT91804.1| hypothetical protein [Yersinia enterocolitica]
          Length = 358

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 32/230 (13%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARI--HIME 174
           K  I+VH +Y     EI N L   +   D  + + +   +I  +  +I    R+   IM 
Sbjct: 128 KKLIIVHAFYQREAEEIFNRLVAFT---DYDIVITSPYNNIICKAKEILGQERVIGFIMP 184

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKKSK--RKGYSWWEGDLWRRWLFYDLLGAPG 232
           N+GRD+LPFLI L+   +  Y+Y  K+H K+S+      +W+  +L       D L    
Sbjct: 185 NYGRDILPFLICLQLIVIEKYEYFVKVHTKRSQHLNDNGAWFNNNL-------DYLVG-- 235

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCS----LGKNREMICTLAGRMGITFQD 288
                    + +   G+    +   P  Y +Y       +  N   +  L  +   + + 
Sbjct: 236 ---------NKNATDGLFSIMSDDEPQIYGEYILPIQDHIANNIHWLTYLLEKEPASVE- 285

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
               F  GTMF      L  I++L+L  +   K +  LDG   HA+ER F
Sbjct: 286 --ASFIPGTMFIGNRAFLVLIRDLQLHLFQIEKENGQLDGCCVHAIERYF 333


>gi|77404644|ref|YP_345218.1| glycosyltransferase [Rhodobacter sphaeroides 2.4.1]
 gi|77390294|gb|ABA81477.1| possible glycosyltransferase [Rhodobacter sphaeroides 2.4.1]
          Length = 793

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 15/207 (7%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIME 174
           + ++ VH +Y D   +     +    +  + VT  ++  +  I++ +  +  A  + +  
Sbjct: 587 RFSLHVHAFYTDDLAQDVRRHAAYRCASRIVVTTDSDRKADEIRTLMAAVGLAPEVLVRP 646

Query: 175 NHGRDVLPFLILLETEQLSNYDYV-CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           N GRD+LPFL L      +  D + C +H KKS     S   GD+WR +L   LLG    
Sbjct: 647 NRGRDILPFLQLFLPGGAAGEDEIWCHLHQKKSLATTDS---GDIWRAFLLRILLGDEAS 703

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
           +         +  +G++          +  Y      +R ++  +A R+     D  L F
Sbjct: 704 LSDAATNL-RNPGVGLVA--------PFDPYFIPWDASRALLPRVAPRLPGPLPDNPLLF 754

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEP 320
             G MF+VR+  +  + +L  + Y  P
Sbjct: 755 PVGNMFFVRSAVVRAMNDLFGAGYPGP 781


>gi|219670466|ref|YP_002460901.1| Rhamnan synthesis F [Desulfitobacterium hafniense DCB-2]
 gi|219540726|gb|ACL22465.1| Rhamnan synthesis F [Desulfitobacterium hafniense DCB-2]
          Length = 606

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 12/252 (4%)

Query: 104 PAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEIL 162
           P+   V  +  + K+ +  H+YY DL     + + ++    D+ +T    E   I  E +
Sbjct: 279 PSDYVVKPLKRQPKVVVCFHVYYEDLLDSCFHYMQSIPQFADIVITTPKKELVGIIEEKI 338

Query: 163 KIFP--AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSK--RKGYSWWEGDL 218
           K +      I ++   GR    FL+  + + + +YDY C +H KKS   R G    E  L
Sbjct: 339 KSYELNNTTIKVINARGRAESAFLVATK-DFILDYDYACIVHDKKSSFLRPGCVGVEFGL 397

Query: 219 WRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTL 278
                   LL     V  I+  F+ +  IG +      + N    Y    G N +     
Sbjct: 398 QN---LDALLATSAYVENILSIFEDNPRIGALEPVHLLHANFRDLYGGEWGANYKGTEEF 454

Query: 279 AGRMGITF---QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVE 335
             R GI      D       G MFW R   +  I ++       P+    LDG + H +E
Sbjct: 455 LKRAGIDLLISPDVPPLAPMGAMFWFRPICMKRILDMEWEYEDFPEEPLPLDGSLIHIIE 514

Query: 336 RCFSLSVKKANF 347
           R +   V+ A +
Sbjct: 515 RAYPFIVQDAGY 526


>gi|291520449|emb|CBK75670.1| Lipopolysaccharide biosynthesis protein [Butyrivibrio fibrisolvens
           16/4]
          Length = 486

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 29/186 (15%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKI-----FPAARIH 171
           K+A+V HLYY++++    + L+ +    D+ +T  T S   K  I+++          + 
Sbjct: 291 KVAVVAHLYYVEMFELCMDYLAKVPYGIDIIIT--TNSDDKKQNIIEVASEKGVKLTEVI 348

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
           + EN GR++   L+    + L  Y Y C +H KKS  K +    G  +R  L+   L + 
Sbjct: 349 VAENRGRELAALLVGC-GKFLLKYKYFCFVHDKKSSAKEH-LSVGLAFRDILWDSSLYSE 406

Query: 232 GVVFKIIRTFDTHRDIGM-------IGSRAYRYPN-------------KYCDYTCSLGKN 271
           G +  II  F+ +  +G+        GS  Y +P+             K  +    + ++
Sbjct: 407 GYIRNIIDMFEQNECMGLAVPPTVYCGSYFYPFPDYWVGNYEKTIELSKILNINVDIAED 466

Query: 272 REMICT 277
           R + CT
Sbjct: 467 RPIPCT 472


>gi|310286583|ref|YP_003937841.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           S17]
 gi|309250519|gb|ADO52267.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           S17]
          Length = 662

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 98/254 (38%), Gaps = 27/254 (10%)

Query: 104 PAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILK 163
           P + +  +     + A + H+Y++DL  +    +S L    DL++T   +      + + 
Sbjct: 292 PTVTRNPRTGADVRSAFIYHIYFLDLLGDTCRYISALPEETDLYITTTEDKIDAIRDYMA 351

Query: 164 I----FPAARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYSWWE 215
                 P   I ++ N GRDV   L+      LS  YD +   H KKS   +  G+   E
Sbjct: 352 SHGVNHPVTFISVV-NRGRDVSALLVAACDVVLSGKYDVIGFAHDKKSSQNQENGHHGTE 410

Query: 216 GDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSR--------AYRYPNKYCDYTCS 267
              +   L  + L +   V  I+  F     +G +           A+  P+   D+  +
Sbjct: 411 SQGFAYKLMENTLASRDYVENILTLFSNEPRLGQVAPPPPFHALYFAHTLPH---DWGAN 467

Query: 268 LGKNREMICTLAGRMGI--TFQDQKLDFFA-GTMFWVRTEALDPIKNLRLS-RYFEPKVH 323
               +E+   L  R  I       K    A G+ +W R EAL P+         F P+  
Sbjct: 468 FEITKEL---LEDRFDIHVPLSPGKPSASAIGSCYWFRVEALKPLFEYGWKYEDFLPEGE 524

Query: 324 KALDGEIEHAVERC 337
              DG + HA+ER 
Sbjct: 525 MGEDGTVSHAIERA 538


>gi|224284010|ref|ZP_03647332.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           NCIMB 41171]
 gi|313141164|ref|ZP_07803357.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313133674|gb|EFR51291.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 662

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 98/254 (38%), Gaps = 27/254 (10%)

Query: 104 PAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILK 163
           P + +  +     + A + H+Y++DL  +    +S L    DL++T   +      + + 
Sbjct: 292 PTVTRNPRTGADVRSAFIYHIYFLDLLGDTCRYISALPEETDLYITTTEDKIDAIRDYMA 351

Query: 164 I----FPAARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYSWWE 215
                 P   I ++ N GRDV   L+      LS  YD +   H KKS   +  G+   E
Sbjct: 352 SHGVNHPVTFISVV-NRGRDVSALLVAACDVVLSGKYDVIGFAHDKKSSQNQENGHHGTE 410

Query: 216 GDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSR--------AYRYPNKYCDYTCS 267
              +   L  + L +   V  I+  F     +G +           A+  P+   D+  +
Sbjct: 411 SQGFAYKLMENTLASRDYVENILTLFSNEPRLGQVAPPPPFHALYFAHTLPH---DWGAN 467

Query: 268 LGKNREMICTLAGRMGI--TFQDQKLDFFA-GTMFWVRTEALDPIKNLRLS-RYFEPKVH 323
               +E+   L  R  I       K    A G+ +W R EAL P+         F P+  
Sbjct: 468 FEITKEL---LEDRFDIHVPLSPGKPSASAIGSCYWFRVEALKPLFEYGWKYEDFLPEGE 524

Query: 324 KALDGEIEHAVERC 337
              DG + HA+ER 
Sbjct: 525 MGEDGTVSHAIERA 538


>gi|291520445|emb|CBK75666.1| Lipopolysaccharide biosynthesis protein [Butyrivibrio fibrisolvens
           16/4]
          Length = 109

 Score = 42.0 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESAS--IKSEILKIFPAARIHIM- 173
           + A+  +L++ DL+ E     SNL    D++V   TE     I   I K+     + ++ 
Sbjct: 15  RYAVFAYLFFDDLFEESLRYFSNLPNYVDIYVATNTEEKVDVINGYIPKMLFRHNVKVLL 74

Query: 174 -ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
             N GRDV   L+LL+    SNYD +C +H K   R
Sbjct: 75  HNNKGRDVSALLVLLK-RYYSNYDVICFVHDKNHLR 109


>gi|148238469|ref|YP_001223856.1| sulfotransferase [Synechococcus sp. WH 7803]
 gi|147847008|emb|CAK22559.1| Possible sulfotransferase [Synechococcus sp. WH 7803]
          Length = 476

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)

Query: 190 EQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGM 249
           ++L  +D V   H K++      +  G+ WR+ L       P    +  +T     + G+
Sbjct: 5   DRLKEFDLVVHCHTKRTPHAPDGF--GESWRQSLLQCTFPNPDRC-QEFQTLLHKPEAGL 61

Query: 250 IGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQ-DQKLDFFAGTMFWVRTEALDP 308
           I      +P+++  +  + G N      L   MG T + D  L F AG+ FW R ++L  
Sbjct: 62  I----MPWPHRFVAHNVNWGSNFTQTRALMNLMGHTIRRDTLLAFPAGSFFWARVDSL-- 115

Query: 309 IKNLRLSRYFEPKVHKAL--DGEIEHAVERCFSL 340
           +  L L+  +E    + L  DG + H++ERC  L
Sbjct: 116 LALLDLTLRWEDFAAEPLPGDGRLAHSLERCLGL 149


>gi|73539274|ref|YP_299641.1| sensor histidine kinase [Ralstonia eutropha JMP134]
 gi|72122611|gb|AAZ64797.1| ATP-binding region, ATPase-like:MASE1:Histidine kinase,
           dimerisation and phosphoacceptor region [Ralstonia
           eutropha JMP134]
          Length = 556

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 11/114 (9%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT---ESASIKSEILKIFPAARIHI 172
           A  A++   Y +   I I ++L+N+S+   LH+ +V     +A+  +    +  AAR HI
Sbjct: 50  ALAALLTMGYVVAPGIAIGSVLANVSVGVPLHIAVVIGLGATAAALAATWLLTRAARFHI 109

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCK--------IHGKKSKRKGYSWWEGDL 218
             +  RDVL FLI+      +    V          + G +  R    WW GD+
Sbjct: 110 ALDRIRDVLAFLIVAAIFSTAVSALVGATVLRGGGLLAGSQYGRAMLEWWLGDM 163


>gi|308813905|ref|XP_003084258.1| conserved domain protein (ISS) [Ostreococcus tauri]
 gi|116056142|emb|CAL58323.1| conserved domain protein (ISS) [Ostreococcus tauri]
          Length = 684

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 55/276 (19%), Positives = 99/276 (35%), Gaps = 41/276 (14%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKI 164
           ++G  +Q+A      ++   +   + ++  ++   L +S    V    E A      L+ 
Sbjct: 72  SVGFFLQLAQSVNDGLLKSCFDNLMKVQSDSVQLQLYLSLTPTVANAPEVAYFTERFLRN 131

Query: 165 FPAARIHIMENHGRDVLPFLILLET--EQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRW 222
               R+  +++ G D+  FL  L     +L  + Y+ K+H K             +W   
Sbjct: 132 EKNIRVVHVKDEGYDIGAFLKQLHRFRHELQVHQYILKVHSKSDP----------IWLER 181

Query: 223 LFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAY-----------------RYPNKYCDYT 265
               L G+   V  I++ F+T   + ++                      +Y NK    T
Sbjct: 182 AVESLCGSEHQVKSILKAFETQSTLDIVSPMGSTFSATTSKDAVFPHLKRKYFNKVDLAT 241

Query: 266 CSLGKNREMICTLAGRMGIT----FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPK 321
               K    +  L  ++G+     F+       AGTMFW R   L       L R FE  
Sbjct: 242 AFDDKTMHTMERLCAQLGLEACPYFEKYLASITAGTMFWARNSRL---YTEHLPRLFESI 298

Query: 322 VHK-----ALDGEIEHAVERCFSLSVKKANFRISDV 352
            ++     + +  IEHA+ER      +     I D+
Sbjct: 299 RNELSQDYSNNNRIEHALERLIPTLSRLNGRMIGDI 334


>gi|326784138|ref|YP_004324531.1| hypothetical protein Syn1_160 [Prochlorococcus phage Syn1]
 gi|310004870|gb|ADO99261.1| hypothetical protein Syn1_160 [Prochlorococcus phage Syn1]
          Length = 398

 Score = 37.4 bits (85), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 18/109 (16%)

Query: 36  GGFFFWFWTLFYKRSKKLCYDEN---------------YVVAYGSRSGKKFFAQSNLYMM 80
           G FF    ++F K   K+CY E                + + Y S+ G K   Q +L   
Sbjct: 67  GRFFVGTKSVFNKTEPKICYSEKAIDKLYEGDLAEKLKFALRYFSQLGIKGVIQGDLMFT 126

Query: 81  ERELH---FDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYY 126
           +  L     DG+R+H F      +  P    + + A  AKI +V H +Y
Sbjct: 127 DSTLKTETVDGERLHTFRPNTITYAIPVDHPIGKAAGAAKIGVVFHTHY 175


>gi|258597730|ref|XP_001348427.2| conserved Plasmodium membrane protein, unknown function [Plasmodium
           falciparum 3D7]
 gi|255528816|gb|AAN36866.2| conserved Plasmodium membrane protein, unknown function [Plasmodium
           falciparum 3D7]
          Length = 526

 Score = 37.4 bits (85), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/134 (20%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 42  FWTLFYKRSKKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGW 101
           F+++FY ++        +   YG+     F+  S  Y++++  +     IH F   ++  
Sbjct: 111 FYSIFYTKTV-------FSKDYGNNIYDIFYVASISYILQKRFNMRKSSIHDFQHCMNT- 162

Query: 102 ESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEI 161
           E+  + +++Q  I   I  ++  Y +   ++I   + N S+SF++ V+++T    +   +
Sbjct: 163 ETKNIIELIQKGIILNIIPLIFSYVLSFIVDILMTIIN-SVSFNIIVSILTHPFDVILSL 221

Query: 162 LKIFPAARIHIMEN 175
            KI+  + I+++ N
Sbjct: 222 PKIYNLSNIYVITN 235


>gi|328772459|gb|EGF82497.1| hypothetical protein BATDEDRAFT_23048 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1000

 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE 160
           W++       +I +     +V H +Y+D W E  NL +  S  F L VT+    AS+K  
Sbjct: 823 WQAYTAKNSDEITLSVGDWVVAHHHYLDGWAEGVNLTTRQSGLFPLPVTIPRGGASLKIA 882

Query: 161 ILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCK 200
           ++    A + H  E  GRD+L   +L   + +    Y+ +
Sbjct: 883 VIN---ATKSH-FEIFGRDILTGALLAYPQHIQITHYLSR 918


Searching..................................................done


Results from round 2




>gi|254780923|ref|YP_003065336.1| hypothetical protein CLIBASIA_04110 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040600|gb|ACT57396.1| hypothetical protein CLIBASIA_04110 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 365

 Score =  514 bits (1324), Expect = e-144,   Method: Composition-based stats.
 Identities = 365/365 (100%), Positives = 365/365 (100%)

Query: 1   MPVSGCSKGYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWTLFYKRSKKLCYDENYV 60
           MPVSGCSKGYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWTLFYKRSKKLCYDENYV
Sbjct: 1   MPVSGCSKGYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWTLFYKRSKKLCYDENYV 60

Query: 61  VAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAI 120
           VAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAI
Sbjct: 61  VAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAI 120

Query: 121 VVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDV 180
           VVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDV
Sbjct: 121 VVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDV 180

Query: 181 LPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRT 240
           LPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRT
Sbjct: 181 LPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRT 240

Query: 241 FDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFW 300
           FDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFW
Sbjct: 241 FDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFW 300

Query: 301 VRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRK 360
           VRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRK
Sbjct: 301 VRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRK 360

Query: 361 SLSQN 365
           SLSQN
Sbjct: 361 SLSQN 365


>gi|315122651|ref|YP_004063140.1| hypothetical protein CKC_04515 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496053|gb|ADR52652.1| hypothetical protein CKC_04515 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 405

 Score =  445 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 222/366 (60%), Positives = 282/366 (77%), Gaps = 7/366 (1%)

Query: 1   MPVSGCSKGYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWTLF-YKRSKKLCYDENY 59
           +PVSGC KGY LF S  ++WNF S+H  I KV+ + GFFFW  +LF +KR + L YDEN 
Sbjct: 38  LPVSGCRKGYLLFVSRRENWNFDSNHLVIRKVSFFLGFFFWIRSLFLFKRYQTLRYDENR 97

Query: 60  VVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIA 119
           ++AYGSR GKKFFA SN  M+ R + FDG++IH FP+LLHGW+SP+  K+  + I++++A
Sbjct: 98  IIAYGSRIGKKFFACSNKDMLARGVPFDGEKIHRFPRLLHGWDSPSSEKIASVKIQSRVA 157

Query: 120 IVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRD 179
           IVVH+YY DLW EIANLLS L+ SFDLH+TLVTE ASIKSEILK FP A I++MEN+GRD
Sbjct: 158 IVVHIYYADLWAEIANLLSGLNFSFDLHITLVTEIASIKSEILKRFPNAHIYVMENYGRD 217

Query: 180 VLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIR 239
           +  FL LLE  +L +YDYVCKIHGKKSKR G+ WW+GDLWRRWLF+DLLGAPG+  +II+
Sbjct: 218 IRSFLKLLEGGKLDSYDYVCKIHGKKSKRNGHVWWDGDLWRRWLFFDLLGAPGIALEIIK 277

Query: 240 TFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMF 299
           TF+ +  IGMIGSR YRY     D   SLG NRE +C +A +MG++F+D K+DFF GTMF
Sbjct: 278 TFEKYPKIGMIGSRTYRY-----DQKISLGNNREFVCAIANKMGVSFEDTKIDFFGGTMF 332

Query: 300 WVRTEALDPIKNLRLSRYFEPKVHK-ALDGEIEHAVERCFSLSVKKANFRISDVDCILGY 358
           WVR +ALDPIKNL L++YF+ KV    LDG +EHA+ERCFS+SV+KANF ++ VDC+   
Sbjct: 333 WVRPQALDPIKNLALTQYFKSKVDMVGLDGCLEHAIERCFSISVEKANFDLAYVDCLSEE 392

Query: 359 RKSLSQ 364
             + S 
Sbjct: 393 SDNKSS 398


>gi|315122628|ref|YP_004063117.1| hypothetical protein CKC_04400 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496030|gb|ADR52629.1| hypothetical protein CKC_04400 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 399

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 145/354 (40%), Positives = 212/354 (59%), Gaps = 4/354 (1%)

Query: 9   GYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWT-LFYKRSKKLCYDENYVVAYGSRS 67
           GY++  S  K     S+    E+V  +    FW  + L + +  +L +    +  YGSR 
Sbjct: 45  GYYMLWSLSKEQKITSEDVFFEEVTTFKACLFWLRSFLTFSKYSQLSFPSCRIFFYGSRK 104

Query: 68  GKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWES-PAMGKVMQIAIKAKIAIVVHLYY 126
            KK F + N +M    + FDG++  +  +L  GW++  ++    +I I +KIAIVVH YY
Sbjct: 105 DKKAFFRLNRFMSNSRMPFDGKKFLYIKELFEGWKNLSSLDNKGKIKINSKIAIVVHCYY 164

Query: 127 IDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
            D W EI++LL  L+  FDL +T V ++   + ++LK FP+AR+++MEN GRDVLPFL L
Sbjct: 165 QDTWDEISHLLLRLNFDFDLFITTVKKNKDFEQDVLKNFPSARLYVMENKGRDVLPFLCL 224

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           LE     +YDY+CKIHGKKS R+ Y  +EG LWRRW+F+DLLG   +  +II  F+ +  
Sbjct: 225 LELGVFYDYDYLCKIHGKKSARRNYHPFEGILWRRWIFFDLLGFSDIALRIINKFEQNPS 284

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
           IGMIGS  +R   KY  +     K  + +  LA R+    ++  LDFF GTMFWVR + L
Sbjct: 285 IGMIGSGRFRRYKKY-SFFKKRSKVYKRVVDLARRIDFPVEELDLDFFNGTMFWVRPKCL 343

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRK 360
           +P++N+ L+  FE +     DG +EHAVER F LSV++A F +  VDC+  Y +
Sbjct: 344 EPLRNIHLTGEFE-EECNLEDGALEHAVERFFPLSVQRAGFSLESVDCVAEYDQ 396


>gi|254780201|ref|YP_003064614.1| hypothetical protein CLIBASIA_00430 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254039878|gb|ACT56674.1| hypothetical protein CLIBASIA_00430 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 394

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/356 (40%), Positives = 211/356 (59%), Gaps = 4/356 (1%)

Query: 9   GYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWT-LFYKRSKKLCYDENYVVAYGSRS 67
           GY++  S        S   + ++++++  F FW  + L + +  KL +    +  YGSR 
Sbjct: 40  GYYVLWSFSPKQRITSKDVHFQELSIFESFIFWLRSFLAFSKYSKLSFPSCRIFFYGSRK 99

Query: 68  GKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGW-ESPAMGKVMQIAIKAKIAIVVHLYY 126
            +K F + N +M    + FD ++  +  +L  GW + P+  K   + IK+KIAIVVH YY
Sbjct: 100 EQKAFLRLNRFMSNSRMPFDSEKFLYVKELFEGWNDRPSSPKKSGLTIKSKIAIVVHCYY 159

Query: 127 IDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
            D WIEI+++L  L+  FDL VT+V  +   + ++LK FP+A++++MEN GRDV PFL L
Sbjct: 160 QDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPSAQLYVMENKGRDVRPFLYL 219

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           LE      YDY+CKIHGKKS+R+GY   EG +WRRWLF+DLLG   +  +II TF+ +  
Sbjct: 220 LELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPC 279

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
           +GMIGSR YR   ++  +     +    +  LA R G   +   LDFF GTMFWV+ + L
Sbjct: 280 LGMIGSRRYRRYKRWSFFAKR-SEVYRRVIDLAKRAGFPTKRLHLDFFNGTMFWVKPKCL 338

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRKSL 362
           +P++NL L   FE +     DG +EHAVER F+ SV+   F I  VDC+  Y + L
Sbjct: 339 EPLRNLHLIGEFE-EERNLKDGALEHAVERFFACSVRYTEFSIESVDCVAEYERLL 393


>gi|13474020|ref|NP_105588.1| hypothetical protein mll4799 [Mesorhizobium loti MAFF303099]
 gi|14024772|dbj|BAB51374.1| mll4799 [Mesorhizobium loti MAFF303099]
          Length = 386

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 109/308 (35%), Positives = 156/308 (50%), Gaps = 18/308 (5%)

Query: 56  DENYVVA--YGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIA 113
            E   +A   GS +G  F   S+        HF+G +    P+ L               
Sbjct: 91  PEGRELARALGSLAGWGFGTASDNLQKTLSRHFNGPQAEA-PERLP-------------T 136

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIM 173
           ++ KIA+ +HL+Y DLW E   LL      F L +TL    A++   +   FP A I + 
Sbjct: 137 VEPKIAVALHLHYPDLWPEFEALLEATGRQFQLFLTLTRPDAALAQRVQARFPGAEITVY 196

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           EN GRDV PF+ LL   +   +D +CK+HGKKS + G     G++WR+   +DL+G+ GV
Sbjct: 197 ENRGRDVGPFIQLLREGKFDPFDLICKLHGKKSGQSGPRMVLGEIWRQVSAFDLIGSRGV 256

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
           V +II  F+   D  MIGSR +R PN++     + G+NR M   L   MG+     +LDF
Sbjct: 257 VDRIIANFERSPDTQMIGSRRFRLPNEWKGEKSAWGENRAMALNLLETMGMP-SSSRLDF 315

Query: 294 FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVD 353
           FAGTMFWVR  AL+P++ L L     P+     DG ++HA+ER   +   K     SD D
Sbjct: 316 FAGTMFWVRRGALEPLRRLDLPLAAFPEETGQQDGTLQHALERVLGMICTKIGV-ASDGD 374

Query: 354 CILGYRKS 361
                R++
Sbjct: 375 MTTDSREA 382


>gi|320531350|ref|ZP_08032322.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320136441|gb|EFW28417.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 626

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 11/267 (4%)

Query: 90  RIHHFPQLLHGWESPAMGK---VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R  +   L+   +   +     V++   + K+A++ HLY++DL         ++    DL
Sbjct: 279 RSMNMADLVKNLQLTYVLPTQAVVREPKQQKVALIAHLYFMDLLDSTLAYARSMPEGTDL 338

Query: 147 HVTLVT-ESASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
            +T+ + E A +     +  P    + ++EN GRDV   L+  + + + +YD VC +H K
Sbjct: 339 ILTVGSQEKAELVERACQDLPYNVDVRVIENRGRDVSALLVGCK-DIVDDYDLVCFMHDK 397

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +    +  G+ + R  F +LL     V  ++ TFD+   +G++      + + +  Y
Sbjct: 398 KVTQLS-PYTVGEGFARKCFDNLLPTREFVENVVATFDSEPRLGLLSPTPPNHADYFPIY 456

Query: 265 TCSLGKNREMICTLAGR---MGITFQDQK-LDFFAGTMFWVRTEALDPIKNLRLSRYFEP 320
           + S G N +    L  +   + +     K +    GTMFW R  AL P+ +        P
Sbjct: 457 SYSWGPNFDRTKMLLEKELNLNVPLDAHKEVIAPLGTMFWFRPAALKPLFDHDWQWEDFP 516

Query: 321 KVHKALDGEIEHAVERCFSLSVKKANF 347
                +DG I HA+ER +    + + +
Sbjct: 517 PEPNDIDGTILHAIERAYGYVAQASGY 543


>gi|329944276|ref|ZP_08292535.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328531006|gb|EGF57862.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 636

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 10/266 (3%)

Query: 90  RIHHFPQLLHGWESPAMGK---VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R  +   L+   +   +     V++   K KIA++ HLYY+DL       + N+    D+
Sbjct: 279 RSMNMADLVKNLQLTYVLPTQAVVREPKKQKIALIAHLYYMDLVEPTLKYIRNMPEGIDI 338

Query: 147 HVTLVT-ESASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
            ++  + E         K  P    + ++EN GRDV PFL+  + + + +YD VC  H K
Sbjct: 339 FLSTSSPEKVEQVEAACKGLPYNIEVRLVENRGRDVGPFLVAWK-DVVHDYDVVCYTHDK 397

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +  Y +  GD +    F +LL     V  +I TFD    +G +      + + +  +
Sbjct: 398 KVTQL-YPYSVGDGFAYKCFENLLPTRDFVKNVIATFDAEPRLGFLAPTPPNHADYFPVF 456

Query: 265 TCSLGKNREMICTLAGRMGITFQDQKLD---FFAGTMFWVRTEALDPIKNLRLSRYFEPK 321
           T   G N +    L   +G+              G+MFW R +AL P+ +        P 
Sbjct: 457 TYGWGPNFDRTKALLRELGLDVPLDPTKEPIAPLGSMFWFRPQALKPLFDHDWQWEEFPP 516

Query: 322 VHKALDGEIEHAVERCFSLSVKKANF 347
               +DG + HA+ER      + + +
Sbjct: 517 EPCPIDGTLMHAIERSHGYVAQGSGY 542


>gi|326772082|ref|ZP_08231367.1| rhamnan synthesis protein F [Actinomyces viscosus C505]
 gi|326638215|gb|EGE39116.1| rhamnan synthesis protein F [Actinomyces viscosus C505]
          Length = 652

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 11/267 (4%)

Query: 90  RIHHFPQLLHGWESPAMGK---VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R  +   L+   +   +     V +     K+A++ HLYY+DL         ++    D 
Sbjct: 305 RSMNMADLVKNLQLTYVLPTQAVAREPKPQKVALIAHLYYMDLLEPTLAYARSMPEGTDF 364

Query: 147 HVTLVT-ESASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
            +T+ + E   +  E  K  P    + ++EN GRDV   L+  + + +S+YD VC IH K
Sbjct: 365 ILTVGSQEKVELVEEACKDLPYNVTVRLIENRGRDVSALLVGCK-DIVSDYDLVCFIHDK 423

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +    +  G+ + R  F +LL     V  +I TFD+   +G++      + + +  Y
Sbjct: 424 KVTQLS-PYTVGEGFARKCFDNLLPTREFVENVISTFDSEPRLGLLSPTPPNHADYFPIY 482

Query: 265 TCSLGKNREMICTLAGR-MGITFQDQKLD---FFAGTMFWVRTEALDPIKNLRLSRYFEP 320
           + S G N +    L  + + ++             GTMFW R  AL P+ +        P
Sbjct: 483 SYSWGPNFDRTKMLLEKELNLSVPLDAHKEVIAPLGTMFWFRPAALKPLFDHDWQWEDFP 542

Query: 321 KVHKALDGEIEHAVERCFSLSVKKANF 347
                +DG I HA+ER +    + + +
Sbjct: 543 PEPNDIDGTILHAIERAYGYVAQASGY 569


>gi|221634566|ref|YP_002523254.1| Lipopolysaccharide biosynthesis protein-like protein [Rhodobacter
           sphaeroides KD131]
 gi|221163439|gb|ACM04401.1| Lipopolysaccharide biosynthesis protein-like protein [Rhodobacter
           sphaeroides KD131]
          Length = 755

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 138/325 (42%), Gaps = 32/325 (9%)

Query: 53  LCYDENYVVAYGSRSGKK----FFAQSNLYMME--------------RELHFDGQRIHHF 94
           L Y E + +AYG R G +    F  Q+ L                  R  H + +     
Sbjct: 54  LKYPEKHYIAYGERLGYRPNPDFSPQAYLRYHPDVAEAGVPPFLHYVRVGHAEQRLTKEL 113

Query: 95  PQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-- 151
           P+++            +   + A  A+ VH+YY DLW E A  L  L I FDL+VTL   
Sbjct: 114 PEVVALPARGMPQVRFEHGRQTAPYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVTLTYR 173

Query: 152 -TESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
             E+ ++  EI   FP A +  M N GRD+LPF+ LL       Y  VCK H KKS  + 
Sbjct: 174 GEETDALAQEIRADFPGAFVTPMPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKSPHRQ 233

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
               +GDLWR+ L   +L   G+  K +  F    + G   +    Y       T   G 
Sbjct: 234 ----DGDLWRKHLIEGILPETGLEEK-LEAFVEAPEAGFWVADGQHYTG-----TQWWGS 283

Query: 271 NREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
           N E    L  R+ I    + L F AG+++WV+   L  +++L+L           +DG +
Sbjct: 284 NVEATRHLLQRIEIPLDREALSFPAGSIYWVKPLVLGLLRSLQLRLEDFDIEEGQVDGTL 343

Query: 331 EHAVERCFSLSVKKANFRISDVDCI 355
            HA+ER       +A  ++     +
Sbjct: 344 AHAIERVLGYLTARAGQKVLQTSEL 368


>gi|126464825|ref|YP_001041801.1| lipopolysaccharide biosynthesis protein-like [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126106640|gb|ABN79165.1| Lipopolysaccharide biosynthesis protein-like [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 751

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 138/325 (42%), Gaps = 32/325 (9%)

Query: 53  LCYDENYVVAYGSRSGKK----FFAQSNLYMME--------------RELHFDGQRIHHF 94
           L Y E + +AYG R G +    F  Q+ L                  R  H + +     
Sbjct: 50  LKYPEKHYIAYGERLGYRPNPDFSPQAYLRYHPDVAEAGVPPFLHYVRVGHAEQRLTKEL 109

Query: 95  PQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-- 151
           P+++            +   + A  A+ VH+YY DLW E A  L  L I FDL+VTL   
Sbjct: 110 PEVVALPARGMPQVRFEHGRQTAPYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVTLTYR 169

Query: 152 -TESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
             E+ ++  EI   FP A +  M N GRD+LPF+ LL       Y  VCK H KKS  + 
Sbjct: 170 GEETDALAEEIRADFPGAFVTPMPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKSPHRQ 229

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
               +GDLWR+ L   +L   G+  K +  F    + G   +    Y       T   G 
Sbjct: 230 ----DGDLWRKHLIEGILPETGLEEK-LEAFVEAPEAGFWVADGQHYTG-----TQWWGS 279

Query: 271 NREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
           N E    L  R+ I    + L F AG+++WV+   L  +++L+L           +DG +
Sbjct: 280 NVEATRHLLQRIEIPLDREALSFPAGSIYWVKPLVLGLLRSLQLRLEDFDIEEGQVDGTL 339

Query: 331 EHAVERCFSLSVKKANFRISDVDCI 355
            HA+ER       +A  ++     +
Sbjct: 340 AHAIERVLGYLTARAGQKVLQTSEL 364


>gi|125654691|ref|YP_001033885.1| hypothetical protein RSP_3918 [Rhodobacter sphaeroides 2.4.1]
 gi|77386351|gb|ABA81780.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 751

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 138/325 (42%), Gaps = 32/325 (9%)

Query: 53  LCYDENYVVAYGSRSGKK----FFAQSNLYMME--------------RELHFDGQRIHHF 94
           L Y E + +AYG R G +    F  Q+ L                  R  H + +     
Sbjct: 50  LKYPEKHYIAYGERLGYRPNPDFSPQAYLRYHPDVAEAGVPPFLHYVRVGHAEQRLTKEL 109

Query: 95  PQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-- 151
           P+++            +   + A  A+ VH+YY DLW E A  L  L I FDL+VTL   
Sbjct: 110 PEVVALPARGMPQVRFEHGRQTAPYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVTLTYR 169

Query: 152 -TESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
             E+ ++  EI   FP A +  M N GRD+LPF+ LL       Y  VCK H KKS  + 
Sbjct: 170 GEETDALAEEIRADFPGAFVTPMPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKSPHRQ 229

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
               +GDLWR+ L   +L   G+  K +  F    + G   +    Y       T   G 
Sbjct: 230 ----DGDLWRKHLIEGILPETGLEEK-LEAFVEAPEAGFWVADGQHYTG-----TQWWGS 279

Query: 271 NREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
           N E    L  R+ I    + L F AG+++WV+   L  +++L+L           +DG +
Sbjct: 280 NVEATRHLLQRIEIPLDREALSFPAGSIYWVKPLVLGLLRSLQLRLEDFDLEEGQVDGTL 339

Query: 331 EHAVERCFSLSVKKANFRISDVDCI 355
            HA+ER       +A  ++     +
Sbjct: 340 AHAIERVLGYLTARAGQKVLQTSEL 364


>gi|332561391|ref|ZP_08415706.1| hypothetical protein RSWS8N_20164 [Rhodobacter sphaeroides WS8N]
 gi|332274190|gb|EGJ19507.1| hypothetical protein RSWS8N_20164 [Rhodobacter sphaeroides WS8N]
          Length = 751

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 138/325 (42%), Gaps = 32/325 (9%)

Query: 53  LCYDENYVVAYGSRSGKK----FFAQSNLYMME--------------RELHFDGQRIHHF 94
           L Y E + +AYG R G +    F  Q+ L                  R  H + +     
Sbjct: 50  LKYPEKHYIAYGERLGYRPNPDFSPQAYLRYHPDVAEAGVPPFLHYVRVGHAEQRLTKEL 109

Query: 95  PQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-- 151
           P+++            +   + A  A+ VH+YY DLW E A  L  L I FDL+VTL   
Sbjct: 110 PEVVALPARGMPQVRFEHGRQTAPYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVTLTYR 169

Query: 152 -TESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
             E+ ++  EI   FP A +  M N GRD+LPF+ LL       Y  VCK H KKS  + 
Sbjct: 170 GEETDALAEEIRADFPGAFVTPMPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKSPHRQ 229

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
               +GDLWR+ L   +L   G+  K +  F    + G   +    Y       T   G 
Sbjct: 230 ----DGDLWRKHLIEGILPETGLEEK-LEAFVEAPEAGFWVADGQHYTG-----TQWWGS 279

Query: 271 NREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
           N E    L  R+ I    + L F AG+++WV+   L  +++L+L           +DG +
Sbjct: 280 NVEATRHLLQRIEIPLDREALSFPAGSIYWVKPLVLGLLRSLQLRLEDFDLEEGQVDGTL 339

Query: 331 EHAVERCFSLSVKKANFRISDVDCI 355
            HA+ER       +A  ++     +
Sbjct: 340 AHAIERVLGYLTARAGQKVLQTSEL 364


>gi|325067622|ref|ZP_08126295.1| hypothetical protein AoriK_07369 [Actinomyces oris K20]
          Length = 626

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 11/267 (4%)

Query: 90  RIHHFPQLLHGWESPAMGKVMQI---AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R  +   L+       +     +       KIA++ HLYY+DL       + ++    DL
Sbjct: 279 RSMNMADLVKNLHLTYVLPTQAVVHEPKPQKIALIAHLYYMDLLEPTLAYVKSMPEGTDL 338

Query: 147 HVTLVT-ESASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
            +T+ + E A +  E  K  P    + ++EN GRDV   L+  + + + +YD VC  H K
Sbjct: 339 ILTVGSQEKAELVEEACKDLPYNVTVRLIENRGRDVSALLVGCK-DIIHDYDLVCFTHDK 397

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +    +  GD +    F +LL     V  +I TFD    +G++      + + +  +
Sbjct: 398 KVTQVK-PYSVGDGFAIKCFENLLATRDFVKNVIATFDAEPRLGLLAPTPPNHGDYFPVF 456

Query: 265 TCSLGKNREMICTLAGR---MGITFQDQKLD-FFAGTMFWVRTEALDPIKNLRLSRYFEP 320
           +   G N E   TL  +   + +   + +      GTMFW R  AL P+ +        P
Sbjct: 457 SMGWGPNFERTKTLLEKELNLSVPIDESRAPIAPLGTMFWFRPAALKPLFDHDWQWEDFP 516

Query: 321 KVHKALDGEIEHAVERCFSLSVKKANF 347
                +DG I HA+ER +    + + +
Sbjct: 517 PEPNNIDGTILHAIERAYGYVAQASGY 543


>gi|227546966|ref|ZP_03977015.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212567|gb|EEI80455.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 631

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 11/272 (4%)

Query: 90  RIHHFPQLLHGWESPAMGK---VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R  +   L+       +      + +    KIA+ +H+YY+DL     + + ++    D+
Sbjct: 280 RTMNVADLMKNLHLDYVLPQSLSVPLPEGKKIALAIHVYYMDLLESTFHYIQSMPEGCDI 339

Query: 147 HVTLVTE-SASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
            +T+ +E +A    E  K FP    + ++EN GRDV   L+    +    YDYVC  H K
Sbjct: 340 IITVGSEANAETVREYCKQFPYNFDVRVIENRGRDVSALLVGCGEDLF-QYDYVCFAHDK 398

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +       GD +    F ++L +   V  +I  F+ +  +G+       + + +  Y
Sbjct: 399 KVTQLSPQSI-GDGFAYKCFENILASKEYVSNVIDLFERNPRLGIAMPTPPNHASYFPGY 457

Query: 265 TCSLGKNREMICTLAGR---MGITFQ-DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEP 320
           T   G N         +   M +    D++     GTMFW R EA   + +        P
Sbjct: 458 TFPWGPNFPGTKDFLEQTLNMHVPLNADKEPVAPMGTMFWFRPEAFRGLLDHGWEYTDFP 517

Query: 321 KVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
                +DG + H +ER +    +   +  + +
Sbjct: 518 PEPNKVDGTLLHFIERAYGYVPQANGYYPAYI 549


>gi|331086190|ref|ZP_08335272.1| hypothetical protein HMPREF0987_01575 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406349|gb|EGG85863.1| hypothetical protein HMPREF0987_01575 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 592

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 8/246 (3%)

Query: 109 VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASI-KSEILKIFP- 166
           + +   + KIA+V+HLY+ DL  E  + +S +    D+++T  TE       ++    P 
Sbjct: 249 LQKQTTENKIALVMHLYFEDLLEESYHYVSAMPEKADIYLTTDTEKKKAAIEKVFAKLPC 308

Query: 167 -AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFY 225
               + +++N GRDV   L+ ++ + + +YD VC  H KK+ +       G  +    F 
Sbjct: 309 NKLEVRVIKNRGRDVSSLLVGVK-DVIMDYDLVCFAHDKKTAQVKPGTI-GASFAYKCFE 366

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT 285
           + L     V  +I TF  +  +G++      +   +       G N  +   LA ++G+T
Sbjct: 367 NTLSNKAYVGNVINTFVNNPRMGLLCPPEPNHSTFFTTIGFEWGPNFNITRDLAKKLGLT 426

Query: 286 FQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV 342
                        GTMFW R +A+ P+ N        P     +DG + HA+ER +   V
Sbjct: 427 VPISVASPPVAPLGTMFWFRPKAMKPLYNKDWKYEDFPAEPNKIDGTLLHAIERIYPFIV 486

Query: 343 KKANFR 348
           +++ + 
Sbjct: 487 QESGYY 492


>gi|311063512|ref|YP_003970237.1| lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           PRL2010]
 gi|310865831|gb|ADP35200.1| lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           PRL2010]
          Length = 631

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 11/272 (4%)

Query: 90  RIHHFPQLLHGWESP---AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R  +   L+         +    + +    KIA+ +H+YY+DL       + ++    D+
Sbjct: 280 RTMNVADLMKNLHLDYVLSQSLSVPLPEGKKIALAIHVYYMDLLESTFRYIQSMPEGCDI 339

Query: 147 HVTLVTE-SASIKSEILKIFPAA-RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
            +T+ +E +A I  E  K FP    + ++EN GRDV   L+    +    YDYVC  H K
Sbjct: 340 IITVGSEANAEIVREYCKQFPYRFDVRVIENRGRDVSSLLVGCGEDLF-QYDYVCFAHDK 398

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +       GD +    + ++L +   V  +I  F+ +  +G+       + + +  Y
Sbjct: 399 KVTQLSPQSI-GDGFAYKCYENILASKEYVSNVIDLFEKNPRLGIAMPTPPNHASYFPGY 457

Query: 265 TCSLGKNREMICTLAGR---MGITFQ-DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEP 320
           T   G N         +   M +    +++     GTMFW R EA   + +        P
Sbjct: 458 TFPWGPNFPGTKDFLEQTLNMHVPLNANKEPVAPMGTMFWFRPEAFRGLLDHGWKYEDFP 517

Query: 321 KVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
                +DG + H +ER +    +   +  + +
Sbjct: 518 PEPNKVDGTLLHFIERAYGYVPQANGYYPAYI 549


>gi|289662624|ref|ZP_06484205.1| hypothetical protein XcampvN_05932 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 945

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 102 ESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE- 160
           ++P    V    ++ K+ ++VH++Y DL  E A  L  + + +DL V+++  +A  ++  
Sbjct: 69  QAPFGRPVPSAQLQLKVGVMVHVFYPDLIDEFAQSLQQMPVGYDLLVSVMDNAAEAQARD 128

Query: 161 ---ILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGD 217
               L+      I I+ N GRD+ P L+    EQ+   D V  +H KKS    Y+  E  
Sbjct: 129 RFSKLQQIEKLDIRIVPNRGRDIAPLLVTFR-EQILALDVVGHLHTKKSL---YTGSEQG 184

Query: 218 LWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT 277
            WRR+L   L+G+   +   +  F     +GM+   +Y    +   +  +   N E+  T
Sbjct: 185 QWRRYLVSSLMGSAERIAWQLGMFQAEPRLGMLYPESY---ERVPLWAHTWLSNFEVCRT 241

Query: 278 LAGRMGITFQ-DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
           LA R+G      + +DF AG+MFW + +AL P+  L L     P+ H  +DG + HA+ER
Sbjct: 242 LAQRLGFDINASEYIDFPAGSMFWAKVDALRPLYALNLELKDFPEEHGQIDGTLHHAMER 301

Query: 337 CFSLSVKKANFRISDVDC 354
            F   V+  ++RI  +  
Sbjct: 302 MFVAVVRHQHYRIGILPQ 319


>gi|312133751|ref|YP_004001090.1| protein [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773029|gb|ADQ02517.1| Hypothetical protein BBMN68_1492 [Bifidobacterium longum subsp.
           longum BBMN68]
          Length = 641

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 64/253 (25%), Positives = 105/253 (41%), Gaps = 7/253 (2%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESAS-IKSEILK 163
           +      I  K ++A+V+HLYY+D+  +I     ++    D+ +T+ +E  + I  E  +
Sbjct: 298 SQDNAQPIPQKFRVALVLHLYYMDILDQILRYARSMPEGCDVIITVGSEEKACIVKERCE 357

Query: 164 IFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRW 222
             P    + ++EN GRDV   L+    + L NYD VC  H KK ++       GD + + 
Sbjct: 358 GMPYNIDVRVIENRGRDVSALLVGAGKDVL-NYDLVCFAHDKKVRQL-RPETIGDGFAKK 415

Query: 223 LFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRM 282
            F + L +   V  II  F  +  +G+    A  + + +  Y  S G N      L   +
Sbjct: 416 CFENTLASKAYVANIINLFADNPRLGVAMPSAPNHADYFYSYAFSWGPNYRGTKDLLDGL 475

Query: 283 GITFQDQKLD---FFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
           GI              GTMFW R +AL  + +        P      DG   H VER + 
Sbjct: 476 GIKVPLSPHADVIAPLGTMFWFRPKALHGLIDKSWEYSDFPPEPNPADGSFLHFVERAYC 535

Query: 340 LSVKKANFRISDV 352
              +   +    +
Sbjct: 536 YVAQSNGYYSEYI 548


>gi|218455303|gb|AAX19606.2| WxocB [Xanthomonas oryzae pv. oryzicola]
          Length = 568

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 19/286 (6%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYID 128
             M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++ID
Sbjct: 270 RAMIEREVARMRQTRKNIMPIVTGDDSPASDELERYGVGAIDAESLSSRFAIVLHLFHID 329

Query: 129 LWIEIANLLSNLSISFDLHVTL--VTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
           L   I   + N+ + +D+ V++  +++         +    A + I  N GRDV PF+ L
Sbjct: 330 LIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L T  L  YD VCKIH KKS  +      G  WR  L   LLG+   V +++R FD H  
Sbjct: 390 LNTGLLDRYDAVCKIHSKKSVYRDG----GGQWRDDLMKALLGSSFDVLRVLRAFDDHPA 445

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  AL
Sbjct: 446 CGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAAL 500

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
             ++   +            D  + H +ER F L V++A F  +  
Sbjct: 501 SALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAGFFAATT 546


>gi|289668432|ref|ZP_06489507.1| hypothetical protein XcampmN_08015 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 945

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 102 ESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE- 160
           ++P    V    ++ K+ ++VH++Y DL  E A  L  + + +DL V+++  +A  ++  
Sbjct: 69  QAPFGRPVPSAQLQVKVGVMVHVFYPDLIDEFAQSLQQMPVGYDLLVSVMDNAAEAQARD 128

Query: 161 ---ILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGD 217
               L+      I I+ N GRD+ P L+    EQ+   D V  +H KKS    Y+  E  
Sbjct: 129 RFSKLQQIEKLDIRIVPNRGRDIAPLLVTFR-EQILALDVVGHLHTKKSL---YTGSEQG 184

Query: 218 LWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT 277
            WRR+L   L+G+   +   +  F     +GM+   +Y    +   +  +   N E+  T
Sbjct: 185 QWRRYLVSSLMGSAERIAWQLGMFQAEPRLGMLYPESY---ERVPLWAHTWLSNFEVCRT 241

Query: 278 LAGRMGITFQ-DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
           LA R+G      + +DF AG+MFW + +AL P+  L L     P+ H  +DG + HA+ER
Sbjct: 242 LAQRLGFDINASEYIDFPAGSMFWAKVDALRPLYALNLELKDFPEEHGQIDGTLHHAMER 301

Query: 337 CFSLSVKKANFRISDVDC 354
            F   V+  ++RI  +  
Sbjct: 302 MFVAVVRHQHYRIGILPQ 319


>gi|218455307|gb|AAX19610.2| WxocB [Xanthomonas oryzae pv. oryzicola]
 gi|218455309|gb|AAX19612.2| WxocB [Xanthomonas oryzae pv. oryzicola]
          Length = 568

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 19/286 (6%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYID 128
             M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++ID
Sbjct: 270 RAMIEREVARMRQTRKNIMPIVTGGDSPASDELERYGVGAIDAESLSSRFAIVLHLFHID 329

Query: 129 LWIEIANLLSNLSISFDLHVTL--VTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
           L   I   + N+ + +D+ V++  +++         +    A + I  N GRDV PF+ L
Sbjct: 330 LIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L T  L  YD VCKIH KKS         G  WR  L   LLG+   V +++R FD H  
Sbjct: 390 LNTGLLDRYDAVCKIHSKKSVYHDG----GGQWRDDLMKALLGSSFDVLRVLRAFDDHPA 445

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  AL
Sbjct: 446 CGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAAL 500

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
             ++   +            D  + H +ER F L V++A F  +  
Sbjct: 501 SALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAGFFAATT 546


>gi|166713474|ref|ZP_02244681.1| hypothetical protein Xoryp_19045 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 568

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 19/286 (6%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYID 128
             M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++ID
Sbjct: 270 RAMIEREVARMRQTRKNIMPIVTGDDSPASDELERYGVGAIDAESLSSRFAIVLHLFHID 329

Query: 129 LWIEIANLLSNLSISFDLHVTL--VTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
           L   I   + N+ + +D+ V++  +++         +    A + I  N GRDV PF+ L
Sbjct: 330 LIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L T  L  YD VCKIH KKS         G  WR  L   LLG+   V +++R FD H  
Sbjct: 390 LNTGLLDRYDAVCKIHSKKSVYHDG----GGQWRDDLMKALLGSSFDVLRVLRAFDDHPA 445

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  AL
Sbjct: 446 CGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAAL 500

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
             ++   +            D  + H +ER F L V++A F  +  
Sbjct: 501 SALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAGFFAATT 546


>gi|218455296|gb|AAV67426.2| glycosyltransferase [Xanthomonas oryzae pv. oryzicola]
 gi|218455299|gb|AAX19602.2| WxocB [Xanthomonas oryzae pv. oryzicola]
 gi|218455301|gb|AAX19604.2| WxocB [Xanthomonas oryzae pv. oryzicola]
          Length = 568

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 19/286 (6%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYID 128
             M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++ID
Sbjct: 270 RAMIEREVARMRQTRKNIMPIVTGDDSPASDELERYGVGAIDAESLSSRFAIVLHLFHID 329

Query: 129 LWIEIANLLSNLSISFDLHVTL--VTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
           L   I   + N+ + +D+ V++  +++         +    A + I  N GRDV PF+ L
Sbjct: 330 LIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L T  L  YD VCKIH KKS         G  WR  L   LLG+   V +++R FD H  
Sbjct: 390 LNTGLLDRYDAVCKIHSKKSVYHDG----GGQWRDDLMKALLGSSFDVLRVLRAFDDHPA 445

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  AL
Sbjct: 446 CGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAAL 500

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
             ++   +            D  + H +ER F L V++A F  +  
Sbjct: 501 SALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAGFFAATT 546


>gi|225352528|ref|ZP_03743551.1| hypothetical protein BIFPSEUDO_04151 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156722|gb|EEG70116.1| hypothetical protein BIFPSEUDO_04151 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 648

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 13/273 (4%)

Query: 90  RIHHFPQLLHGWESPAMGK---VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R  +   L+       +     +  I    +IA+++HLYY+DL  +      ++    D 
Sbjct: 280 RTMNLADLVRNLHLDFVLPSNTIAPIPTNKRIALIMHLYYMDLLDKTLEYAKSMPEGCDF 339

Query: 147 HVTL-VTESASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
             T+   E+A+I  E  K  P    + +++N GRDV   L+    + L  YDYVC  H K
Sbjct: 340 IFTVGSEENATIVRERCKDLPYNVDVRVIQNRGRDVSALLVGAGKDCL-QYDYVCFAHDK 398

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +       GD +    F ++LG+  +V  II  F+     G++      + + + ++
Sbjct: 399 KVTQLSPYSI-GDGFSYKCFENVLGSKALVSNIINHFENDPHAGVLAPAPPNHADYFGNF 457

Query: 265 TCSLGKNREMICTLAG-----RMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFE 319
               G N E    +       ++ +    + +    GTMFW R +AL    ++       
Sbjct: 458 ASLWGPNYEGTKKMLEETLQVKVPLDKSKEPIA-PMGTMFWFRPKALQQFFDIDWKYEDF 516

Query: 320 PKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
           P     +DG + H VER +    +   +    +
Sbjct: 517 PPEPNKIDGSMLHFVERAYGYVPQANGYYTGYI 549


>gi|218455305|gb|AAX19608.2| WxocB [Xanthomonas oryzae pv. oryzicola]
          Length = 568

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 19/286 (6%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPA--------MGKVMQIAIKAKIAIVVHLYYID 128
             M+ERE+    Q   +   ++ G +SPA        +G +   ++ ++ AIV+HL++ID
Sbjct: 270 RAMIEREVARMRQTRKNIMPIVTGDDSPASDELERYGVGAIDAESLSSRFAIVLHLFHID 329

Query: 129 LWIEIANLLSNLSISFDLHVTL--VTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
           L   I   + N+ + +D+ V++  +++         +    A + I  N GRDV PF+ L
Sbjct: 330 LIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHPNIGRDVGPFISL 389

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L T  L  YD VCK+H KKS         G  WR  L   LLG+   V +++R FD H  
Sbjct: 390 LNTGLLDRYDAVCKVHSKKSVYHDG----GGQWRDDLMKALLGSSFNVLRVLRAFDDHPA 445

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G++G       + Y       G N E +  LA   GI  +  +L FFAGTMFW R  AL
Sbjct: 446 CGIVGPE-----SAYLSNARFWGGNEERLRVLAAETGIEEKRIRLGFFAGTMFWFRPAAL 500

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
             ++   +            D  + H +ER F L V++A F  +  
Sbjct: 501 SALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAGFFAATT 546


>gi|308235695|ref|ZP_07666432.1| hypothetical protein GvagA14_05663 [Gardnerella vaginalis ATCC
           14018]
 gi|311114292|ref|YP_003985513.1| rhamnan synthesis protein F [Gardnerella vaginalis ATCC 14019]
 gi|310945786|gb|ADP38490.1| rhamnan synthesis protein F [Gardnerella vaginalis ATCC 14019]
          Length = 637

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 9/268 (3%)

Query: 91  IHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL 150
           + +     H  E+ +     +   K K+A+ +HLYY+DL  +  + + ++    D+ +T+
Sbjct: 290 LRYILPQNHVVENSSTA-TSESTAKPKVALCMHLYYMDLLDKSLHYIQSMPQGCDVILTV 348

Query: 151 VT-ESASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
            + E+  I  + ++  P    + ++EN GRDV  FL+    + L  YDYVC  H KK  +
Sbjct: 349 GSKENQQIVKQRVEHLPYDVDVRLIENRGRDVSAFLVGGGAD-LMKYDYVCFAHDKKVTQ 407

Query: 209 KGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL 268
                  GD +    F ++L +   V  +I  F+TH  +GM       + + +  +T + 
Sbjct: 408 LSPRSI-GDGFAYKCFENILASKEYVQNVINLFETHPRLGMAMPTPPNHADYFPGFTYTW 466

Query: 269 GKNREMICTLAGR-MGITFQ---DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHK 324
           G N E       + +GI+     ++      GTMFW RT+A+  + + + +    P    
Sbjct: 467 GPNFEGTKKFLEKTLGISVPLDENKDAIAPLGTMFWFRTKAMRGLLDRKWTYEDFPAEPL 526

Query: 325 ALDGEIEHAVERCFSLSVKKANFRISDV 352
            +DG + H +ER +    +   +  + +
Sbjct: 527 KIDGTLLHFIERAYGYVPQYNGYYDAYI 554


>gi|119026520|ref|YP_910365.1| hypothetical protein BAD_1502 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118766104|dbj|BAF40283.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 647

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 11/272 (4%)

Query: 90  RIHHFPQLLHGWESPAMGK---VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R  +   L+       +        I    +IA+++HLYY+DL  +      ++    D 
Sbjct: 279 RTMNLADLVKNLHLDFVMPSNITTPIPEGKRIALIMHLYYMDLLDKTLEYAKSMPEGCDF 338

Query: 147 HVTLVTE-SASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
             T+ +E +A +  E  K  P    + +++N GRDV   LI    + L  YDYVC  H K
Sbjct: 339 IFTVGSEENAKLVRERCKGLPYNVDVRVIQNRGRDVSALLIGAGKDCL-KYDYVCFAHDK 397

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +       GD +    F ++LG+  +V  II  F+     G++   +  + + + ++
Sbjct: 398 KVTQLSPYSI-GDGFAYKCFENILGSKALVSNIINHFEQDPHAGLLAPTSPNHADYFGNF 456

Query: 265 TCSLGKNREMICTLAGR-MGITFQDQK---LDFFAGTMFWVRTEALDPIKNLRLSRYFEP 320
               G N E    +    +G+              GTMFW R +AL  + ++       P
Sbjct: 457 ASLWGPNFEGTKKMLEETLGVKVPLNPYKEPIAPLGTMFWFRPKALHQLFDIDWKYEDFP 516

Query: 321 KVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
                +DG + H +ER +    +   +    V
Sbjct: 517 PEPNKIDGSMLHFIERAYGYLPQANGYYTGFV 548


>gi|258591058|emb|CBE67353.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 1460

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 12/240 (5%)

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA-SIKSEILKIFPAAR--- 169
           I ++IA+  H YY DL  E+A+ L N+  +FDL V++  + A  +  +     P AR   
Sbjct: 589 ISSRIAVHAHAYYPDLTKELASYLKNMPFAFDLFVSVSNDEARDVCRQAFAGLPQARRVI 648

Query: 170 IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
           + ++ N GRD+ P  +     +L+ YDY+C +H KKS    Y+  + D W  +L   L+G
Sbjct: 649 VDVVANRGRDIAPM-VCHFGGRLATYDYICHLHTKKSM---YAQGKMDGWLEYLLRQLMG 704

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGI-TFQD 288
           +   V +I   F +    G+I  + Y Y      +  +   N+ +   +  +MGI    +
Sbjct: 705 SEDQVRRIFSMFQSDPRAGIIYPQNYEYLPY---WGNTWLSNKALGAQMCRQMGITDVPE 761

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
              D+ AG+MFW R+EA+  + +  +     P+     DG + H +ER   L  + A ++
Sbjct: 762 GYFDYPAGSMFWARSEAIRNLFSADIRLTDFPEEAGQTDGSLAHCIERLLVLVARHAGYK 821


>gi|21111631|gb|AAM39945.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575237|gb|AAY50647.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 296

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 11/260 (4%)

Query: 106 MGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKI 164
              V          +V+H +Y+D+  E+ + +        + +T   T+   +   I + 
Sbjct: 37  APDVATEICSPSACVVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRR 96

Query: 165 FPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLF 224
              A +   EN GRD+LPFL +       N   V K+H KKS  +     +G+ WR  + 
Sbjct: 97  GIQAEVEGFENRGRDILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEML 152

Query: 225 YDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGI 284
             LLG P  V  I+  F T    G+     +  P      T  +G N + +  L  R G 
Sbjct: 153 TALLG-PQRVDAIVNAFSTDPLAGLAAPEDHLLP-----VTEFIGGNADALDYLTVRTGS 206

Query: 285 TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
              D    F +G+MFW R EAL P+ +  L           +DG + HA+ER   L+V  
Sbjct: 207 DAPDTNSLFASGSMFWARLEALRPLLDAHLHASEFESEQGQIDGTLAHAIERFVGLAVTH 266

Query: 345 ANFRISDVDCILGYRKSLSQ 364
           +  R++ V+  LG  K+ S 
Sbjct: 267 SGHRVTTVEQTLGITKTPSA 286


>gi|310829395|ref|YP_003961752.1| hypothetical protein ELI_3842 [Eubacterium limosum KIST612]
 gi|308741129|gb|ADO38789.1| hypothetical protein ELI_3842 [Eubacterium limosum KIST612]
          Length = 627

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 71/280 (25%), Positives = 110/280 (39%), Gaps = 8/280 (2%)

Query: 75  SNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIA 134
           +NL                  QL +   S       +I  + +IA + HLY+ DL  E  
Sbjct: 270 TNLIWQNILRTMHQADFKRALQLNYILSSEFSYDSKKILCEKRIAAIFHLYFEDLIDETY 329

Query: 135 NLLSNLSISFDLHVTLVTE-SASIKSEILKIFPAA--RIHIMENHGRDVLPFLILLETEQ 191
             LS++    D+++T  TE    +  E  K F     ++ +++N GRDV   L+  +   
Sbjct: 330 RYLSSMPEEADIYITTDTEPKKKLIQEKFKDFSCRNFKVILIQNRGRDVSALLVATKA-F 388

Query: 192 LSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIG 251
           + NYDYVC  H KK  +       G  +    F + L     V  II  F+ +  +GM+ 
Sbjct: 389 IMNYDYVCFAHDKKVTQTKPYSI-GGAFAYKCFENTLQNKNFVLNIINAFEKNPRLGMLM 447

Query: 252 SRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK---LDFFAGTMFWVRTEALDP 308
                    Y         N E+   L   +GI              GTMFW R +AL  
Sbjct: 448 PAPPNNGPYYPTLGNEWMCNYEVTKNLIDELGIKVPMDPGKEPISPLGTMFWFRPKALKV 507

Query: 309 IKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
           + +        P+    +DG + HA+ER + L V+   F 
Sbjct: 508 LFDKNWEYSDFPEEPNKVDGTLLHAIERAYGLIVQSEGFY 547


>gi|160894491|ref|ZP_02075267.1| hypothetical protein CLOL250_02043 [Clostridium sp. L2-50]
 gi|156863802|gb|EDO57233.1| hypothetical protein CLOL250_02043 [Clostridium sp. L2-50]
          Length = 646

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 8/249 (3%)

Query: 106 MGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKI 164
             K+ +I  K K+A+V+HLY+ DL  +     SN+    D+++T  T E      ++ K 
Sbjct: 303 QNKMDEILKKRKLALVMHLYFPDLVEDSFQWASNVPKETDVYITTDTVEKKEAILKVFKN 362

Query: 165 FPA--ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRW 222
            P     + ++ N GRDV   L+ ++ + + NYDY C +H KK+ +       GD +   
Sbjct: 363 LPCNHLEVRVIVNRGRDVSSILVGVK-DVIQNYDYACFVHDKKTAQAK-PGSVGDSFGYK 420

Query: 223 LFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRM 282
            + + L     V  +++TF+ +  +G++      +   Y       G N E    +A ++
Sbjct: 421 CWNNTLYNKEFVCNVLQTFEDNERLGILSPPEPNHGPFYQTLGNEWGCNFEKSREVADKL 480

Query: 283 GITFQ---DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
           GIT     D++     GT FW R  AL  + +        P+     DG I HA+ER + 
Sbjct: 481 GITIPMSEDKEALAPYGTFFWFRPTALKVLFDHDWQYEEFPEEPNNFDGTILHAIERLYP 540

Query: 340 LSVKKANFR 348
           + V++A + 
Sbjct: 541 ICVQQAGYY 549


>gi|21109952|gb|AAM38419.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 296

 Score =  265 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 11/247 (4%)

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMENHG 177
            +V+H +Y+D+  E  + +++  +S  L VT   T    ++  + +    A++   EN G
Sbjct: 50  CVVLHAWYLDVLDEALDAIADCGLSLRLVVTTDITMVEQVRQRLQQRGVQAQVDGFENRG 109

Query: 178 RDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKI 237
           RD+LPFL +           V K+H KKS  +     +GD WRR +F  LL  P     I
Sbjct: 110 RDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE----DGDAWRREMFSALL-TPQHADAI 164

Query: 238 IRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGT 297
           +R F     +G+     +  P      T  +G N + +  LA R G    D+   F +G+
Sbjct: 165 MRGFTDDPLLGLAAPAQHLLP-----VTDFIGGNADALDYLAVRTGTDAIDEHSVFASGS 219

Query: 298 MFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILG 357
           MFWV+ EAL P+ +  L           +DG + HA+ER  +++V      ++ +D +LG
Sbjct: 220 MFWVKLEALRPLLDANLHPSEFENEQGQIDGTLAHAIERFLAVAVSHCGHHVATIDQLLG 279

Query: 358 YRKSLSQ 364
             +  + 
Sbjct: 280 IPQPTAS 286


>gi|260890973|ref|ZP_05902236.1| conserved hypothetical protein [Leptotrichia hofstadii F0254]
 gi|260859000|gb|EEX73500.1| conserved hypothetical protein [Leptotrichia hofstadii F0254]
          Length = 319

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 8/243 (3%)

Query: 112 IAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKI---FPAA 168
           I +K K+ ++ H+Y+ DL  E  + + ++  + DL +T   +    K E       F   
Sbjct: 2   IYLKYKVLLIFHIYFEDLLDESIHYMKSMPETSDLLITTPRKELKEKIEEKVRGLNFRNI 61

Query: 169 RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
            + ++EN GRDV   L+  + + + NYDYVC +H KK+ +    +  G  +R   + + L
Sbjct: 62  EVRVIENRGRDVSSLLVGAK-DAVMNYDYVCFMHDKKTAQLK-PYSSGQGFRYKCYENNL 119

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD 288
                V  +I TF  +  +GM+      + N +         N +    L  ++G+    
Sbjct: 120 ATKKYVKNLIGTFKENPRLGMLMPPPPNHGNFFHIIGNEWSSNFKKTEKLIKKLGLNVDF 179

Query: 289 Q---KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345
               +     GTMFW R  AL  + +        P+     DG I HAVER +  +V+ A
Sbjct: 180 HWNLEPISPLGTMFWFRPRALKKLFDYGWEYSDFPEEPNEHDGTILHAVERVYGFAVQDA 239

Query: 346 NFR 348
            + 
Sbjct: 240 GYY 242


>gi|77747764|ref|NP_636021.2| hypothetical protein XCC0629 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|77761299|ref|YP_244667.2| hypothetical protein XC_3605 [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 546

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 11/260 (4%)

Query: 106 MGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKI 164
              V          +V+H +Y+D+  E+ + +        + +T   T+   +   I + 
Sbjct: 287 APDVATEICSPSACVVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRR 346

Query: 165 FPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLF 224
              A +   EN GRD+LPFL +       N   V K+H KKS  +     +G+ WR  + 
Sbjct: 347 GIQAEVEGFENRGRDILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEML 402

Query: 225 YDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGI 284
             LLG P  V  I+  F T    G+     +  P      T  +G N + +  L  R G 
Sbjct: 403 TALLG-PQRVDAIVNAFSTDPLAGLAAPEDHLLP-----VTEFIGGNADALDYLTVRTGS 456

Query: 285 TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
              D    F +G+MFW R EAL P+ +  L           +DG + HA+ER   L+V  
Sbjct: 457 DAPDTNSLFASGSMFWARLEALRPLLDAHLHASEFESEQGQIDGTLAHAIERFVGLAVTH 516

Query: 345 ANFRISDVDCILGYRKSLSQ 364
           +  R++ V+  LG  K+ S 
Sbjct: 517 SGHRVTTVEQTLGITKTPSA 536


>gi|312133752|ref|YP_004001091.1| protein [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773032|gb|ADQ02520.1| Hypothetical protein BBMN68_1493 [Bifidobacterium longum subsp.
           longum BBMN68]
          Length = 651

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 11/272 (4%)

Query: 90  RIHHFPQLLHGWESPAMGK---VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R  +   ++       +              +A+V HLYYIDL       +S++    D+
Sbjct: 280 RTINLADVVKTLHLNYVLPQDHTSYEPNPKHVALVFHLYYIDLLDSSLQYISSMPEGCDV 339

Query: 147 HVTLVTESAS-IKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
            +T+ +E  + I  E  +  P    + ++EN GRDV   L+    + L NYD VC  H K
Sbjct: 340 IITVGSEEKACIVKERCEGMPYNIDVRVIENRGRDVSALLVGAGKDVL-NYDLVCFAHDK 398

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +       GD +    F ++L +   V  II  F+    +G++      + N +  +
Sbjct: 399 KVTQIK-PLSVGDGFAYKCFENILASKAYVANIIDQFEREPHLGVLMPNPPEHGNYFPVF 457

Query: 265 TCSLGKNREMICTLAGRMGITFQDQKLD---FFAGTMFWVRTEAL-DPIKNLRLSRYFEP 320
           T S G N +    L   +  T    K        GTMFW R +AL D + N        P
Sbjct: 458 TLSWGDNFDGTVQLLRDIHKTVPLDKKKEVIAPLGTMFWFRPKALSDGLLNHNWQYSDFP 517

Query: 321 KVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
           K    +DG I H +ER +    +   +    V
Sbjct: 518 KEPNKIDGTILHYIERAYCYVAQANGYYSGYV 549


>gi|84501312|ref|ZP_00999517.1| hypothetical protein OB2597_13143 [Oceanicola batsensis HTCC2597]
 gi|84390603|gb|EAQ03091.1| hypothetical protein OB2597_13143 [Oceanicola batsensis HTCC2597]
          Length = 741

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 86/328 (26%), Positives = 129/328 (39%), Gaps = 31/328 (9%)

Query: 55  YDENYVVAYGSRSG--------KKFFAQSNLYMMERELH----------FDGQRIHHFPQ 96
           +   + V +G R G           +   N  + E  L            +G+     P 
Sbjct: 49  FPMRHYVLWGERMGLEPHPDFSPGAYLGLNPDVAEAGLPPLHHFLTLGRGEGRGTRAQPV 108

Query: 97  LLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV---TE 153
                    + +      +A+ AI +HLYY DLW E +  L  L +SFDL+VTL     E
Sbjct: 109 ESLPPIRTTIPRFDPRRPRARFAIHLHLYYPDLWPEFSERLDRLDLSFDLYVTLTWRGPE 168

Query: 154 SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSW 213
           +  +   I +  P A++  + N GRD+LPFL LL       Y+ +CK+HGKKS  +    
Sbjct: 169 TEWLADIIREAHPRAQVFPVANRGRDILPFLRLLNAGAFDGYEAICKLHGKKSPHRD--- 225

Query: 214 WEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNRE 273
            +GD WRR L   +L    +    +  F    D  +  +   RY           G NR 
Sbjct: 226 -DGDAWRRHLVDGVLPGKALWTS-LSAFLADEDAALWVADGQRY-----SVRKWWGSNRA 278

Query: 274 MICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
               L  R+ +   D   DF AG+M+W++   L  I+ L L+           DG + HA
Sbjct: 279 RTDALLRRVELDRSDTDFDFPAGSMYWMKPLLLGMIRALDLTEDLFEPESGQTDGTLAHA 338

Query: 334 VERCFSLSVKKANFRISDVDCILGYRKS 361
            ER      K A   +     +      
Sbjct: 339 FERAIGALAKAAGQEVRQTSELGRAVAP 366


>gi|188993121|ref|YP_001905131.1| conserved protein involved in carbohydrate biosynthesis
           [Xanthomonas campestris pv. campestris str. B100]
 gi|189030067|sp|B0RVK2|WXCX_XANCB RecName: Full=Uncharacterized protein wxcX
 gi|167734881|emb|CAP53093.1| conserved protein involved in carbohydrate biosynthesis
           [Xanthomonas campestris pv. campestris]
          Length = 695

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 11/260 (4%)

Query: 106 MGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKI 164
              V          +V+H +Y+D+  E+ + +        + +T   T+   +   I + 
Sbjct: 436 APDVATEICSPSACVVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRR 495

Query: 165 FPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLF 224
              A +   EN GRD+LPFL +       N   V K+H KKS  +     +G+ WR  + 
Sbjct: 496 GIQAEVEGFENRGRDILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEML 551

Query: 225 YDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGI 284
             LLG P  V  I+  F T   +G+     +  P      T  +G N + +  L  R G 
Sbjct: 552 TALLG-PQRVDAIVNAFSTDPLVGLAAPEDHLLP-----VTEFIGGNADALDYLTVRTGS 605

Query: 285 TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
              D    F +G+MFW R EAL P+ +  L           +DG + HA+ER   L+V  
Sbjct: 606 DAPDTNSLFASGSMFWARLEALRPLLDAHLHASEFESEQGQIDGTLAHAIERFVGLAVTH 665

Query: 345 ANFRISDVDCILGYRKSLSQ 364
           +  R++ V+  LG  K+ S 
Sbjct: 666 SGHRVTTVEQTLGITKTPSA 685


>gi|227497960|ref|ZP_03928140.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226832618|gb|EEH65001.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 626

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 10/267 (3%)

Query: 90  RIHHFPQLLHGWESPAMGKVMQIAIKA---KIAIVVHLYYIDLWIEIANLLSNLSISFDL 146
           R ++   L+   E   +     +A++    KIA+V+H+Y++DL  ++ +  +++    DL
Sbjct: 278 RTNNLADLVKNLELTYILPTQAVAVQPEESKIALVMHVYHMDLLPQLLHYAASMPAGCDL 337

Query: 147 HVTLVTESA--SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
             T+ TE+    ++     +       ++EN GRDV   L+     +L +YD VC IH K
Sbjct: 338 IATVDTEAKAQQVREATAGLSLNVETILIENRGRDVAALLVGARP-RLLDYDLVCFIHDK 396

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
           K  +       G+ + +  F ++L  P  V  +I TF     +G++   A  + + +   
Sbjct: 397 KVTQI-RPGSVGEGFAKRCFENVLATPEFVCNVIATFQAEPRLGVLTPSAPHHGDYFPIS 455

Query: 265 TCSLGKNREMICTLAGRMGITFQ---DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPK 321
             S G N +    L    G+      D++     G++FW R +A+ P+   +      P 
Sbjct: 456 AFSWGPNDKNTKELLASFGLHAPIDPDKEAIAPFGSVFWFRPQAIRPLLERKWRYDDFPA 515

Query: 322 VHKALDGEIEHAVERCFSLSVKKANFR 348
               +DG I HA+ER +    +   + 
Sbjct: 516 EPLPIDGTISHAIERVYCYMAQARGYY 542


>gi|323138318|ref|ZP_08073389.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
 gi|322396401|gb|EFX98931.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
          Length = 754

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 20/308 (6%)

Query: 56  DENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFP------QLLHGWESPAMGKV 109
              + V +G   G+     +  Y     L   G      P            E P     
Sbjct: 304 PLVHYVKFGRAEGRDATPPTPDYTYTYALSDPGPIPDVVPARRPINDHDFALEVPFHY-A 362

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKIFPA- 167
             I +   +A +VH +Y DL   I   L N+  + DL+++  + E A I  ++++ +   
Sbjct: 363 PDINMDKPVAAIVHAFYPDLLEHILGYLENIPCAVDLYISTDSAEKAEIIGKVVRNWSKG 422

Query: 168 -ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYD 226
              + IMEN GRD+ P ++    +  + +D    +H K+S   G   +    WR +L   
Sbjct: 423 STDVRIMENRGRDIAPMIVGFR-DVFAKHDIFLHVHTKRSPHAGDLLYH---WRDYLLNT 478

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
           L G   +   ++  F     IG++  + +    +      + G + ++   L  R+G+  
Sbjct: 479 LFGTGDIARSVLSLF-NDPKIGVVFPQHFFEVRR----MLNWGFDYDLARNLLARVGVQL 533

Query: 287 Q-DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345
             D  L+F +G+MFW RT+A+ P+ +L L     P+    +DG + HA+ER   +  +  
Sbjct: 534 NKDLVLEFPSGSMFWGRTDAIRPLLDLDLQFSDFPEEAGQIDGTLAHAIERTLLMVAESK 593

Query: 346 NFRISDVD 353
            +    V 
Sbjct: 594 GYEWFKVA 601


>gi|90425670|ref|YP_534040.1| glycosyl transferase, group 1 [Rhodopseudomonas palustris BisB18]
 gi|90107684|gb|ABD89721.1| glycosyl transferase, group 1 [Rhodopseudomonas palustris BisB18]
          Length = 846

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 80/273 (29%), Positives = 119/273 (43%), Gaps = 18/273 (6%)

Query: 85  HFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISF 144
           HF         +  H    P   +    A + +IAI  H YY DL      L++  + S 
Sbjct: 566 HFLRNGRPE-GRWTHRVIRPEPRR-ESNAARPRIAIHGHFYYPDLLESFLKLIAANASSV 623

Query: 145 DLHVTLV-TESASIKSEILKIF--PAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKI 201
           DL +T    E A+   + L+ F    A +  + N GRD+ PFL  +  ++L +YD V   
Sbjct: 624 DLFLTTSGPEQAAQIRKSLRAFGIQNADVWSVPNRGRDIGPFLKEMP-DKLGSYDIVGHF 682

Query: 202 HGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIR-TFDTHRDIGMIGSRAYRYPNK 260
           HGK+SK        GD WR + +  L+G    +  +I   F     +G++ +        
Sbjct: 683 HGKRSKHVD--STVGDQWRDFAWQHLIGDAFPMIDVIADAFAEDAKLGLVFAEDP----- 735

Query: 261 YCDYTCSLGKNREMICTLAGRMGITFQ-DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFE 319
              Y     +NR++   LA RM I     +  DF  GTMFW R  AL P+  L L     
Sbjct: 736 ---YLNGWDENRDLAERLAQRMKIEAPLPEHFDFPIGTMFWARVAALQPLFQLNLDWNDY 792

Query: 320 PKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
           P     +DG I HA+ER    +V+K+ F  +  
Sbjct: 793 PHEPLPIDGTILHALERIVPFAVQKSGFEYATT 825


>gi|190572676|ref|YP_001970521.1| putative glycosyltransferase, fusion protein [Stenotrophomonas
           maltophilia K279a]
 gi|190010598|emb|CAQ44207.1| putative glycosyltransferase, fusion protein [Stenotrophomonas
           maltophilia K279a]
          Length = 566

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 85/285 (29%), Positives = 123/285 (43%), Gaps = 20/285 (7%)

Query: 79  MMERELHFDGQRIHHFPQLL---------HGWESPAMGKVMQIAIKAKIAIVVHLYYIDL 129
            +E E+        +   LL            +   +G +    +K++ AIV+HLY++DL
Sbjct: 269 QVEEEVARMRATRVNAMPLLAQSSDGISQEELQRYGVGAIPADKLKSRFAIVLHLYHLDL 328

Query: 130 WIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKIFPAARIHIMENHGRDVLPFLILL 187
              I   + N+ +  DL V++ +  +         +    A + +  N GRDV PF+ LL
Sbjct: 329 IESIQGYMKNMIVDHDLFVSVKSVADRRVAVRFFEERKVRAFVFVHPNIGRDVGPFVSLL 388

Query: 188 ETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDI 247
            T  L  YD VCKIH KKS         G  WR  L   LLG+   V KI+R F      
Sbjct: 389 NTGLLDRYDAVCKIHSKKSVYHDG----GGQWRDELMKSLLGSSHTVLKILRAFRHDSSC 444

Query: 248 GMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALD 307
           G++G         Y       G N E +  LA   GI     +L FFAGTMFW R  AL 
Sbjct: 445 GIVGPEH-----AYVSNARFWGGNEERLRRLAAETGIDDARIRLGFFAGTMFWFRPAALY 499

Query: 308 PIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
            ++   L+          LD  + H +ER F L V++A +  +  
Sbjct: 500 ALRERALALSEFDPEAGQLDATLAHVIERLFVLWVEQAGYFAATT 544


>gi|189030068|sp|P0C7J1|WXCX_XANCP RecName: Full=Uncharacterized protein wxcX
          Length = 695

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 11/260 (4%)

Query: 106 MGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKI 164
              V          +V+H +Y+D+  E+ + +        + +T   T+   +   I + 
Sbjct: 436 APDVATEICSPSACVVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRR 495

Query: 165 FPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLF 224
              A +   EN GRD+LPFL +       N   V K+H KKS  +     +G+ WR  + 
Sbjct: 496 GIQAEVEGFENRGRDILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEML 551

Query: 225 YDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGI 284
             LLG P  V  I+  F T    G+     +  P      T  +G N + +  L  R G 
Sbjct: 552 TALLG-PQRVDAIVNAFSTDPLAGLAAPEDHLLP-----VTEFIGGNADALDYLTVRTGS 605

Query: 285 TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
              D    F +G+MFW R EAL P+ +  L           +DG + HA+ER   L+V  
Sbjct: 606 DAPDTNSLFASGSMFWARLEALRPLLDAHLHASEFESEQGQIDGTLAHAIERFVGLAVTH 665

Query: 345 ANFRISDVDCILGYRKSLSQ 364
           +  R++ V+  LG  K+ S 
Sbjct: 666 SGHRVTTVEQTLGITKTPSA 685


>gi|122879048|ref|YP_199439.6| hypothetical protein XOO0800 [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 546

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILK 163
              +V+  + +    +V+H +Y+D+  E  + L++  +S  L VT   T    ++  + +
Sbjct: 286 HTAEVVTRSGQHDACVVLHAWYLDVLDEALDALAHCGLSLRLVVTTDITMVTQVRQCLQQ 345

Query: 164 IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWL 223
               A++   EN GRD+LPFL +           V K+H KKS  +     +GD WRR +
Sbjct: 346 RGLQAQVEGFENRGRDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE----DGDTWRRDM 401

Query: 224 FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
              LL AP  V  I+R F     +G++    +  P      T  +G N + +  L  R G
Sbjct: 402 LSGLL-APQHVAAIVRGFAEDPLLGLVAPAQHLLP-----VTDFMGGNADALDYLTVRTG 455

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
               +    F +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V 
Sbjct: 456 TDAINAHSLFASGSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFLAVAVA 515

Query: 344 KANFRISDVDCILGYRKSLSQ 364
            +  R++ ++ +LG  +  + 
Sbjct: 516 HSGQRVATIEQLLGIPQPATA 536


>gi|260890969|ref|ZP_05902232.1| O-antigen export system ATP-binding protein RfbB [Leptotrichia
           hofstadii F0254]
 gi|260859295|gb|EEX73795.1| O-antigen export system ATP-binding protein RfbB [Leptotrichia
           hofstadii F0254]
          Length = 709

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 8/241 (3%)

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKI---FPAARI 170
            + K+ ++ H+Y+ DL  E  + + ++  + DL +T   +    K E       F    +
Sbjct: 149 SEDKVLLIFHIYFEDLLDESIHYMKSMPETSDLLITTPRKELKEKIEEKVRGLNFRNIEV 208

Query: 171 HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGA 230
            ++EN GRDV   L+  + + + NYDYVC +H KK+ +        D++  +     L  
Sbjct: 209 RVIENRGRDVSSLLVGAK-DAVMNYDYVCFMHDKKTAQLKPYSSLNDVYINYC-KGTLAT 266

Query: 231 PGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ- 289
              V  +I TF  +  +GM+      + N +         N +    L  ++G+      
Sbjct: 267 KKYVKNLIGTFKENPRLGMLMPPPPNHGNFFHIIGNEWSSNFKKTEKLIKKLGLNVDFHW 326

Query: 290 --KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
             +     GTMFW R  AL  + +        P+     DG I HAVER +   V+ A +
Sbjct: 327 NLEPISPLGTMFWFRPRALKKLFDYGWEYSDFPEEPNEHDGTILHAVERVYGFVVQDAGY 386

Query: 348 R 348
            
Sbjct: 387 Y 387


>gi|166713445|ref|ZP_02244652.1| hypothetical protein Xoryp_18900 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 695

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILK 163
              +V+  + +    +V+H +Y+D+  E  + L++  +S  L VT   T    ++  + +
Sbjct: 435 HTAEVVTRSGQHDACVVLHAWYLDVLDEALDALAHCGLSLRLVVTTDITMVTQVRQCLQQ 494

Query: 164 IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWL 223
               A++   EN GRD+LPFL +           V K+H KKS  +     +GD WRR +
Sbjct: 495 RGLQAQVEGFENRGRDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE----DGDTWRRDM 550

Query: 224 FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
              LL AP  V  I+R F     +G++    +  P      T  +G N + +  L  R G
Sbjct: 551 LSGLL-APQHVAAIVRGFAEDPLLGLVAPAQHLLP-----VTDFIGGNADALDYLTVRTG 604

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
               +    F +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V 
Sbjct: 605 TDAINAHSLFASGSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFLAVAVA 664

Query: 344 KANFRISDVDCILGYRKSLSQ 364
            +  R++ ++ +LG  K  + 
Sbjct: 665 HSGQRVATIEQLLGIPKPATA 685


>gi|325921211|ref|ZP_08183074.1| lipopolysaccharide biosynthesis protein [Xanthomonas gardneri ATCC
           19865]
 gi|325548310|gb|EGD19301.1| lipopolysaccharide biosynthesis protein [Xanthomonas gardneri ATCC
           19865]
          Length = 706

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 11/255 (4%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILK 163
              KV+      ++ +V+H +Y+D+  E+ + +++ +IS  L +T   T    ++  + +
Sbjct: 428 GPSKVVSELAPHRVCVVLHAWYLDVLDEMLDAVAHCAISPRLVITTDLTMVVEVRHRVQQ 487

Query: 164 IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWL 223
               A +   EN GRD+LPFL +           V K+H KKS  +     +GD WR  +
Sbjct: 488 RGMQAEVEGFENRGRDILPFLHVANRLLDEGVCLVVKLHTKKSTHRS----DGDTWRHEM 543

Query: 224 FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
              LL AP     I+  F +   +G+     +  P         +G N + +  L  R G
Sbjct: 544 LSALL-APERADAIVNAFSSDPLLGLAAPDGHLLP-----VADFIGGNTDALDYLGARTG 597

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
                ++  F +G+MFW R EAL P+ +  L           +DG + HA+ER   +S  
Sbjct: 598 TETAIEQGMFASGSMFWARLEALRPLLDAHLHPSEFETEQGQIDGTLAHAIERFMGISAI 657

Query: 344 KANFRISDVDCILGY 358
           ++ +RI+ +   L  
Sbjct: 658 QSGYRIATIGQALEI 672


>gi|310816773|ref|YP_003964737.1| lipopolysaccharide biosynthesis protein-like protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755508|gb|ADO43437.1| lipopolysaccharide biosynthesis protein-like protein
           [Ketogulonicigenium vulgare Y25]
          Length = 726

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 22/268 (8%)

Query: 89  QRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHV 148
           +       L    E+PA  +         I + +HLYY +L    A  L+ + +   L+V
Sbjct: 446 ETRKRHLVLQPRREAPAPARP--------IGVFLHLYYQELAPVFAKRLAQIPLPLSLYV 497

Query: 149 TLVTESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
           +  T  A   ++I +  P A++ ++ N GRD+ P L     +  +++D V  +HGKKS  
Sbjct: 498 STDT--AEKAAQIERALPQAQVRVLPNRGRDIFPKLYGF-GDAYADHDIVLHLHGKKSLH 554

Query: 209 KGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL 268
                   D W   +   LLG P  V +I+  FD+   +G++    +R            
Sbjct: 555 SSML----DEWLSHILDCLLGDPADVNRILSLFDSVPRLGIVMPVVHRS----VLNAAHW 606

Query: 269 GKNREMICTLAGRMGIT---FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKA 325
           G NR++   LA RMG+     ++  L F AG+MFW RT AL PI +L L     P     
Sbjct: 607 GFNRDIGAELAYRMGMATPLPENDALQFPAGSMFWARTAALQPILDLALEASHFPPEAGQ 666

Query: 326 LDGEIEHAVERCFSLSVKKANFRISDVD 353
           +DG + HAVER   +  +   + +  V 
Sbjct: 667 VDGTLAHAVERMLGVVCRAGGYYMLPVA 694


>gi|84622385|ref|YP_449757.1| hypothetical protein XOO_0728 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188578640|ref|YP_001915569.1| hypothetical protein PXO_03177 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|84366325|dbj|BAE67483.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188523092|gb|ACD61037.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 695

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILK 163
              +V+  + +    +V+H +Y+D+  E  + L++  +S  L VT   T    ++  + +
Sbjct: 435 HTAEVVTRSGQHDACVVLHAWYLDVLDEALDALAHCGLSLRLVVTTDITMVTQVRQCLQQ 494

Query: 164 IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWL 223
               A++   EN GRD+LPFL +           V K+H KKS  +     +GD WRR +
Sbjct: 495 RGLQAQVEGFENRGRDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE----DGDTWRRDM 550

Query: 224 FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
              LL AP  V  I+R F     +G++    +  P      T  +G N + +  L  R G
Sbjct: 551 LSGLL-APQHVAAIVRGFAEDPLLGLVAPAQHLLP-----VTDFMGGNADALDYLTVRTG 604

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
               +    F +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V 
Sbjct: 605 TDAINAHSLFASGSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFLAVAVA 664

Query: 344 KANFRISDVDCILGYRKSLSQ 364
            +  R++ ++ +LG  +  + 
Sbjct: 665 HSGQRVATIEQLLGIPQPATA 685


>gi|58425017|gb|AAW74054.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 727

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILK 163
              +V+  + +    +V+H +Y+D+  E  + L++  +S  L VT   T    ++  + +
Sbjct: 467 HTAEVVTRSGQHDACVVLHAWYLDVLDEALDALAHCGLSLRLVVTTDITMVTQVRQCLQQ 526

Query: 164 IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWL 223
               A++   EN GRD+LPFL +           V K+H KKS  +     +GD WRR +
Sbjct: 527 RGLQAQVEGFENRGRDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE----DGDTWRRDM 582

Query: 224 FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
              LL AP  V  I+R F     +G++    +  P      T  +G N + +  L  R G
Sbjct: 583 LSGLL-APQHVAAIVRGFAEDPLLGLVAPAQHLLP-----VTDFMGGNADALDYLTVRTG 636

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
               +    F +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V 
Sbjct: 637 TDAINAHSLFASGSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFLAVAVA 696

Query: 344 KANFRISDVDCILGYRKSLSQ 364
            +  R++ ++ +LG  +  + 
Sbjct: 697 HSGQRVATIEQLLGIPQPATA 717


>gi|77748730|ref|NP_643883.2| hypothetical protein XAC3576 [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 546

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 11/247 (4%)

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMENHG 177
            +V+H +Y+D+  E  + +++  +S  L VT   T    ++  + +    A++   EN G
Sbjct: 300 CVVLHAWYLDVLDEALDAIADCGLSLRLVVTTDITMVEQVRQRLQQRGVQAQVDGFENRG 359

Query: 178 RDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKI 237
           RD+LPFL +           V K+H KKS  +     +GD WRR +F  LL  P     I
Sbjct: 360 RDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE----DGDAWRREMFSALL-TPQHADAI 414

Query: 238 IRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGT 297
           +R F     +G+     +  P      T  +G N + +  LA R G    D+   F +G+
Sbjct: 415 MRGFTDDPLLGLAAPAQHLLP-----VTDFIGGNADALDYLAVRTGTDAIDEHSVFASGS 469

Query: 298 MFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILG 357
           MFWV+ EAL P+ +  L           +DG + HA+ER  +++V      ++ +D +LG
Sbjct: 470 MFWVKLEALRPLLDANLHPSEFENEQGQIDGTLAHAIERFLAVAVSHCGHHVATIDQLLG 529

Query: 358 YRKSLSQ 364
             +  + 
Sbjct: 530 IPQPTAS 536


>gi|325928558|ref|ZP_08189746.1| Lipopolysaccharide biosynthesis protein/putative glycosyl
           transferase [Xanthomonas perforans 91-118]
 gi|325541097|gb|EGD12651.1| Lipopolysaccharide biosynthesis protein/putative glycosyl
           transferase [Xanthomonas perforans 91-118]
          Length = 695

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 11/253 (4%)

Query: 113 AIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIH 171
           + +  + +V+H +Y+D+  E    +++  +S  L +T   T    ++  + +    A++ 
Sbjct: 443 SDQRDVCVVLHAWYLDVLDEALEAIAHCGLSLRLVITTDITMVEQVRQRLQQRGVQAQVE 502

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
             EN GRD+LPFL +           V K+H KKS  +     +GD WRR +F  LL AP
Sbjct: 503 GFENRGRDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE----DGDTWRREMFSALL-AP 557

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKL 291
             V  I+R F     +G+     +  P      T  +G N + +  LA R G    ++  
Sbjct: 558 QHVDAIMRGFADDPLLGLAAPAQHLLP-----VTDFIGGNADALDYLAVRTGTDAINEHS 612

Query: 292 DFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISD 351
            F +G+MFWV+ EAL P+ +  L           +DG + HA+ER  +++V      ++ 
Sbjct: 613 MFASGSMFWVKLEALRPLLDAHLHPSEFEDEQGQIDGTLAHAIERFLAVAVGHCGHHVAT 672

Query: 352 VDCILGYRKSLSQ 364
           V+ +LG  +  + 
Sbjct: 673 VEQLLGIAQPTAT 685


>gi|82703518|ref|YP_413084.1| glycosyl transferase, group 1 [Nitrosospira multiformis ATCC 25196]
 gi|82411583|gb|ABB75692.1| Glycosyl transferase, group 1 [Nitrosospira multiformis ATCC 25196]
          Length = 828

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 13/245 (5%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE-SASIKSEILK 163
           +      ++   ++A+ +H+YY +L+ EI   L   ++  DL +++ TE + +  + +L 
Sbjct: 579 SEEAARPLSSSIRVALHLHVYYSELFPEIMARLKVNNVRPDLFISVPTECTRNEVTGLLN 638

Query: 164 IFPA--ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRR 221
            +P     I I+ N GRD+ P L    +  L +YD +  +H KK+         G  W  
Sbjct: 639 DYPGKVVDIQIVPNRGRDIGPLLTAFGSVFLDDYDAIGHLHTKKTADLSDEMI-GKRWYT 697

Query: 222 WLFYDLLGAPGVVFKII-RTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAG 280
           +L  +LLG    +  II         IG++             +    G N+    +LA 
Sbjct: 698 FLLENLLGGKRNMADIILGRMTADPAIGIVFPDDP--------HVFDWGNNKAHADSLAS 749

Query: 281 RMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSL 340
           ++G+    +   F  GTMFW RTEAL P+  L LS    P      DG I HA+ER   L
Sbjct: 750 KLGLGKLQENFVFPMGTMFWARTEALRPLFTLDLSWQDYPAEPLPYDGTILHALERLLPL 809

Query: 341 SVKKA 345
              K 
Sbjct: 810 IAAKQ 814


>gi|3399709|dbj|BAA32094.1| rgpFc [Streptococcus mutans]
          Length = 583

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 21/276 (7%)

Query: 93  HFPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           ++P   +      + K  ++ +K  K+A+ +H++Y+DL  E          S+DL +T  
Sbjct: 260 NYPDFSYLLGHKYVKKRERVDLKNQKVAVHLHVFYVDLLEEFLTAFKQFHFSYDLFITTD 319

Query: 152 TE--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
           ++   A I+  +      A++ +  N GRDVLP L L     LS YD+V   H KKSK  
Sbjct: 320 SDDKKAEIEEILSANGQEAQVFVTGNIGRDVLPMLKL--KNYLSAYDFVGHFHTKKSKEA 377

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            +  W G  WR  L   L+        I+     +  IG++ +    +  +Y     +  
Sbjct: 378 DF--WAGQSWREELIDMLVKPAD---NILAQLQQNPKIGLVIADMPTF-FRYNKIVDAWN 431

Query: 270 KN--REMICTLAGRMGITFQDQKLDF-----FAGTMFWVRTEALDPIKNLRLSRYFEPKV 322
           ++     + TL  +MG+T +     F       GT  W + +AL P+ +L L+    P+ 
Sbjct: 432 EHLIAPEMNTLWQKMGMTKKIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPEE 491

Query: 323 HKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                  I HA+ER        +  +FRIS     L
Sbjct: 492 PLP-QNSILHAIERLLIYIAWNEHYDFRISKNPVDL 526


>gi|290580710|ref|YP_003485102.1| rhamnan synthesis protein F [Streptococcus mutans NN2025]
 gi|254997609|dbj|BAH88210.1| RgpFc protein [Streptococcus mutans NN2025]
          Length = 557

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 21/276 (7%)

Query: 93  HFPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           ++P   +      + K  ++ +K  K+A+ +H++Y+DL  E          S+DL +T  
Sbjct: 234 NYPDFSYLLGHKYVKKRERVDLKNQKVAVHLHVFYVDLLEEFLTAFKQFHFSYDLFITTD 293

Query: 152 TE--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
           ++   A I+  +      A++ +  N GRDVLP L L     LS YD+V   H KKSK  
Sbjct: 294 SDDKKAEIEEILSANSQEAQVFVTGNIGRDVLPMLKL--KNYLSAYDFVGHFHTKKSKEA 351

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            +  W G  WR  L   L+        I+     +  IG++ +    +  +Y     +  
Sbjct: 352 DF--WAGQSWREELIDMLVKPAD---NILAQLQQNPKIGLVIADMPTF-FRYNKIVDAWN 405

Query: 270 KN--REMICTLAGRMGITFQDQKLDF-----FAGTMFWVRTEALDPIKNLRLSRYFEPKV 322
           ++     + TL  +MG+T +     F       GT  W + +AL P+ +L L+    P+ 
Sbjct: 406 EHLIAPEMNTLWQKMGMTKKIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPEE 465

Query: 323 HKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                  I HA+ER        +  +FRIS     L
Sbjct: 466 PLP-QNSILHAIERLLIYIAWNEHYDFRISKNPVDL 500


>gi|325915787|ref|ZP_08178089.1| Putative glycosyltransferase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538051|gb|EGD09745.1| Putative glycosyltransferase [Xanthomonas vesicatoria ATCC 35937]
          Length = 695

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 11/257 (4%)

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAA 168
           +      +  +VVH +Y+D+  EI + L+       L VT   T    ++  + +    A
Sbjct: 440 VPAPRTYRACVVVHAWYLDVLDEILDALAPSVAMLRLIVTTDLTLVGQVRGRLQQHGIEA 499

Query: 169 RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
            +   EN GRD+LPFL +           V K+H KKS  +     +GD WRR +   LL
Sbjct: 500 EVEGFENRGRDILPFLHIANRLLDEGEQLVVKLHTKKSTHRH----DGDAWRREMLAALL 555

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD 288
           G  G V  I+  F     +G+     +         T  +G N + +  LA R G     
Sbjct: 556 GG-GRVDAIVNAFVADPQLGLAAPAQHLLA-----VTDFIGGNADALDYLAVRTGTGTVT 609

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
           +   F +G+MFW + +AL P+ +  L           +DG + HA+ER    +V  +  R
Sbjct: 610 EHDRFASGSMFWAKLDALRPLLDAHLQPGDFEGEQGQIDGTLAHAIERFLGHAVLHSGHR 669

Query: 349 ISDVDCILGYRKSLSQN 365
           I+ +D ++G R+  +  
Sbjct: 670 IATIDGLMGQREPAAST 686


>gi|30024644|dbj|BAC75698.1| rhamnosyltransferase [Streptococcus mutans]
          Length = 583

 Score =  255 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 21/276 (7%)

Query: 93  HFPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           ++P   +      + K  ++ +K  K+A+ +H++Y+DL  E          S+DL +T  
Sbjct: 260 NYPDFSYLLGHKYVKKRERVDLKNQKVAVHLHVFYVDLLEEFLTAFKQFHFSYDLFITTD 319

Query: 152 TE--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
           ++   A I+  +      A++ +  N GRDVLP L L     LS YD+V   H KKSK  
Sbjct: 320 SDDKKAEIEEILSANSQEAQVFVTGNIGRDVLPMLKL--KNYLSTYDFVGHFHTKKSKEA 377

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            +  W G  WR  L   L+        I+     +  IG++ +    +  +Y     +  
Sbjct: 378 DF--WAGQSWREELIDMLVKPAD---NILAQLQQNPKIGLVIADMPTF-FRYNKIVDAWN 431

Query: 270 KN--REMICTLAGRMGITFQDQKLDF-----FAGTMFWVRTEALDPIKNLRLSRYFEPKV 322
           ++     + TL  +MG+T +     F       GT  W + +AL P+ +L L+    P+ 
Sbjct: 432 EHLIAPEMNTLWQKMGMTKKIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPEE 491

Query: 323 HKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                  I HA+ER        +  +FRIS     L
Sbjct: 492 PLP-QNSILHAIERLLIYIAWNEHYDFRISKNPVDL 526


>gi|30024633|dbj|BAC75688.1| rhamnosyltransferase [Streptococcus mutans]
          Length = 583

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 21/276 (7%)

Query: 93  HFPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           ++P   +      + K  ++ +K  K+A+ +H++Y+DL  E          S+DL +T  
Sbjct: 260 NYPDFSYLLGHKYVKKRERVDLKNQKVAVHLHVFYVDLLEEFLTAFKQFHFSYDLFITTD 319

Query: 152 TE--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
           ++   A I+  +      A+I +  N GRDVLP L L     LS YD+V   H KKSK  
Sbjct: 320 SDDKKAEIEEVLSANSQEAQIFVTGNIGRDVLPMLKL--KNYLSTYDFVGHFHTKKSKEA 377

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            +  W G  WR  L   L+        I+     +  IG++ +    +  +Y     +  
Sbjct: 378 DF--WAGQSWREELIDMLVKPAD---NILAQLQQNPKIGLVIADMPTF-FRYNKIVDAWN 431

Query: 270 KN--REMICTLAGRMGITFQDQKLDF-----FAGTMFWVRTEALDPIKNLRLSRYFEPKV 322
           ++     + TL  +MG+T +     F       GT  W + +AL P+ +L L+    P+ 
Sbjct: 432 EHLIAPEMNTLWQKMGMTKKIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPEE 491

Query: 323 HKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                  I HA+ER        +  +FRIS     L
Sbjct: 492 PLP-QNSILHAIERLLIYIAWNEHYDFRISKNPVDL 526


>gi|289678438|ref|ZP_06499328.1| glycosyl transferase, group 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 774

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 66/317 (20%), Positives = 118/317 (37%), Gaps = 35/317 (11%)

Query: 41  WFWTLFYKRSKKLCY-----DENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFP 95
           +F T  Y R     Y        + +  G + G+ + A                   +  
Sbjct: 204 YFDTETYHRMNTDVYHAQISPLYHYLISGRQEGRTYHA-------------------NIK 244

Query: 96  QLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA 155
           +            +   A +  +A+ +H++Y D   + ++ L+N     D+ +TL     
Sbjct: 245 KWQPNSVLDIQATLKPEAARLNVAVCLHIFYEDYIEKFSHALANFPTQVDVFITLADAKH 304

Query: 156 SIKSEIL----KIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGY 211
             K+  +          ++  + N GR+  P L+    + L  YD  C +H KKS    Y
Sbjct: 305 QKKTIAVFSKHPRVKNLKVRCVPNRGRNFGPLLVEFSKD-LMAYDLFCHLHSKKSL---Y 360

Query: 212 SWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN 271
           S  E   W  +L   LL    ++ +++  F  H+D+G+     +        +   +  N
Sbjct: 361 SGREQTQWADYLTEYLLRDANIITRLLNAFADHKDLGLYYPTTFWMM---PSWVNHVTMN 417

Query: 272 REMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIE 331
           +  +        I   D  L + AG MFW R EAL  +        F P+     DG + 
Sbjct: 418 KSFMAAWHNEWQIDPCDGFLSYPAGGMFWARPEALKDMLEKEYDYDFFPQEPLPNDGSML 477

Query: 332 HAVERCFSLSVKKANFR 348
           HA+ER   L  +K  ++
Sbjct: 478 HALERVIGLLAEKNGYK 494


>gi|24379285|ref|NP_721240.1| RgpFc protein [Streptococcus mutans UA159]
 gi|24377204|gb|AAN58546.1|AE014924_6 RgpFc protein [Streptococcus mutans UA159]
          Length = 583

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 21/276 (7%)

Query: 93  HFPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           ++P   +      + K  ++ +K  K A+ +H++Y+DL  E          S+DL +T  
Sbjct: 260 NYPDFSYLLGHKYVKKRERVDLKNQKAAVHLHVFYVDLLEEFLTAFKQFHFSYDLFITTD 319

Query: 152 TE--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
           ++   A I+  +      A++ +  N GRDVLP L L     LS YD+V   H KKSK  
Sbjct: 320 SDDKKAEIEEILSANSQEAQVFVTGNIGRDVLPMLKL--KNYLSTYDFVGHFHTKKSKEA 377

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            +  W G  WR  L   L+        I+     +  IG++ +    +  +Y     +  
Sbjct: 378 DF--WAGQSWREELIDMLVKPAD---NILAQLQQNPKIGLVIADMPTF-FRYNKIVDAWN 431

Query: 270 KN--REMICTLAGRMGITFQDQKLDF-----FAGTMFWVRTEALDPIKNLRLSRYFEPKV 322
           ++     + TL  +MG+T +     F       GT  W + +AL P+ +L L+    P+ 
Sbjct: 432 EHLIAPEMNTLWQKMGMTKKIDFNAFHTFVMSYGTFVWFKYDALKPLFDLNLTDDDVPEE 491

Query: 323 HKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                  I HA+ER        +  +FRIS     L
Sbjct: 492 PLP-QNSILHAIERLLIYIAWNEHYDFRISKNPVDL 526


>gi|259414984|ref|ZP_05738907.1| glycosyl transferase, group 1 [Silicibacter sp. TrichCH4B]
 gi|259349435|gb|EEW61182.1| glycosyl transferase, group 1 [Silicibacter sp. TrichCH4B]
          Length = 680

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/298 (26%), Positives = 128/298 (42%), Gaps = 14/298 (4%)

Query: 70  KFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDL 129
           K   +   + +    H       H   +     + A  +   I    + A+V+HLYY DL
Sbjct: 27  KSGQRPFEHFLRAGRHEQRVTREHSATIAESGSAVAPLRGAGINQNLQ-AVVIHLYYTDL 85

Query: 130 WIEIANLLSNLSISFDLHVTLVT---ESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
           W E  + L +   +FDL+VTL     E+   ++ I + +P AR+ ++ N GRD+ PFL L
Sbjct: 86  WDEFRDRLRSARFTFDLYVTLTEQGPETEETRARIAEDWPEARVLVLPNRGRDIYPFLHL 145

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L    L +Y  VCK+H KKS  +     +GD+WR  L   +L   G   +++  F    D
Sbjct: 146 LNAGWLDHYRAVCKLHSKKSPHRQ----DGDVWRTHLTEGIL-PEGETAELLERFLAAED 200

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
            G+  +    Y           G N E    L  R+ +      LDF AG+++W++   L
Sbjct: 201 CGLWVADGQHYEGARW-----WGSNLERCRNLLARLELAASADTLDFPAGSIYWLKPAIL 255

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRKSLSQ 364
           D ++ L L            DG + HA+ER   +       +I     +   + + S 
Sbjct: 256 DMLRGLALGFDDFDIEQGQTDGTLAHALERALGMICAAGGLQILQTTQLRDLQPAPSS 313


>gi|33862360|ref|NP_893920.1| glycosyltransferase [Prochlorococcus marinus str. MIT 9313]
 gi|33640473|emb|CAE20262.1| glycosyltransferase [Prochlorococcus marinus str. MIT 9313]
          Length = 738

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 65/289 (22%), Positives = 108/289 (37%), Gaps = 20/289 (6%)

Query: 70  KFFAQSNLYMMERELHFDGQRIHHFPQLLHG--WESPAMGK---VMQIAIKAKIAIVVHL 124
            F        +  +       IH+  +      W  P +     + Q   +  IA+ VH+
Sbjct: 449 GFHPGIYKEQILEDAPCPDPLIHYLKENQPKGEWNVPMITPASSLQQQDSETTIALHVHV 508

Query: 125 YYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAAR---IHIMENHGRDVL 181
           +Y +L   I N L+   I  DL ++        + +            I    N GRD+ 
Sbjct: 509 HYPELLDTILNALNYNKIRPDLFLSCTNHENHSEIQCKSAGANCTLKSIITTPNRGRDIG 568

Query: 182 PFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVV--FKIIR 239
           P L  +  E  + Y+    +H KKS        +G  WR +L  +L+G   +    +I+ 
Sbjct: 569 PLLTEIGKELDTKYEIYGHLHTKKSALL--PGKQGCSWRDFLISNLVGMQDIAMADRIVT 626

Query: 240 TFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMF 299
               +  +G++ +                  NR+    LA ++ +    +  DF  GTMF
Sbjct: 627 ALKKNPKLGLVFADDPTCVG--------WSGNRKHADILANKLNLGPLPRCFDFPVGTMF 678

Query: 300 WVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
           W +  AL  + NL L     P+     DG I HA+ER   +   K  F 
Sbjct: 679 WAKKGALTELYNLNLGWEDYPQEPLGYDGTILHAIERLLPIIAAKQGFT 727


>gi|83582737|ref|YP_425043.1| glycosyl transferase, group 1 [Rhodospirillum rubrum ATCC 11170]
 gi|83578053|gb|ABC24603.1| Glycosyl transferase, group 1 [Rhodospirillum rubrum ATCC 11170]
          Length = 1236

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 24/278 (8%)

Query: 80   MERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSN 139
            +ER     G   H    L     SP  G         K+ +  H YY+DL  +    +  
Sbjct: 959  IERGSP-KGNWTHPVIDLETSLPSPIEG--------GKVLLHGHFYYVDLIDDFLKKIII 1009

Query: 140  LSISFDLHVTLVTESASI-KSEILKIFPA--ARIHIMENHGRDVLPFLILLETEQLSNYD 196
               S DL +T   E  ++   + L+ +      + ++ N GRDV  F   L   + S+YD
Sbjct: 1010 NDFSCDLIITTTDEDRAVFLRKKLEEYKNGSVEVRVVPNIGRDVGAFFTGLSDLKNSDYD 1069

Query: 197  YVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKI-IRTFDTHRDIGMIGSRAY 255
             V  IHGKKS     S   G+ WR +L+  L+G       I +     + DIG++ +   
Sbjct: 1070 VVGHIHGKKSIHL--SDGTGNKWRNFLWEHLIGGEKKAAAIAVSALIRNPDIGLVFAEEP 1127

Query: 256  RYPNKYCDYTCSLGKNREMICTLAGRMGITFQ-DQKLDFFAGTMFWVRTEALDPIKNLRL 314
                    +     KN+E+   LA +MGI     +  D+  GTMFW + +AL+PI +L L
Sbjct: 1128 --------FLFGWDKNKELANDLAKKMGIEKSLPRFFDWPIGTMFWAKRKALEPIFDLNL 1179

Query: 315  SRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
                 P     + G + HA+ER    +V+KA F  +  
Sbjct: 1180 RWEDYPPEPIPVYGTMLHALERLLPFAVEKAGFSFATT 1217


>gi|320330331|gb|EFW86314.1| hypothetical protein PsgRace4_09215 [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 774

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 67/317 (21%), Positives = 121/317 (38%), Gaps = 35/317 (11%)

Query: 41  WFWTLFYKRSKKLCY-----DENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFP 95
           +F T  Y R     Y        + +  G + G+ + A                   +  
Sbjct: 204 YFDTETYHRMNTDVYHAQISPLYHYLISGRQEGRTYHA-------------------NVK 244

Query: 96  QLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA 155
           +            +   A +  +AI +H++Y D   + ++ L+N  I+ D+ +TL   + 
Sbjct: 245 KWQPNNVLDVQTTLKPEAARLNVAICLHIFYEDYIEKFSHALANFPIAVDVFITLAAPNH 304

Query: 156 SIKSEIL----KIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGY 211
             K+             ++  + N GR+  P L+    + L  YD  C +H KKS    Y
Sbjct: 305 KKKTIATFGQHPRVKNLKVSCVPNRGRNFGPLLVEFSKD-LMAYDLFCHLHSKKSL---Y 360

Query: 212 SWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN 271
           S  E   W  +L   LL    ++ +++  F  H+D+G+     +        +   +  N
Sbjct: 361 SGREQTQWADYLTEYLLRDANIITRLLNAFVDHKDLGLYYPTTFWMM---PSWVNHVTMN 417

Query: 272 REMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIE 331
           +  +        I   +  L + AG MFW R EAL  +     +  F P+     DG + 
Sbjct: 418 KAFMNAWHNEWQIDPCEGFLSYPAGGMFWARPEALKEMLEKEYTYDFFPQEPLPNDGSML 477

Query: 332 HAVERCFSLSVKKANFR 348
           HA+ER   L  +K  ++
Sbjct: 478 HALERVIGLLAEKNGYK 494


>gi|330899783|gb|EGH31202.1| hypothetical protein PSYJA_20361 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 626

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 11/260 (4%)

Query: 93  HFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT 152
           +  +            +   A +  +A+ +H++Y D   + ++ L+N     D+ +TL  
Sbjct: 94  NIKKWQPNSVLDVQATLKPEAARLNVAVCLHIFYEDYIEKFSHALANFPTQVDVFITLAD 153

Query: 153 ESASIKSEIL----KIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
                K+  +          ++  + N GR+  P L+    + L  YD  C +H KKS  
Sbjct: 154 AKHQKKTIAVFSKHPRVKNLKVRCVPNRGRNFGPLLVEFSKD-LMAYDLFCHLHSKKSL- 211

Query: 209 KGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL 268
             YS  E   W  +L   LL    ++ +++  F  H+D+G+     +        +   +
Sbjct: 212 --YSGREQTQWADYLTEYLLRDANIITRLLNAFADHKDLGLYYPTTFWMM---PSWVNHV 266

Query: 269 GKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDG 328
             N+  +        I   D  L + AG MFW R EAL  +        F P+     DG
Sbjct: 267 TMNKSFMAAWHNEWQIAPCDGFLSYPAGGMFWARPEALKDMLEKEYDYDFFPQEPLPNDG 326

Query: 329 EIEHAVERCFSLSVKKANFR 348
            + HA+ER   L  +K  ++
Sbjct: 327 SMLHALERVIGLLAEKNGYK 346


>gi|220924211|ref|YP_002499513.1| Lipopolysaccharide biosynthesis protein-like protein
           [Methylobacterium nodulans ORS 2060]
 gi|219948818|gb|ACL59210.1| Lipopolysaccharide biosynthesis protein-like protein
           [Methylobacterium nodulans ORS 2060]
          Length = 1366

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 73/309 (23%), Positives = 134/309 (43%), Gaps = 23/309 (7%)

Query: 64  GSRSGKKFFAQSNLYMMERE--LHFDGQRIHHFP--QLLHGWESPAMGKVM-QIAIKAKI 118
           G  +  +         ++    + + G      P  ++    E P        + +  ++
Sbjct: 644 GEPARWRPVPSPKQRFVQNGALMTYYGAVTSVRPADEVDLALEVPFSSIGDVGLELPERV 703

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA-SIKSEILKIFP--AARIHIMEN 175
           A++ H++Y D   E++  L+ +    DL ++  TE      +  L+ +      + +M N
Sbjct: 704 AVIAHVFYTDFCSELSAYLARIPTQADLFISTDTEDKRQQIAFALQSYNMGKLTVRVMPN 763

Query: 176 HGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVF 235
            GRD+ P L+  + +  ++Y+Y   IH KKS            WR +L  +LLG+  ++ 
Sbjct: 764 IGRDIAPMLVGFD-DVFNSYEYFLHIHSKKSPHDP----AFGSWREFLLENLLGSEDIIR 818

Query: 236 KIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF-QDQKLDFF 294
            I+     H+  G++ S+ +        +  + G N E +  L GR GI    D  L+F 
Sbjct: 819 SILYLLHAHKT-GIVFSQHFEP----VRHLLNFGYNFETMKGLLGRCGIKISNDLVLEFP 873

Query: 295 AGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDC 354
           + + FW R+ AL P+ +L L           +DG + HA+ER     V+K+ FR + V  
Sbjct: 874 SSSFFWGRSSALKPLLDLNLDWSDFAAEAGQIDGTLAHAIERSVLYIVEKSGFRWAKV-- 931

Query: 355 ILGYRKSLS 363
             G+R  L 
Sbjct: 932 --GHRSKLP 938


>gi|171779906|ref|ZP_02920810.1| hypothetical protein STRINF_01693 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281254|gb|EDT46689.1| hypothetical protein STRINF_01693 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 592

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 22/276 (7%)

Query: 93  HFPQLLHGWESPAMGKVMQIA-IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           +FP   +      + +V  ++    KIA+ +H++Y+DL  +  +   N    +DL +T  
Sbjct: 266 NFPDFKYLLARKYVKEVPAVSLADKKIAVHLHVFYVDLLEDFLDAFENFHFVYDLFITTD 325

Query: 152 --TESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
             T+   I+S +      A+I +  N GRDVLP L L   + LS+YDY+   H KKSK  
Sbjct: 326 NATKKQEIESILRSNGKDAQIFVTGNVGRDVLPMLKL--KDYLSDYDYIGHFHTKKSKEA 383

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            +  W G+ WR  L   L+        I+  FD    +G++ +    +  ++     +  
Sbjct: 384 DF--WAGESWRNELIDMLIKPAD---NILANFDND-KLGIVIADIPTF-FRFNKIVDAWN 436

Query: 270 KN--REMICTLAGRMGITFQDQKLDF-----FAGTMFWVRTEALDPIKNLRLSRYFEPKV 322
           ++     +  L  +MG+T      +F       GT  W + +AL P+ +L L+    P  
Sbjct: 437 EHLIAPAMNDLWQQMGMTKAIDFNNFHNFVMSYGTYVWFKYDALKPLFDLGLTDEDVPAE 496

Query: 323 HKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                  I HA+ER        +  +FRIS     +
Sbjct: 497 PLP-QNSILHAIERLLIYIAWNEHYDFRISKNPIDM 531


>gi|330882679|gb|EGH16828.1| hypothetical protein Pgy4_27710 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 608

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 67/317 (21%), Positives = 121/317 (38%), Gaps = 35/317 (11%)

Query: 41  WFWTLFYKRSKKLCY-----DENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFP 95
           +F T  Y R     Y        + +  G + G+ + A                   +  
Sbjct: 38  YFDTETYHRMNTDVYHAQISPLYHYLISGRQEGRTYHA-------------------NVK 78

Query: 96  QLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA 155
           +            +   A +  +AI +H++Y D   + ++ L+N  I+ D+ +TL   + 
Sbjct: 79  KWQPNNVLDVQTTLKPEAARLNVAICLHIFYEDYIEKFSHALANFPIAVDVFITLAAPNH 138

Query: 156 SIKSEIL----KIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGY 211
             K+             ++  + N GR+  P L+    + L  YD  C +H KKS    Y
Sbjct: 139 KKKTIATFGQHPRVKNLKVSCVPNRGRNFGPLLVEFSKD-LMAYDLFCHLHSKKSL---Y 194

Query: 212 SWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN 271
           S  E   W  +L   LL    ++ +++  F  H+D+G+     +        +   +  N
Sbjct: 195 SGREQTQWADYLTEYLLRDANIITRLLNAFVDHKDLGLYYPTTFWMM---PSWVNHVTMN 251

Query: 272 REMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIE 331
           +  +        I   +  L + AG MFW R EAL  +     +  F P+     DG + 
Sbjct: 252 KAFMNAWHNEWQIDPCEGFLSYPAGGMFWARPEALKEMLEKEYTYDFFPQEPLPNDGSML 311

Query: 332 HAVERCFSLSVKKANFR 348
           HA+ER   L  +K  ++
Sbjct: 312 HALERVIGLLAEKNGYK 328


>gi|325276923|ref|ZP_08142610.1| hypothetical protein G1E_25356 [Pseudomonas sp. TJI-51]
 gi|324097938|gb|EGB96097.1| hypothetical protein G1E_25356 [Pseudomonas sp. TJI-51]
          Length = 758

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 105/259 (40%), Gaps = 11/259 (4%)

Query: 94  FPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE 153
            P+    +E     ++   A   KIAI +H+YY D     A  L       DL +T+  E
Sbjct: 227 MPKWTPKFEINPASELTPKASNQKIAICLHIYYDDYIERFAEALYTFPTEVDLLITIANE 286

Query: 154 SASIKSE----ILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
           S   ++      ++      I  + N GR+  P L+    E L+ YD +C +H KKS   
Sbjct: 287 SFRDRAYQTFSKIQAVKKVTIKSVPNRGRNFGPLLVEFAQELLT-YDLLCHLHSKKSL-- 343

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            YS  E   W  +L   LL    VV +++  F  +   G+     +        +   + 
Sbjct: 344 -YSGREQTQWADYLSEYLLNDCSVVKRVLNAFSDNPQFGVYYPTTFWMM---PSWVNHVT 399

Query: 270 KNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGE 329
            N+  +  L   +G    D  L + AG MFW R +AL  I N   +    P      DG 
Sbjct: 400 MNKPHMRNLQTALGFGHFDDFLSYPAGGMFWARPKALVDILNKTYTYDDFPNEPLPNDGS 459

Query: 330 IEHAVERCFSLSVKKANFR 348
           + HA+ER      +K  ++
Sbjct: 460 MLHALERVIGPVCEKNGYQ 478


>gi|261367011|ref|ZP_05979894.1| putative polysaccharide biosynthesis protein [Subdoligranulum
           variabile DSM 15176]
 gi|282571129|gb|EFB76664.1| putative polysaccharide biosynthesis protein [Subdoligranulum
           variabile DSM 15176]
          Length = 646

 Score =  249 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 58/286 (20%), Positives = 113/286 (39%), Gaps = 18/286 (6%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANL 136
             M   E   +         ++   +     +  ++  + +IA+ +HLY++D+  +    
Sbjct: 274 RTMHPHEFTRNLGLTRVIQPVVQNAK-----QAEELCAQRRIALAMHLYFMDMLEQSVAF 328

Query: 137 LSNLSISFDLHVTLVTESASIKSEILKIFPA-----ARIHIMENHGRDVLPFLILLETEQ 191
            +      D+ V+  +E    K +I + F         + ++EN GRDV  FL  L    
Sbjct: 329 AAKFPPQTDVFVSTNSE--EKKEQIEQAFSGQKLHSVTVMVVENRGRDVGAFLCDLAP-H 385

Query: 192 LSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIG 251
           L NYDY C +H KK+ +       G  +      ++      V  ++  F+    +G++ 
Sbjct: 386 LRNYDYACFMHDKKAIQTK-PGSVGASFGYVCNENVCKNAAHVLNVLCEFENDPYLGILC 444

Query: 252 SRAYRYPNKYCDY-TCSLGKNREMICTLAGRMGITFQ---DQKLDFFAGTMFWVRTEALD 307
                +   + +  +   G N E    L   +G+      ++      G++FW R +AL+
Sbjct: 445 PPYPTHGLYFMNMCSGGWGPNFENTKKLLKELGLDVPISGEESPIAPFGSVFWFRPKALE 504

Query: 308 PIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVD 353
           P+          P+     DG I HA+ER +    + A +  + V 
Sbjct: 505 PLFAHGWQHTDFPQEPLPQDGTISHAIERVYPFVAQAAGYYPAVVM 550


>gi|297538440|ref|YP_003674209.1| Rhamnan synthesis F [Methylotenera sp. 301]
 gi|297257787|gb|ADI29632.1| Rhamnan synthesis F [Methylotenera sp. 301]
          Length = 782

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 17/264 (6%)

Query: 96  QLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA 155
           ++ +    P   +V        +A++ HL+Y  +  +    LSN+  +FD+++T  TE  
Sbjct: 490 KIEYAMLVPFSYQVESPQNNPSLAVICHLFYHQMCEDYKVYLSNIPFNFDIYITTDTE-- 547

Query: 156 SIKSEILKIFP-----AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
             K+ I K F         + +  N GRD+ P LI    +  S Y+Y+  IH K S    
Sbjct: 548 DKKAYIEKSFSGWQRGKVEVRLAVNQGRDIAPKLIACR-DIYSAYEYILHIHSKNSPYSS 606

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
                   WR ++   LLG+   V  I   F  + ++G+I  + ++             +
Sbjct: 607 IH----TGWRDYILDTLLGSQKTVSSIFEAFQLNSNLGIIAPQHFKALKLD----IGWDR 658

Query: 271 NREMICTLAGRMGITFQDQ-KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGE 329
           N ++   LAGRMG     +  +DF +G+MFW R+ AL P+ N  LS    P+     DG 
Sbjct: 659 NFKIAKKLAGRMGFDISRKAPIDFPSGSMFWARSAALLPLLNCSLSLQDFPREDGQKDGT 718

Query: 330 IEHAVERCFSLSVKKANFRISDVD 353
             H++ER +    +KA F    V 
Sbjct: 719 TAHSIERLYFFICEKAGFSWIKVA 742


>gi|312866008|ref|ZP_07726229.1| rhamnan synthesis protein F [Streptococcus downei F0415]
 gi|311098412|gb|EFQ56635.1| rhamnan synthesis protein F [Streptococcus downei F0415]
          Length = 584

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 68/277 (24%), Positives = 120/277 (43%), Gaps = 26/277 (9%)

Query: 95  PQLLHGWESPA--MGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT 152
           P L +          +  ++  ++K+A+ +H++Y+DL  E  +       ++DL +T   
Sbjct: 262 PDLPYLLARKYLEQAEAEELPAESKVAVHLHVFYVDLLQEFLDAFKTFHFAYDLFITT-- 319

Query: 153 ESASIKSEILKIFPA----ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
           +    ++EI  I       A+I +  N GRDVLP L L   +QL  YDY+   H KKSK 
Sbjct: 320 DKEEKRAEIQAILEQNQVLAQIFVTGNIGRDVLPMLKL--KDQLKGYDYIGHFHTKKSKE 377

Query: 209 KGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL 268
             Y  W G  WR+ L   L+       +I+     +  +G++ +    +  ++     + 
Sbjct: 378 ADY--WAGQSWRQELIAMLVKPAN---QILAQMAKNDRLGIVIADMPSF-FRFNKIVVAW 431

Query: 269 GKN--REMICTLAGRMGIT--FQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPK 321
            +N     +  L  +M +      + +D F    GT  W + +AL P+ +L L+  + P 
Sbjct: 432 NENLIAPEMEELWEKMSLKKSIDFKAMDTFVMSYGTYAWFKYDALSPLFDLDLTDEYVPA 491

Query: 322 VHKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                   I HA+ER        K  ++RIS     +
Sbjct: 492 EPLP-QNSILHAIERLLIYIAWDKHYDYRISPSPITM 527


>gi|317047360|ref|YP_004115008.1| family 2 glycosyl transferase [Pantoea sp. At-9b]
 gi|316948977|gb|ADU68452.1| glycosyl transferase family 2 [Pantoea sp. At-9b]
          Length = 1419

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 72/316 (22%), Positives = 125/316 (39%), Gaps = 22/316 (6%)

Query: 41  WFWTLFYKRSKKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHG 100
           W+   +   +        + + YG   G++    +   M+E      G   +        
Sbjct: 527 WYLEAYPDVATSGMDPFEHFLLYGHAEGRQ--PSATPRMLEAPFFRYGPSEYGAKGRPLL 584

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV------TES 154
            ++P     +       I + +HLYY+DL  E    L+ +   FDL ++L        E 
Sbjct: 585 IDAPVQ---LNEGFARTIGVHLHLYYVDLADEFIKHLNTIPTGFDLFISLPRGKHNVEEC 641

Query: 155 ASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWW 214
                  +K      +   EN GRD+ PF++    E LS Y+ +  IH KKS +      
Sbjct: 642 ERKFRSGIKTLKKLVVRETENKGRDIYPFIVEFGAELLS-YELILHIHSKKSPQA----- 695

Query: 215 EGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREM 274
               WRR+L +  LG   +  +I+ +FD    +G++    +    +      + G NRE+
Sbjct: 696 LSKGWRRFLLHYTLGTESITTQILNSFDNDPKLGVLFPAYFYGVTRQP----NWGGNREI 751

Query: 275 ICTLAGRMGITFQDQK-LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
           +     R+G ++      D+ AG+ FW R++AL P+ N         +     DG + H 
Sbjct: 752 VKQQLARLGFSYDMTYCPDYPAGSFFWSRSDALRPLLNGEYRLEDFDEEAGQYDGTLAHG 811

Query: 334 VERCFSLSVKKANFRI 349
            ER F       N+  
Sbjct: 812 FERLFGTIPLLQNYST 827


>gi|296876714|ref|ZP_06900762.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432216|gb|EFH18015.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           parasanguinis ATCC 15912]
          Length = 582

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARI 170
             K+A+ +H++Y+DL  E  +   +    +DL +T   +    K  I +I       AR+
Sbjct: 283 DKKVAVHLHVFYVDLLEEFLDAFRDFHFDYDLWITT--DVEEKKQAIEQILSNRAQDARV 340

Query: 171 HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGA 230
            +  N GRDVLP L+L   EQLS YDYV   H KKSK   +  W G+ WR+ L   L+  
Sbjct: 341 VVTGNIGRDVLPMLLL--KEQLSKYDYVGHFHTKKSKEADF--WAGESWRKELIEMLVKP 396

Query: 231 PGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREM----ICTLAGRMGI-- 284
                +I+   + +  +G+  +    +  +Y     +   N  +    +  L  RMG   
Sbjct: 397 AD---QILANMEANPKVGITIADIPTF-FRYNRIVVAW--NEALISPEMNKLWQRMGATK 450

Query: 285 TFQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLS 341
           T   +K++ F    GT  W + +AL P+ +L L+    P         I HA+ER     
Sbjct: 451 TIDFEKINTFVMSYGTFVWFKYDALKPLFDLNLTAADVPAEPLP-QNSILHAIERLLIYI 509

Query: 342 V--KKANFRISDVDCIL 356
              +K +FRIS    +L
Sbjct: 510 AWDQKYDFRISQNPHVL 526


>gi|154509526|ref|ZP_02045168.1| hypothetical protein ACTODO_02058 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799160|gb|EDN81580.1| hypothetical protein ACTODO_02058 [Actinomyces odontolyticus ATCC
           17982]
          Length = 620

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 107/256 (41%), Gaps = 10/256 (3%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESAS--IKSEIL 162
           A    +  A   KI  V H++Y D+  EI + LS L   + L  T   E     I++   
Sbjct: 286 ADQATLDAAASLKILAVAHIFYADMADEILDRLSVLPAGYHLVATTSNEENKALIEARAQ 345

Query: 163 KIFPAARIHIME-NHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWR 220
           +    A + ++  N GRD+  FL+       S  YD V KIH KKS +  Y+     L++
Sbjct: 346 ERGVDADVRVVSSNRGRDIGAFLVDCNDVLTSGEYDIVVKIHSKKSVQDDYN--AAQLFK 403

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAG 280
             L+ +LL +   V  I+  F  H  +GM+ +        Y     +   NR      A 
Sbjct: 404 EHLYDNLLASSDHVASILAEFAAHPGLGMVIAPMPHMG--YPTMGHAWFANRAPARDFAK 461

Query: 281 RMGI--TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           ++GI   F D +     G+MF  R EAL  +    L     P+     DG + H +ER  
Sbjct: 462 KVGITVPFDDHQPLAPYGSMFIARPEALSLLTGAGLVPEDFPEEGGYKDGSLAHVIERLL 521

Query: 339 SLSVKKANFRISDVDC 354
           S +V    + +  V  
Sbjct: 522 SYAVLSRGYYVRPVMT 537


>gi|320095829|ref|ZP_08027469.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977239|gb|EFW08942.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 619

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 10/256 (3%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEIL 162
           A  +  + A   ++  + H++Y D+  EI + LS L   + L  T   E   A+I+  + 
Sbjct: 286 AAPEAREKAASLRVVAIAHIFYADMADEIIDRLSVLPDGWRLVATTADEERKAAIEETMA 345

Query: 163 KIFPAARIHIM-ENHGRDVLPFLILLETEQL-SNYDYVCKIHGKKSKRKGYSWWEGDLWR 220
           +     ++ ++  N GRD+  FL+         +YD V KIH KKS +   +     L++
Sbjct: 346 RRGAVGQVRVVASNRGRDISAFLVDCSDVLAGDDYDVVVKIHSKKSVQDEAN--AAQLFK 403

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAG 280
             L+ +LL +   V  I+  F  H  +GM  +        Y     +   NR     LA 
Sbjct: 404 DHLYENLLDSKDHVANILAEFADHPGLGMALAPMPHMG--YPTMGHAWFANRPPARELAK 461

Query: 281 RMGI--TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           R+GI   F D +     G+MF  R  AL P+    L+    P      DG + H +ER  
Sbjct: 462 RIGITVPFDDHQPLAPYGSMFIARPRALRPLVEAGLTHDDFPPEGGYQDGSLAHVIERLL 521

Query: 339 SLSVKKANFRISDVDC 354
           + +V    +    V  
Sbjct: 522 AYAVLSEGYYARPVMT 537


>gi|194364297|ref|YP_002026907.1| hypothetical protein Smal_0519 [Stenotrophomonas maltophilia
           R551-3]
 gi|194347101|gb|ACF50224.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 686

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 11/265 (4%)

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE 160
            ++            ++  +V+H +++D   E+ + + +  +   L +T  ++  +    
Sbjct: 423 LQATRRAMTPSQPAPSRPCVVIHAWHLDALPELLSAVKDSGLPARLVITTTSDRQAQVQS 482

Query: 161 I-LKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLW 219
           I       A I   +NHGRD+LPFL   +     N   V K+H K+S  +      GD W
Sbjct: 483 ITESHGLPAEIWAYDNHGRDILPFLHAADRLLQQNESLVLKLHTKRSTHRD----NGDQW 538

Query: 220 RRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLA 279
           RR +   LLG P      +        +G++    +       +    +G N + +  L 
Sbjct: 539 RREMVDALLG-PAQAAANLAHLQADPRLGLMAPAGHLL-----NVADYIGGNAQRMERLW 592

Query: 280 GRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
            ++G+        F +G+MFWVR +AL P+ +  L           +DG + HA+ER   
Sbjct: 593 AQLGLDGAPGDGQFASGSMFWVRLQALRPLLDAHLLPSMFEVEAGQIDGTLAHAIERATG 652

Query: 340 LSVKKANFRISDVDCILGYRKSLSQ 364
                A F + D   + G     + 
Sbjct: 653 AVATCAGFSVGDTSQVHGAPPQPAS 677


>gi|55821450|ref|YP_139892.1| polysaccharide biosynthesis protein [Streptococcus thermophilus LMG
           18311]
 gi|55737435|gb|AAV61077.1| polysaccharide biosynthesis protein [Streptococcus thermophilus LMG
           18311]
          Length = 594

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 78/272 (28%), Positives = 119/272 (43%), Gaps = 21/272 (7%)

Query: 94  FPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT 152
            P   +  +   + K  Q      KIA+ +H YY+DL  +      N   ++DL +T  +
Sbjct: 264 LPTPPYLLDRKVIEKSSQTYSDTKKIAVHLHTYYVDLLEDFLKQFENFHFTYDLFLTTDS 323

Query: 153 E--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
           E   A I+S + K    ARI I  N GRDV+P L L   ++LS YDY+   H KKS    
Sbjct: 324 EDKKAEIQSILDKNGKVARIFITGNRGRDVIPMLKL--KDELSAYDYIGHFHTKKSPE-- 379

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
           Y +W GD WR  LF  L+        II   +    +G++ +    +  +Y        +
Sbjct: 380 YPYWVGDSWRNELFSMLIQPAD---NIIANLERDDRLGLVIADIPSF-FRYTKIVDPWNE 435

Query: 271 NR--EMICTLAGRM--GITFQDQKLDFF---AGTMFWVRTEALDPIKNLRLSRYFEPKVH 323
           NR  E +  L  RM  G      K++ F    GT  W + +AL P+ +L L     P   
Sbjct: 436 NRFAEGMNDLWERMDLGRDIDFDKMNTFIMSYGTFIWFKYDALKPLFDLDLQDEEIPAEP 495

Query: 324 KALDGEIEHAVERCFSL--SVKKANFRISDVD 353
                 I H++ER        ++ ++ I+  D
Sbjct: 496 IP-QHTILHSIERILVYLAWARRYDYAIAKND 526


>gi|225350704|ref|YP_002720664.1| putative glycosyl transferase, group 1 [Brachyspira hyodysenteriae
           WA1]
 gi|225216388|gb|ACN85121.1| putative glycosyl transferase, group 1 [Brachyspira hyodysenteriae
           WA1]
          Length = 342

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 14/245 (5%)

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFP-- 166
            +   K KI I +HLYYID+       L +  I FDL +T    E+  I        P  
Sbjct: 19  TEEIKKLKIGIHIHLYYIDMMDMFIKYLKDSPIEFDLFITTSKEENKDICLNAFNKLPKL 78

Query: 167 -AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFY 225
               I I+EN GRD+ P+LI     Q +NYD  C +H KKS      W   + W  +L  
Sbjct: 79  KNITIFIVENIGRDIAPWLIECNNIQ-NNYDLFCHLHTKKSLH----WESINEWGEYLIE 133

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT 285
           +L+ +   +  I+  F    +IG+I    Y Y   Y  Y      +   I  L  ++ I 
Sbjct: 134 NLI-SEEAINNILSNFILDNNIGIISPHIYYYLFPYILYIDK--DDMHHIKLLLNKLNIN 190

Query: 286 FQDQK--LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
           F+ +     F  G+M W R + L P+ +L L     P+      G I HA+ER   +  +
Sbjct: 191 FEPKPENFVFPVGSMLWYRPKVLKPLFDLNLKYSDFPQEPIPKTGTIAHAIERIIGIICE 250

Query: 344 KANFR 348
           ++N++
Sbjct: 251 QSNYK 255


>gi|55823377|ref|YP_141818.1| polysaccharide biosynthesis protein [Streptococcus thermophilus
           CNRZ1066]
 gi|55739362|gb|AAV63003.1| polysaccharide biosynthesis protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 581

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 22/254 (8%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV--TESASIKSEILKIFPAARIHI 172
             K+A+ +H++Y+DL  E  +   +   ++DL +T     +   I+  + +    A I +
Sbjct: 283 DKKVAVHLHVFYVDLLEEFLDAFQDFHFAYDLWITTDIEEKKQEIEQILSRRSQDATIVV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L+L   E+LS YDYV   H KKSK   +  W G+ WR+ L   L+    
Sbjct: 343 TGNIGRDVLPMLLL--KEKLSRYDYVGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD 398

Query: 233 VVFKIIRTFDTHRDIGMI---GSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT--FQ 287
              +I+   + +  +G+        +RY      +  +L      +  L  RMG T    
Sbjct: 399 ---QILANMEANPKVGITIGDIPTYFRYNRIVVAWNEALIS--PEMNKLWQRMGATKNID 453

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            + L+ F    GT  W + +AL P+ +L L+    P         I HA+ER        
Sbjct: 454 FKNLNTFVMSYGTFVWFKYDALKPLFDLNLTVSDVPAEPLP-QNSILHAIERLLVYIAWD 512

Query: 343 KKANFRISDVDCIL 356
           +K +FRIS    +L
Sbjct: 513 QKYDFRISQNPHVL 526


>gi|319946716|ref|ZP_08020950.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           australis ATCC 700641]
 gi|319746764|gb|EFV99023.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           australis ATCC 700641]
          Length = 581

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 24/255 (9%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA----ARI 170
             K+A+ +H++Y+DL  E  +       ++DL +T   +    K  I +I       A +
Sbjct: 283 DKKVAVHLHVFYVDLLEEFLDAFQAFHFAYDLWITT--DVEEKKQAIEEILSNRAQVATV 340

Query: 171 HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGA 230
            +  N GRDVLP L+L   EQLS+YDYV   H KKSK   +  W G+ WR+ L   L+  
Sbjct: 341 VVTGNIGRDVLPMLLL--KEQLSHYDYVGHFHTKKSKEADF--WAGESWRKELIDMLVKP 396

Query: 231 PGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR--EMICTLAGRMGI--TF 286
                KI+   + +  +G+  +    +  +Y     +  +      +  L  RMG   T 
Sbjct: 397 AD---KILANMEANPKVGITIADIPTF-FRYNRIVVAWNEVLISPEMNKLWQRMGATKTI 452

Query: 287 QDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV- 342
             + L+ F    GT  W + +AL P+ +L L     P         I HA+ER       
Sbjct: 453 DFKNLNTFVMSYGTFVWFKYDALKPLFDLNLKAADVPAEPLP-QNSILHAIERLLVYIAW 511

Query: 343 -KKANFRISDVDCIL 356
            +K +FRIS    +L
Sbjct: 512 DQKYDFRISQNPHVL 526


>gi|320325880|gb|EFW81940.1| hypothetical protein PsgB076_04646 [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 774

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 66/317 (20%), Positives = 120/317 (37%), Gaps = 35/317 (11%)

Query: 41  WFWTLFYKRSKKLCY-----DENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFP 95
           +F T  Y R     Y        + +  G + G+ + A                   +  
Sbjct: 204 YFDTETYHRMNTDVYHAQISPLYHYLISGRQEGRTYHA-------------------NVK 244

Query: 96  QLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA 155
           +            +   A +  +AI +H++Y D   + ++ L+N  I+ D+ +TL   + 
Sbjct: 245 KWQPNNVLDVQTTLKPEAARLNVAICLHIFYEDYIEKFSHALANFPIAVDVFITLAAPNH 304

Query: 156 SIKSEIL----KIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGY 211
             K+             ++  + N  R+  P L+    + L  YD  C +H KKS    Y
Sbjct: 305 KKKTIATFGQHPRVKNLKVSCVPNRERNFGPLLVEFSKD-LMAYDLFCHLHSKKSL---Y 360

Query: 212 SWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN 271
           S  E   W  +L   LL    ++ +++  F  H+D+G+     +        +   +  N
Sbjct: 361 SGREQTQWADYLTEYLLRDANIITRLLNAFVDHKDLGLYYPTTFWMM---PSWVNHVTMN 417

Query: 272 REMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIE 331
           +  +        I   +  L + AG MFW R EAL  +     +  F P+     DG + 
Sbjct: 418 KAFMNAWHNEWQIDPCEGFLSYPAGGMFWARPEALKEMLEKEYTYDFFPQEPLPNDGSML 477

Query: 332 HAVERCFSLSVKKANFR 348
           HA+ER   L  +K  ++
Sbjct: 478 HALERVIGLLAEKNGYK 494


>gi|13476280|ref|NP_107850.1| hypothetical protein mlr7559 [Mesorhizobium loti MAFF303099]
 gi|14027041|dbj|BAB53995.1| mlr7559 [Mesorhizobium loti MAFF303099]
          Length = 644

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 12/256 (4%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKIFPAAR---IH 171
            KIA+  H+YY D+  EI  L  N+ + +D   T  T E  +     L   P  +   + 
Sbjct: 297 GKIAVCAHIYYTDMLDEILGLTGNIPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVR 356

Query: 172 IME-NHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
           ++E N GRD+    I L    + + YD VC++H KKS +   S   G+L++R +  +LL 
Sbjct: 357 VVEQNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSM--GNLFKRHMVDNLLN 414

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGI--TFQ 287
           + G V  ++  F  +  +G+     +     Y     S   N+  +   A  + I   F 
Sbjct: 415 SRGYVHNVLDMFHDNPSVGLAIPPIFHI--SYPTMGFSWFANKPKVEETARLLNINVKFD 472

Query: 288 DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
           +       GTMFW R  AL  +   +            +DG   HA+ER  + +V+ A +
Sbjct: 473 ENTPVAAYGTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGY 532

Query: 348 RISDVDCILGYRKSLS 363
               + C      + +
Sbjct: 533 TTQHIMCAHQAEHNYT 548


>gi|83950907|ref|ZP_00959640.1| hypothetical protein ISM_07395 [Roseovarius nubinhibens ISM]
 gi|83838806|gb|EAP78102.1| hypothetical protein ISM_07395 [Roseovarius nubinhibens ISM]
          Length = 752

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 87/350 (24%), Positives = 138/350 (39%), Gaps = 42/350 (12%)

Query: 42  FWTLFYKRSKKLCYDEN------YVVAYGSRSGKKF--------FAQSNLYMMERELH-- 85
           F   FY+R  K  +         + V +G + G +         + + N  +    +   
Sbjct: 32  FDVRFYRREHKDLHWSCRLWARHHYVTWGEKMGLRPRADFAPEEYLRLNPDVAGSGIPPL 91

Query: 86  -----------FDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIA 134
                        GQ  +    L      P +        KA+ A+  H+YY DLW E A
Sbjct: 92  MHYLTSGQGEGRSGQPRYATRPL-PSCPLPRLRF-DPGRPKARFALHAHIYYPDLWPEFA 149

Query: 135 NLLSNLSISFDLHVTLV---TESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQ 191
                +    DL++TL     E+  +  EI + FP A +  + N GRD+LPFL+L     
Sbjct: 150 TRFDEIGDGIDLYITLTWRGEETRWLADEITERFPRAFVTPVPNRGRDILPFLLLANAGA 209

Query: 192 LSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIG 251
              YD +CKIH KKS  +     +GD WRR L   +L A G+  + ++ F          
Sbjct: 210 FDGYDALCKIHTKKSPHRD----DGDQWRRHLIDGVLPATGLQER-LQHFLADDAAAFWV 264

Query: 252 SRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKN 311
           +    Y  +        G NR+    +  R+ +      L F AG+++W++   L  IK 
Sbjct: 265 ADGQAYAARDW-----WGINRDKTAAVLRRVELDPLLDALRFPAGSIYWMKPLMLGMIKA 319

Query: 312 LRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRKS 361
           L L           +DG + HAVER        A   I +   ++  R++
Sbjct: 320 LDLDAPMFEPEKGQVDGTLAHAVERAIGGLALAAGQEIRETAALMRPRRA 369


>gi|116628171|ref|YP_820790.1| polysaccharide biosynthesis protein [Streptococcus thermophilus
           LMD-9]
 gi|116101448|gb|ABJ66594.1| Lipopolysaccharide biosynthesis protein [Streptococcus thermophilus
           LMD-9]
          Length = 581

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 22/254 (8%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA--SIKSEILKIFPAARIHI 172
             K+A+ +H++Y+DL  E  +   +   ++DL +T   E     I+  + +    A I +
Sbjct: 283 DKKVAVHLHVFYVDLLEEFLDAFQDFHFAYDLWITTDVEEKKQEIEQILSRRSQDATIVV 342

Query: 173 MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             N GRDVLP L+L   E+LS YDYV   H KKSK   +  W G+ WR+ L   L+    
Sbjct: 343 TGNIGRDVLPMLLL--KEKLSRYDYVGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD 398

Query: 233 VVFKIIRTFDTHRDIGMI---GSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT--FQ 287
              +I+   + +  +G+        +RY      +  +L      +  L  RMG T    
Sbjct: 399 ---QILANMEANPKVGITIGDIPTYFRYNRIVVAWNEALIS--PEMNKLWQRMGATKNID 453

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            + L+ F    GT  W + +AL P+ +L L+    P         I HA+ER        
Sbjct: 454 FKNLNTFVMSYGTFVWFKYDALKPLFDLNLTVSDVPAEPLP-QNSILHAIERLLVYIAWD 512

Query: 343 KKANFRISDVDCIL 356
           +K +FRIS    +L
Sbjct: 513 QKYDFRISQNPHVL 526


>gi|160936495|ref|ZP_02083863.1| hypothetical protein CLOBOL_01386 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440580|gb|EDP18318.1| hypothetical protein CLOBOL_01386 [Clostridium bolteae ATCC
           BAA-613]
          Length = 674

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 15/249 (6%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP-----AAR 169
             KIA+V HL+Y DL  E    L N+  + DL++T+       K ++   F        +
Sbjct: 290 NKKIAVVAHLFYPDLMDETLRYLQNIQENIDLYITVAN--IETKYKVYNYFESIRRSNVK 347

Query: 170 IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
           + +  N GRD    L+    E L  Y+Y+C +H KK+ R G     G  +    + + L 
Sbjct: 348 VLLSGNRGRDAGSLLVACR-EYLMQYEYLCFVHDKKTTRGGGPVTVGKAFMYHAWENTLR 406

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY-----CDYTCSLGKNREMICTLAGRMGI 284
           + G V  II+ F+ +  +G++                 ++TC   K +E+   L+ ++ +
Sbjct: 407 SGGFVSSIIKLFEKNDRLGILTPPVPALGGYLTELVGNEWTCCYQKTKELAEILSLKVPM 466

Query: 285 TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
           + Q Q   F   T FW R  AL P+          P+   A DG + HA+ER      + 
Sbjct: 467 SPQKQP--FALATAFWCRPAALKPLFEYPWRYEDFPEEPLASDGTLNHAIERIIIYVAQS 524

Query: 345 ANFRISDVD 353
             +  + V+
Sbjct: 525 EGYYTAMVE 533


>gi|269219069|ref|ZP_06162923.1| glycosyl transferase, group 2 family [Actinomyces sp. oral taxon
           848 str. F0332]
 gi|269211216|gb|EEZ77556.1| glycosyl transferase, group 2 family [Actinomyces sp. oral taxon
           848 str. F0332]
          Length = 687

 Score =  245 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 17/296 (5%)

Query: 64  GSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVH 123
           GS  G +    ++    E  +   G++   FP     W    +     IA  ++IA+V+H
Sbjct: 31  GSVKGYRSQHPAD--FSEYVMRQGGRQDSGFPD---KWR---IDPQFDIADPSRIAVVIH 82

Query: 124 LYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVLPF 183
            +Y DL  E+ + L NL   FDL VT  + +     + L+    + +  +ENHGRD+ P 
Sbjct: 83  CFYADLMPELFDRLRNLPTDFDLFVTNASGADVAVPKDLERMRHSVVVEVENHGRDIFPT 142

Query: 184 LILLETEQLSNYDYVCKIHGKKSK---RKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRT 240
           + L+ +  L  YD + K+H KKS            G  W+     DL+G+   V +I+  
Sbjct: 143 VQLVNSGILDPYDLILKLHTKKSPWREEHADLDGSGAAWKDQFLSDLVGSREKVEEILNA 202

Query: 241 FDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFW 300
           F     +G++ +       ++       G ++ ++  L  R+ ++    +L+F +G+M+W
Sbjct: 203 FAADPTLGLVTAADSIVGKEF------WGGDQRIVEQLMLRIEMSIDPDELEFASGSMYW 256

Query: 301 VRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCIL 356
            R   L  ++   L+     +    +D    HA+ER   +   +A  R  +   + 
Sbjct: 257 TRAFVLQGLRAFNLTSADFDEEKGQVDATTAHAIERIVGIVTDEAGLRTVEAPRLA 312


>gi|306831662|ref|ZP_07464819.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325978600|ref|YP_004288316.1| rhamnosyltransferase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|304426087|gb|EFM29202.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325178528|emb|CBZ48572.1| rhamnosyltransferase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 586

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 19/264 (7%)

Query: 94  FPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT 152
            P   +  +   +  V +      K+A+ +H +Y+DL  E  N   N    +DL +T  T
Sbjct: 264 LPTPPYLLDRKVLKVVEKEYSNTKKVAVHLHTFYVDLLEEFLNQFENFHFDYDLFLTTDT 323

Query: 153 E--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
           E   A I+S + K    A++ +  N GRD++P L L   E+LS+YDY+   H KKS    
Sbjct: 324 EAKKAEIESILEKNGKIAQVFLTGNRGRDIIPMLKL--KEELSSYDYIGHFHTKKSPE-- 379

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
           Y +W GD WR  L+  L+ +      I+   + + ++G++ +    +  +Y        +
Sbjct: 380 YPYWVGDSWRNELYQMLIQSAD---NILANLENNDNLGLVIADIPSF-FRYTKIVDPWNE 435

Query: 271 NR--EMICTLAGRMGIT--FQDQKLDFF---AGTMFWVRTEALDPIKNLRLSRYFEPKVH 323
           NR  + +  L  RM +        L  F    GT  W + + L P+ +L L+    P   
Sbjct: 436 NRFADGMNELWERMNLERQIDFNNLSTFIMSYGTFIWFKRDTLKPLFDLELTDDEIPSEP 495

Query: 324 KALDGEIEHAVERCFSLSVKKANF 347
                 I H++ER         N+
Sbjct: 496 IP-QHTILHSIERILVYLAWANNY 518


>gi|322516362|ref|ZP_08069287.1| rhamnosyltransferase [Streptococcus vestibularis ATCC 49124]
 gi|322125095|gb|EFX96488.1| rhamnosyltransferase [Streptococcus vestibularis ATCC 49124]
          Length = 581

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 28/260 (10%)

Query: 112 IAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA---- 167
                K+A+ +H++Y+DL  E  +        +DL +T   +    K  I KI       
Sbjct: 280 ENFDRKVAVHLHVFYVDLLEEFLDAFQAFHFIYDLWITT--DVEEKKQAIEKILSNRVQD 337

Query: 168 ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDL 227
           A + +  N GRDVLP L+L   EQLS YDYV   H KKSK   +  W G+ WR+ L   L
Sbjct: 338 ATVVVTGNIGRDVLPMLLL--KEQLSRYDYVGHFHTKKSKEADF--WAGESWRKELIEML 393

Query: 228 LGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREM----ICTLAGRMG 283
           +    +   I+   + +  +G+  +    +  +Y     +   N  +    +  L  RMG
Sbjct: 394 VKPADL---ILANMEANPKVGITIADIPTF-FRYNRIVVAW--NEALISPEMNKLWQRMG 447

Query: 284 I--TFQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
              T   + L+ F    GT  W + +AL P+ +L L+    P         I HA+ER  
Sbjct: 448 ATKTIDFKSLNTFVMSYGTFVWFKYDALKPLFDLNLTAADVPAEPLP-QNSILHAIERLL 506

Query: 339 SLSV--KKANFRISDVDCIL 356
                 +K +FRIS    +L
Sbjct: 507 IYIAWDQKYDFRISQNPHVL 526


>gi|163853098|ref|YP_001641141.1| lipopolysaccharide biosynthesis protein-like protein
           [Methylobacterium extorquens PA1]
 gi|163664703|gb|ABY32070.1| Lipopolysaccharide biosynthesis protein-like protein
           [Methylobacterium extorquens PA1]
          Length = 916

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 72/303 (23%), Positives = 132/303 (43%), Gaps = 17/303 (5%)

Query: 56  DENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFP--QLLHGWESPAMGKVMQIA 113
              + + YG + G K  A+   Y   + ++ +G      P  +  + +  P   ++    
Sbjct: 189 PFIHYIRYGRKKGYK-GAREEYYYSNQLVYPNGVVPSRRPRNENDYAFSIPLPERLRSHP 247

Query: 114 IKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIF--PAARI 170
            K K A +VH +Y +L  EI   L   +   D++V+   ++ A     + K +      +
Sbjct: 248 YK-KAAAIVHGFYPELMEEILIYLGKSNFPIDIYVSTDDSKKAEQIISMGKKYHNGQLDV 306

Query: 171 HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGA 230
            I+ N GRD+ P L    ++   NY+    IH KKS   G        WR +LF +L+G+
Sbjct: 307 RIISNRGRDIGPMLTGF-SDVFDNYEAFLHIHTKKSPHGGDGL---SSWRDYLFKNLIGS 362

Query: 231 PGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF-QDQ 289
             ++   +    T  ++G +  +             + G N + + +L  R+G+   +D 
Sbjct: 363 AEIIDSNLHILGTR-NVGFVYPQHL----YALRGILNWGYNFDTVSSLLRRVGVRLSKDM 417

Query: 290 KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRI 349
            L+F +G+MFW RT AL  + +L L           +DG + HA+ER F    + + +  
Sbjct: 418 VLEFPSGSMFWARTAALHGLLSLDLKLEDFDNEAGQVDGTLGHAIERSFLYFAETSGYSW 477

Query: 350 SDV 352
           + V
Sbjct: 478 AKV 480


>gi|293189412|ref|ZP_06608132.1| rhamnan synthesis protein F [Actinomyces odontolyticus F0309]
 gi|292821502|gb|EFF80441.1| rhamnan synthesis protein F [Actinomyces odontolyticus F0309]
          Length = 620

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 10/256 (3%)

Query: 105 AMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESAS--IKSEIL 162
           A    +  A   K+  V H++Y D+  EI + LS L   + L  T   E     I++   
Sbjct: 286 ADQATLDAAASLKVLAVAHIFYADMADEILDRLSVLPAGYHLVATTSNEENKALIEAHAQ 345

Query: 163 KIFPAARIHIME-NHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWR 220
           +    A + ++  N GRD+  FL+       S  YD V KIH KKS +  Y+     L++
Sbjct: 346 ERGVDADVRVVSSNRGRDIGAFLVDCNDVLTSGEYDIVVKIHSKKSVQDDYN--AAQLFK 403

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAG 280
             L+ +LL +   V  I+  F  H  +GM+ +        Y     +   NR      A 
Sbjct: 404 EHLYDNLLASSDHVASILAKFAAHPGLGMVIAPMPHMG--YPTMGHAWFANRAPARDFAK 461

Query: 281 RMGI--TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           ++GI   F D +     G+MF  R EAL  +    L     P+     DG + H +ER  
Sbjct: 462 KVGITVPFDDHQPLAPYGSMFIARPEALSLLTGAGLVPEDFPEEGGYKDGSLAHVIERLL 521

Query: 339 SLSVKKANFRISDVDC 354
           S +V    + +  V  
Sbjct: 522 SYAVLSRGYYVRPVMT 537


>gi|262038042|ref|ZP_06011449.1| lipopolysaccharide biosynthesis protein [Leptotrichia goodfellowii
           F0264]
 gi|261747934|gb|EEY35366.1| lipopolysaccharide biosynthesis protein [Leptotrichia goodfellowii
           F0264]
          Length = 629

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 11/262 (4%)

Query: 100 GWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKS 159
            +         +I    K+ +  H+Y+ DL  E      N+    D+ +T   E    K 
Sbjct: 287 NYNLSENQVTKKIENSPKVGLFFHIYFEDLIEECYRYALNMPEYADIFITTDKEEKKEKI 346

Query: 160 EIL--KIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGD 217
           E +  K+     I +++N GRDV  FLI    E++  YDY C  H KK+K+      +G+
Sbjct: 347 EKIFSKMKNKIDIKVIQNRGRDVSAFLIP-NKEEILKYDYACFAHDKKTKQLQ-PEIKGE 404

Query: 218 LWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG----KNRE 273
            ++   F ++LG+  +V  II  F  +  +G++   +  +   Y +     G     N E
Sbjct: 405 DFKFRCFENILGSKELVENIIGLFIENPRLGLLSPPSPNHAEFYGNLGREWGHSGNDNYE 464

Query: 274 MICTLAGRMGITFQ---DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
             C L   + I       +      GT+FW R ++L+ +          PK    +DG +
Sbjct: 465 ETCNLLKELVIEVNVDISKAPVAPYGTIFWFRPKSLEKLLKKGWKYEDFPKEPNKVDGTL 524

Query: 331 EHAVERCFSLSVKKANFRISDV 352
            HA+ER +   V+ A +  +++
Sbjct: 525 LHAIERVYPFVVQGAGYYSANI 546


>gi|329116186|ref|ZP_08244903.1| rhamnan synthesis protein F [Streptococcus parauberis NCFD 2020]
 gi|326906591|gb|EGE53505.1| rhamnan synthesis protein F [Streptococcus parauberis NCFD 2020]
          Length = 589

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 26/278 (9%)

Query: 93  HFPQLLHGWESPAMGK-VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           ++P   +   +  +   +    I  K+AI +H +Y+DL  E  +   N    +DL +T  
Sbjct: 266 NYPDFKYLLANKYLKSDLPSEVINKKVAIHLHTFYVDLLQEFLSAFENFHFDYDLFITT- 324

Query: 152 TESASIKSEILKIFP----AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSK 207
            +    K++I  +       A + +  N GRDVLP L+L   E+LS YDY+   H KKSK
Sbjct: 325 -DIEEKKTQIENVLNENNQKAEVFVTGNIGRDVLPMLLL--KEKLSVYDYIGHFHTKKSK 381

Query: 208 RKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCS 267
              +  W G+ WR+ L   L+        I+ T + +  +G++ +    Y  +Y     +
Sbjct: 382 EADF--WAGESWRKELIKMLVLPAD---SILATLEKN-KVGIVIADMPTY-FRYNKIVTA 434

Query: 268 LGKN--REMICTLAGRMGIT--FQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEP 320
             +N     +  L  +MG+T       L  F    GT  W + +AL P+ +L L+    P
Sbjct: 435 WNENLIAPEMNELWKKMGLTKSIDFNHLHTFVMSYGTFVWFKYDALKPLFDLNLTVEDVP 494

Query: 321 KVHKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                    I HA+ER        +  +FRIS     L
Sbjct: 495 AEPLP-QNSILHAIERLLIYIAWNQHYDFRISKNPVDL 531


>gi|116071143|ref|ZP_01468412.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           BL107]
 gi|116066548|gb|EAU72305.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           BL107]
          Length = 1161

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 59/311 (18%), Positives = 119/311 (38%), Gaps = 32/311 (10%)

Query: 46  FYKRS----KKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGW 101
           ++ +     +       +   +G + G              ++HF  +  +     +   
Sbjct: 141 YFSKYPDIKESGLNPIIHFFKFGIQEG---------RFSMDDIHFMRKTAN-----IKKV 186

Query: 102 ESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEI 161
            SP   K+ Q   + K  + +H++Y +L   IA+ L+ + +  D++++   +     ++ 
Sbjct: 187 SSPHPQKLTQAIEQKKFGVFLHIFYPELAKTIADYLAKIPVKIDIYISTTEKEVDELAKT 246

Query: 162 LKIFPA---ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDL 218
            +        ++    N GRDV PF++    E L  YD++ K+H KKS            
Sbjct: 247 FRRLDNSEHVQVKSFSNTGRDVAPFVVGFREEIL-KYDFILKLHSKKSPHSDALSG---- 301

Query: 219 WRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG---KNREMI 275
           W      +L+G+  V +  I     +    +I        +    +    G    N +  
Sbjct: 302 WFEHCLDNLIGSKDVFYTNIFELMNNETA-IIYPVENYALSLGIKHDSCWGHEDGNYDKA 360

Query: 276 CTLAGRMGITF--QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
             L  ++ +    +D K  F  GTMFW ++  L PI +  L  +        +DG + H+
Sbjct: 361 KPLLDKLNLKHIDRDSKFLFPTGTMFWCKSYILQPILDWNLGFHDFDNEGGQIDGTLAHS 420

Query: 334 VERCFSLSVKK 344
           +ER   L   +
Sbjct: 421 IERLIGLCCTE 431


>gi|319939379|ref|ZP_08013739.1| RgpFc protein [Streptococcus anginosus 1_2_62CV]
 gi|319811365|gb|EFW07660.1| RgpFc protein [Streptococcus anginosus 1_2_62CV]
          Length = 587

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 22/272 (8%)

Query: 93  HFPQLLHGWESPAMGKVMQIAI-KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           +FP   +      +      ++   KI + +H++Y+DL  +      N   ++DL +T  
Sbjct: 266 NFPDFKYLLARKYIQTTAPTSLSNKKIGVHLHVFYVDLLEDFLKAFENFHFAYDLFITTD 325

Query: 152 TESA--SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
            ++    I++ + +    A I +  N GRDVLP L L   + LS YDY+   H KKSK  
Sbjct: 326 NDTKKLEIEAILNQNHKNAHIFVTGNIGRDVLPMLKL--KKYLSTYDYIGHFHTKKSKEA 383

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            +  W G+ WR  L   L+        I+  F+    +G++ S    +  +Y     +  
Sbjct: 384 DF--WAGESWRNELIDMLIKPAD---NILANFEND-KLGLVISDIPTF-FRYNKIVDAWN 436

Query: 270 KN--REMICTLAGRMGITFQDQKLDF-----FAGTMFWVRTEALDPIKNLRLSRYFEPKV 322
           ++     +  L  +M +T       F       GT  W + +AL P+ +L L+    P  
Sbjct: 437 EHLIAPEMNDLWYKMKMTKPIDFNTFHTFVMSYGTFIWFKYDALKPLFDLDLTDKDVPIE 496

Query: 323 HKALDGEIEHAVERCFSLSV--KKANFRISDV 352
                  I HA+ER        +  +FRIS  
Sbjct: 497 PLP-QNSILHAIERLIVYVAWNEHYDFRISKN 527


>gi|260434430|ref|ZP_05788400.1| glycosyltransferase [Synechococcus sp. WH 8109]
 gi|260412304|gb|EEX05600.1| glycosyltransferase [Synechococcus sp. WH 8109]
          Length = 772

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 100/263 (38%), Gaps = 17/263 (6%)

Query: 96  QLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA 155
                   P    +  + I  K+ + +H++Y +L  EI   +S   I  +++++   ++ 
Sbjct: 516 PWNTKLIIPTEDVL--MNIDEKVGLHIHVHYPELLDEILKAISMNKIRPEIYISCTNQAI 573

Query: 156 ---SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYS 212
              +IK+         +I +  N GRD+ P L  L  E    Y     IH KKS      
Sbjct: 574 RDLAIKNINEHGLILKKIILTPNRGRDIGPLLTCLGQELDEKYRIYGHIHTKKSIHIARH 633

Query: 213 WWEGDLWRRWLFYDLLGAPG--VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
                 WR +L  +L+G     ++  II      + IG+        P            
Sbjct: 634 QSY--SWRTFLIENLIGNEENHMMDCIISAMIKDKTIGLAFPSDPHCPG--------WDA 683

Query: 271 NREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
           N      LA ++ I     + +F  GTMFW R  AL P+ +L L     P      DG +
Sbjct: 684 NYRQAKLLAEKLNIKSLTNEFNFPIGTMFWARKNALSPLYSLNLGWDDYPSEPIGYDGTL 743

Query: 331 EHAVERCFSLSVKKANFRISDVD 353
            H++ER      +   F  +  +
Sbjct: 744 LHSIERLIPFVAESQGFSYTMTN 766


>gi|291520004|emb|CBK75225.1| Lipopolysaccharide biosynthesis protein [Butyrivibrio fibrisolvens
           16/4]
          Length = 984

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 12/236 (5%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEI--LKIFPAARIH 171
             +A+ +HL+Y+DL  E  +  +N+   FDL+++     + + IKS +  LK+     I 
Sbjct: 327 PSVAVHLHLFYVDLLPEFVSYFANIPFRFDLYISCQEGADVSVIKSGVKELKMANKVVIR 386

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
            + N GRD+ P  +    +++  +DY   +H KKS    YS  E   WR++    LLG+P
Sbjct: 387 PLPNRGRDLAPLYVGF-ADEIRQHDYFLHVHSKKSL---YSGAEKGGWRQFSLELLLGSP 442

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKL 291
             V  I   F  +++ G++    +    +      S   N  +   L     +       
Sbjct: 443 EKVNSIFNLF-KNKNAGLVYPDIH---EEVPMIAYSWLANAGLGRKLFDEFELGEMPTVF 498

Query: 292 DFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
           ++ AG+ FW RT+AL PI N        P+     DG + HA+ER      +K  +
Sbjct: 499 NYPAGSFFWARTDALMPIFNRNYIYEDFPEEAGQTDGTLAHALERIIPFVSRKLGY 554


>gi|78184210|ref|YP_376645.1| lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9902]
 gi|78168504|gb|ABB25601.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9902]
          Length = 1161

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 122/312 (39%), Gaps = 32/312 (10%)

Query: 46  FYKRSKKLC----YDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGW 101
           ++ +   +         + + +G +                ++HF  +        +   
Sbjct: 141 YFSKYPDIKESEINPMVHFLKFGIQES---------RYSMDDIHFMRKTAG-----IKKA 186

Query: 102 ESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEI 161
                GK++    + K  + +H++Y +L   IA+ +  + +  D+H++   ++ S  +EI
Sbjct: 187 TYSNDGKLISSIGQKKFGVFLHIFYPELAPIIADYIRKIPVKIDIHISTTHDAISGLTEI 246

Query: 162 LKIFPA---ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDL 218
            K        ++    N GRDV PF++    E++  YDY+ K+H KKS            
Sbjct: 247 FKGLENSLNVQVKSFPNIGRDVAPFIVGFR-EEIPKYDYILKLHSKKSPHSNALSG---- 301

Query: 219 WRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG---KNREMI 275
           W      +L+G+  V +  I+  +   DI ++        +    +    G    N    
Sbjct: 302 WFEHCLDNLIGSIDVFYTNIQELNK-EDISIVYPVENYALSLGIKHDSCWGHEDGNYNKA 360

Query: 276 CTLAGRMGITF--QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
            TL  ++G+    ++ +  F  G MFW + + L PI +  L           +DG + H+
Sbjct: 361 KTLLKKLGLEQINRNSEFLFPTGNMFWCKPDILKPILDWDLKFEDFDNEGGQIDGTLAHS 420

Query: 334 VERCFSLSVKKA 345
           +ER   L   + 
Sbjct: 421 IERLIGLCCTEY 432


>gi|322373386|ref|ZP_08047922.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus sp.
           C150]
 gi|321278428|gb|EFX55497.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus sp.
           C150]
          Length = 594

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 73/249 (29%), Positives = 111/249 (44%), Gaps = 20/249 (8%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            KIA+ +H YY+DL  +      N   ++DL +T  +E     I+S + K    ARI I 
Sbjct: 287 KKIAVHLHTYYVDLLDDFLRQFENFHFTYDLFLTTDSEEKKKEIQSILDKHGKEARIFIT 346

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRDV+P L L   ++LS YDY+   H KKS    Y +W GD WR  LF  L+     
Sbjct: 347 GNRGRDVIPMLKL--KDELSAYDYIGHFHTKKSPE--YPYWVGDSWRNELFSMLIQPAD- 401

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR--EMICTLAGRM--GITFQDQ 289
              II   +    +G++ +    +  +Y        +NR  E +  L  RM  G      
Sbjct: 402 --NIIANLEHDDRLGLVIADIPTF-FRYTKIVDPWNENRFAEGMNDLWERMDLGRDIDFD 458

Query: 290 KLDFF---AGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSL--SVKK 344
           K++ F    GT  W + + L P+ +L L     P         I H++ER        ++
Sbjct: 459 KMNTFIMSYGTFIWFKYDTLKPLFDLDLQDEEIPAEPIP-QHTILHSIERILVYLAWARR 517

Query: 345 ANFRISDVD 353
            ++ I+  D
Sbjct: 518 YDYAIAKND 526


>gi|299133415|ref|ZP_07026610.1| Rhamnan synthesis F [Afipia sp. 1NLS2]
 gi|298593552|gb|EFI53752.1| Rhamnan synthesis F [Afipia sp. 1NLS2]
          Length = 408

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 5/242 (2%)

Query: 104 PAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILK 163
           P   K +Q+  +    I+VHL+Y D+W +    L NL+  F L VTL   +    + +  
Sbjct: 153 PGAPKPLQLNGRIATGIIVHLHYCDVWPDFEKRLRNLTCPFSLIVTLNESNPDFAARVAG 212

Query: 164 IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWL 223
            FP A++ +  N GRDV PF+ LL    L +++ +CK+HGKK+   G     G++WRR L
Sbjct: 213 QFPNAKVLVYPNRGRDVGPFIQLLREGHLDDFELICKLHGKKTVSLGPRMIFGEIWRRLL 272

Query: 224 FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
             DL+G+  +V  I++ F +   +G++GS  +R      +Y  +  +N  +   LA R+G
Sbjct: 273 LNDLVGSDELVRAILQRFISQPGLGLVGSSHFR-----GNYLGTWPRNAALTLELAKRLG 327

Query: 284 ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
              +  KLDFFAGTMFWVR E LD +K+L LS+   P      DG ++HA+ER F     
Sbjct: 328 CPEERFKLDFFAGTMFWVRRELLDLLKSLNLSQDDFPVEAGQTDGTLQHALERIFGALPG 387

Query: 344 KA 345
            A
Sbjct: 388 LA 389


>gi|306833804|ref|ZP_07466929.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus bovis
           ATCC 700338]
 gi|304423998|gb|EFM27139.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus bovis
           ATCC 700338]
          Length = 586

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 19/264 (7%)

Query: 94  FPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT 152
            P   +  +   +  V +      K+A+ +H +Y+DL  E  N   N    +DL +T  T
Sbjct: 264 LPTPPYLLDRKVLKVVEKEYSNTKKVAVHLHTFYVDLLEEFLNQFENFHFDYDLFLTTDT 323

Query: 153 E--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
           E   A I+S + K    A++ +  N GRD++P L L   E+LS+YDY+   H KKS    
Sbjct: 324 EAKKAEIESILEKNGKTAQVFLTGNRGRDIIPMLKL--KEELSSYDYIGHFHTKKSPE-- 379

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
           Y +W GD WR  L+  L+ +      ++   + + ++G++ +    +  +Y        +
Sbjct: 380 YPYWVGDSWRNELYQMLIQSAD---NVLANLENNDNLGLVIADIPSF-FRYTKIVDPWNE 435

Query: 271 NR--EMICTLAGRMGI--TFQDQKLDFF---AGTMFWVRTEALDPIKNLRLSRYFEPKVH 323
           NR  + +  L  RM +        L  F    GT  W + + L P+ +L L+    P   
Sbjct: 436 NRFADGMNELWERMNLGRQIDFNNLSTFIMSYGTFIWFKHDTLKPLFDLELTDDEIPSEP 495

Query: 324 KALDGEIEHAVERCFSLSVKKANF 347
                 I H++ER         N+
Sbjct: 496 IP-QHTILHSIERILVYLAWANNY 518


>gi|312867647|ref|ZP_07727853.1| rhamnan synthesis protein F [Streptococcus parasanguinis F0405]
 gi|311096710|gb|EFQ54948.1| rhamnan synthesis protein F [Streptococcus parasanguinis F0405]
          Length = 582

 Score =  242 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 28/262 (10%)

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA-- 167
           +      K+A+ +H++Y+DL  E  +        +DL +T   +    K  I KI     
Sbjct: 278 LAENFDRKVAVHLHVFYVDLLEEFLDAFQAFHFVYDLWITT--DVEEKKQTIEKILSNRA 335

Query: 168 --ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFY 225
             A + +  N GRDVLP L+L   EQLS YDYV   H KKSK   +  W G+ WR+ L  
Sbjct: 336 QDATVVVTGNIGRDVLPMLLL--KEQLSQYDYVGHFHTKKSKEADF--WAGESWRKELIE 391

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREM----ICTLAGR 281
            L+       +I+   + +  +G+  +    +  +Y     +   N  +    +  L  R
Sbjct: 392 MLVKPAD---QILANMEANPKVGITIADIPTF-FRYNRIVVAW--NEALISPEMNKLWER 445

Query: 282 MGI--TFQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
           MG   T   + L+ F    GT  W + +AL P+ +L L+    P         I HA+ER
Sbjct: 446 MGAAKTIDFKNLNTFVMSYGTFVWFKYDALKPLFDLNLTAANVPAEPLP-QNSILHAIER 504

Query: 337 CFSLSV--KKANFRISDVDCIL 356
                   +K +FRIS    +L
Sbjct: 505 LLIYIAWDQKYDFRISQNPHVL 526


>gi|13476281|ref|NP_107851.1| hypothetical protein mlr7560 [Mesorhizobium loti MAFF303099]
 gi|14027042|dbj|BAB53996.1| mlr7560 [Mesorhizobium loti MAFF303099]
          Length = 637

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 12/247 (4%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKI--FPAARIH 171
            KIA+  H+YY D+  EI  L  N+ + +D   T  T  + A I++ + K        + 
Sbjct: 297 GKIAVCAHIYYTDMLEEILALTGNIPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVR 356

Query: 172 IME-NHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
           ++E N GRD+    I L    + + YD VC++H KKS +   S    +L++R +  +LL 
Sbjct: 357 VVEKNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASRS--NLFKRHMLENLLN 414

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ 289
             G V  ++  F  +  +G+           Y     +   NR  +   A  + I  +  
Sbjct: 415 TRGYVHNVLDMFHDNPSVGLAVPPVVHI--SYPTMGHAWFFNRPKVEETARLLNIKVKFD 472

Query: 290 K--LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
                   GTMFW R  AL  +   +            +DG + H +ER  + + + A +
Sbjct: 473 HDTPVAAYGTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGY 532

Query: 348 RISDVDC 354
               + C
Sbjct: 533 TTRHIMC 539


>gi|288905572|ref|YP_003430794.1| polysaccharide biosynthesis protein (RgpF) [Streptococcus
           gallolyticus UCN34]
 gi|288732298|emb|CBI13867.1| Putative polysaccharide biosynthesis protein (RgpF) [Streptococcus
           gallolyticus UCN34]
          Length = 586

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 19/264 (7%)

Query: 94  FPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT 152
            P   +  +   +  V +      K+A+ +H +Y+DL  E  N   N    +DL +T  T
Sbjct: 264 LPTPPYLLDRKVLKVVEKEYSNTKKVAVHLHTFYVDLLEEFLNQFENFHFDYDLFLTTDT 323

Query: 153 E--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
           E   A I+S + K    A++ +  N GRD++P L L   E+LS+YDY+   H KKS    
Sbjct: 324 EAKKAEIESILEKNGKIAQVFLTGNRGRDIIPMLKL--KEELSSYDYIGHFHTKKSPE-- 379

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
           Y +W GD WR  L+  L+ +      I+   + + ++G++ +    +  +Y        +
Sbjct: 380 YPYWVGDSWRNELYQMLIQSAD---NILANLENNDNLGLVIADIPSF-FRYTKIVDPWNE 435

Query: 271 NR--EMICTLAGRMGIT--FQDQKLDFF---AGTMFWVRTEALDPIKNLRLSRYFEPKVH 323
           NR  + +  L   M +        L  F    GT  W + + L P+ +L L+    P   
Sbjct: 436 NRFADGMNELWECMNLERQIDFNNLSTFIMSYGTFIWFKRDTLKPLFDLELTDDEIPSEP 495

Query: 324 KALDGEIEHAVERCFSLSVKKANF 347
                 I H++ER         N+
Sbjct: 496 IP-QHTILHSIERILVYLAWANNY 518


>gi|219670466|ref|YP_002460901.1| Rhamnan synthesis F [Desulfitobacterium hafniense DCB-2]
 gi|219540726|gb|ACL22465.1| Rhamnan synthesis F [Desulfitobacterium hafniense DCB-2]
          Length = 606

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 8/266 (3%)

Query: 100 GWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIK 158
            +  P+   V  +  + K+ +  H+YY DL     + + ++    D+ +T    E   I 
Sbjct: 275 NYFLPSDYVVKPLKRQPKVVVCFHVYYEDLLDSCFHYMQSIPQFADIVITTPKKELVGII 334

Query: 159 SEILKIFP--AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEG 216
            E +K +      I ++   GR    FL+  + + + +YDY C +H KKS         G
Sbjct: 335 EEKIKSYELNNTTIKVINARGRAESAFLVATK-DFILDYDYACIVHDKKSSFL-RPGCVG 392

Query: 217 DLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMIC 276
             +       LL     V  I+  F+ +  IG +      + N    Y    G N +   
Sbjct: 393 VEFGLQNLDALLATSAYVENILSIFEDNPRIGALEPVHLLHANFRDLYGGEWGANYKGTE 452

Query: 277 TLAGRMGITF---QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
               R GI      D       G MFW R   +  I ++       P+    LDG + H 
Sbjct: 453 EFLKRAGIDLLISPDVPPLAPMGAMFWFRPICMKRILDMEWEYEDFPEEPLPLDGSLIHI 512

Query: 334 VERCFSLSVKKANFRISDVDCILGYR 359
           +ER +   V+ A +    V  I    
Sbjct: 513 IERAYPFIVQDAGYLTGWVSTIEDAE 538


>gi|322385732|ref|ZP_08059376.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           cristatus ATCC 51100]
 gi|321270470|gb|EFX53386.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           cristatus ATCC 51100]
          Length = 598

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 21/272 (7%)

Query: 94  FPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT 152
            P   +  +   + +  Q      KIA+ +H YY+DL  +      N   ++DL +T  +
Sbjct: 264 LPTPPYLLDRKVIEESSQTYSDTKKIAVHLHTYYVDLLEDFLKQFENFHFTYDLFLTTDS 323

Query: 153 ESA--SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
           E     I++ +LK     +I+I  N GRD++P L L   E+L  YDY+   H KKS    
Sbjct: 324 EKKKLEIEAVLLKRNQLGKIYITGNKGRDIIPMLKL--REELCTYDYIGHFHTKKSPE-- 379

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
           Y +W GD WR  LF  LL    +   I+ + +  + +G++ +    +  +Y        +
Sbjct: 380 YPYWVGDSWRNELFDMLLKPADL---IMASLENDKRLGLVIADIPTF-FRYTKIVDPWNE 435

Query: 271 NR--EMICTLAGRMGIT--FQDQKLDFF---AGTMFWVRTEALDPIKNLRLSRYFEPKVH 323
           N+  + +  L  RM I       KL+ F    GT  W + +AL P+ +L L     P   
Sbjct: 436 NKFADDMNILWERMDINRSIDFNKLNTFIMSYGTFIWFKYDALKPLFDLNLQDEDIPSEP 495

Query: 324 KALDGEIEHAVERCFSLSV--KKANFRISDVD 353
                 I H++ER        ++ ++ IS  D
Sbjct: 496 LP-QHTILHSIERILVYLAWSQRFDYAISKND 526


>gi|291516581|emb|CBK70197.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium longum
           subsp. longum F8]
          Length = 688

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 13/261 (4%)

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE 160
           +  P+     Q   + + A + H+Y++DL  +  + +++L    DL++T   +      E
Sbjct: 310 YVLPSQAINPQTHDRPRSAFIYHVYFMDLLEDTCHYIASLPEETDLYITSTEDKIPQIRE 369

Query: 161 ILKIFP---AARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYSW 213
            ++       A    + N GRDV   L+      LS  YD +   H KKS   +  G+  
Sbjct: 370 YMQQHGISHQATFIPVINRGRDVSALLVAACPVVLSGKYDVIGFAHDKKSSQNQENGHHG 429

Query: 214 WEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY-CDYTCSLGKNR 272
            E   +   L  + LG+   V  I+  F  +  +G +      +   +        G N 
Sbjct: 430 TESQGFAYKLMENTLGSEAYVKNILTLFAENPRLGQVTPPPPYHALYFAHTIPHDWGANY 489

Query: 273 EMICTLAG-RMGITFQDQKLDF---FAGTMFWVRTEALDPIKNLRLSRYFE-PKVHKALD 327
           E+   L   R+GI              G+ +W R EAL P+           P+     D
Sbjct: 490 EITKELLEDRLGIHVPLSPTKPTASAMGSCYWFRVEALKPLFEYGWKYEDFLPEGQMGED 549

Query: 328 GEIEHAVERCFSLSVKKANFR 348
           G I HA+ER      +   + 
Sbjct: 550 GTISHAIERANGYICQSRGYY 570


>gi|325928537|ref|ZP_08189725.1| Lipopolysaccharide biosynthesis protein [Xanthomonas perforans
            91-118]
 gi|325541076|gb|EGD12630.1| Lipopolysaccharide biosynthesis protein [Xanthomonas perforans
            91-118]
          Length = 1415

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 18/264 (6%)

Query: 95   PQLLHGWE-----SPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVT 149
            P   +G+        A+ + +      ++A+V+H +Y ++  E+   L +  + + L ++
Sbjct: 1141 PDRKYGYAYLEATRRALRRPVMPRTPERVAVVIHAFYPEILPEMLKELQSWDVPYFLIIS 1200

Query: 150  LVTESASIKSEILKIFPA-ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
             V + A      L      A + + EN GRD+LPFL +++ +       V K+H K+S  
Sbjct: 1201 TVADKADEVRGYLADLSVVADVRVFENRGRDILPFLEIMK-DLRGRESLVLKLHTKRSLH 1259

Query: 209  KGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL 268
            +     +G+ WRR +   LL AP V  +I   F     +G+     +         T   
Sbjct: 1260 RQ----DGESWRRDMLEKLL-APKVASEIFAAFREQERLGLAAPEGHIL-----SMTTYW 1309

Query: 269  GKNREMICTLAGRMGITF-QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALD 327
            G N + +  L+ +M +         F AG+MF+VR EA+D I +L L R         +D
Sbjct: 1310 GANADTVHRLSKQMHVDPVNPVTAMFAAGSMFYVRPEAIDSIMDLDLRREDFEPEAGQVD 1369

Query: 328  GEIEHAVERCFSLSVKKANFRISD 351
            G + HA+ERCFSL+V    + I+ 
Sbjct: 1370 GTLAHAIERCFSLAVCSTGYYIAS 1393


>gi|322690050|ref|YP_004209784.1| hypothetical protein BLIF_1872 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320461386|dbj|BAJ72006.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 672

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 13/261 (4%)

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE 160
           +  P+     Q   + + A + H+Y++DL  +  + +++L    DL++T   +      E
Sbjct: 288 YVLPSQAINPQTHDRPRSAFIYHVYFMDLLEDTCHYIASLPEETDLYITSTEDKIPQIRE 347

Query: 161 ILKIFP---AARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYSW 213
            ++       A    + N GRDV   L+      LS  YD +   H KKS   +  G+  
Sbjct: 348 YMQQHGISHQATFIPVINRGRDVSALLVAACPVVLSGKYDVIGFAHDKKSSQNQENGHHG 407

Query: 214 WEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY-CDYTCSLGKNR 272
            E   +   L  + LG+   V  I+  F  +  +G +      +   +        G N 
Sbjct: 408 TESQGFAYKLMENTLGSEAYVKNILTLFAENPRLGQVTPPPPYHALYFAHTIPHDWGANY 467

Query: 273 EMICTLAG-RMGITFQDQKLDF---FAGTMFWVRTEALDPIKNLRLSRYFE-PKVHKALD 327
           E+   L   R+GI              G+ +W R EAL P+           P+     D
Sbjct: 468 EITKELLEDRLGIHVPLSPTKPTASAMGSCYWFRVEALKPLFEYGWKYEDFLPEGQMGED 527

Query: 328 GEIEHAVERCFSLSVKKANFR 348
           G I HA+ER      +   + 
Sbjct: 528 GTISHAIERANGYICQSRGYY 548


>gi|189440434|ref|YP_001955515.1| lipopolysaccharide biosynthesis protein [Bifidobacterium longum
           DJO10A]
 gi|317482688|ref|ZP_07941702.1| rhamnan synthesis protein F [Bifidobacterium sp. 12_1_47BFAA]
 gi|189428869|gb|ACD99017.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium longum
           DJO10A]
 gi|316915934|gb|EFV37342.1| rhamnan synthesis protein F [Bifidobacterium sp. 12_1_47BFAA]
          Length = 666

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 13/261 (4%)

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE 160
           +  P+     Q   + + A + H+Y++DL  +  + +++L    DL++T   +      E
Sbjct: 288 YVLPSQAINPQTHDRPRSAFIYHVYFMDLLEDTCHYIASLPEETDLYITSTEDKIPQIRE 347

Query: 161 ILKIFP---AARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYSW 213
            ++       A    + N GRDV   L+      LS  YD +   H KKS   +  G+  
Sbjct: 348 YMQQHGISHQATFIPVINRGRDVSALLVAACPVVLSGKYDVIGFAHDKKSSQNQENGHHG 407

Query: 214 WEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY-CDYTCSLGKNR 272
            E   +   L  + LG+   V  I+  F  +  +G +      +   +        G N 
Sbjct: 408 TESQGFAYKLMENTLGSEAYVKNILTLFAENPRLGQVTPPPPYHALYFAHTIPHDWGANY 467

Query: 273 EMICTLAG-RMGITFQDQKLDF---FAGTMFWVRTEALDPIKNLRLSRYFE-PKVHKALD 327
           E+   L   R+GI              G+ +W R EAL P+           P+     D
Sbjct: 468 EITKELLEDRLGIHVPLSPTKPTASAMGSCYWFRVEALKPLFEYGWKYEDFLPEGQMGED 527

Query: 328 GEIEHAVERCFSLSVKKANFR 348
           G I HA+ER      +   + 
Sbjct: 528 GTISHAIERANGYICQSRGYY 548


>gi|302337198|ref|YP_003802404.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
 gi|301634383|gb|ADK79810.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
          Length = 1808

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 69/305 (22%), Positives = 124/305 (40%), Gaps = 28/305 (9%)

Query: 55   YDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAI 114
                + + YG    +K     +   +  E H        F +  +G   P +    +I +
Sbjct: 961  NPLFHFIKYGYSENRKMVHPGD---INSEFHR------SFGKSEYGVTGPVLYYDREIQL 1011

Query: 115  KAK----IAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV---TESASIKSEILKIFP- 166
              +    I + +HL+YIDL  E+ + L N+ + F L ++      +   IK  + K  P 
Sbjct: 1012 NPRFNLSIGVHLHLFYIDLAEELLSSLINIPVCFSLFISTSAGVKDQEYIKKIVNKKLPL 1071

Query: 167  --AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLF 224
                 +   EN GRD+ PF++      LS +D +   H KKS             RR+L 
Sbjct: 1072 CNECTVIQTENRGRDIAPFIVEFGN-SLSQFDLILHFHSKKSLHSDSLSDA----RRFLL 1126

Query: 225  YDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGI 284
            + +LG   +  + +  F  +  IGM+    +       ++     +          +MGI
Sbjct: 1127 HYILGNKAITIQNLNMFFENGSIGMVAPPYHPSLRNMPNFGLQEYE----TKQFLKKMGI 1182

Query: 285  TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
             +  +  DF AG+ FW R +A+  +    +     P+    +DG + H +ER   +  K+
Sbjct: 1183 NYSGKCTDFPAGSFFWCRKDAIRQLLTSNIRWNSFPEEKGQIDGTLAHVIERSLGIICKQ 1242

Query: 345  ANFRI 349
             NF+I
Sbjct: 1243 NNFKI 1247


>gi|94988294|ref|YP_596395.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS9429]
 gi|94992170|ref|YP_600269.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS2096]
 gi|94541802|gb|ABF31851.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS9429]
 gi|94545678|gb|ABF35725.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS2096]
          Length = 581

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T+ DIG+I +    +  ++     +   N  +I      L  +M +     
Sbjct: 399 --SILSAFETN-DIGIIIADIPSF-FRFNKIVNAW--NEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 NSYDFRI 518


>gi|94990172|ref|YP_598272.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS10270]
 gi|94543680|gb|ABF33728.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS10270]
          Length = 581

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T+ DIG+I +    +  ++     +   N  +I      L  +M +     
Sbjct: 399 --SILSAFETN-DIGIIIADIPSF-FRFNKIVNAW--NEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 NSYDFRI 518


>gi|332535404|ref|ZP_08411194.1| glycosyl transferase, group 1 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035169|gb|EGI71680.1| glycosyl transferase, group 1 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 672

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 106/268 (39%), Gaps = 11/268 (4%)

Query: 85  HFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISF 144
           H   +     P     +               K+A+  H++Y +        L+  +   
Sbjct: 132 HGKKEGRLALPAKAKWYPKAIASSANGEPTTLKLAMCFHVFYGEFIDYYCGALAKFTQQV 191

Query: 145 DLHVTLVTESASIKS----EILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCK 200
           D+ V++ +E  + K+    +         + ++ NHGR+  P L+   ++ L NYD  C 
Sbjct: 192 DVFVSVASEELAKKAIHDFKACSKVNKVVVKVVPNHGRNFGPMLVEFASD-LQNYDLFCH 250

Query: 201 IHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNK 260
           +H KKS    YS      W  +L   LL  P V+ +++  F+ +   G+    ++     
Sbjct: 251 MHSKKSL---YSGRAQTQWADYLGEYLLNDPHVIKQVLNHFNDNPKSGLYYPTSFWMM-- 305

Query: 261 YCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEP 320
             D+     KN+        +  I  +D  L + AG MFW R EAL  + N        P
Sbjct: 306 -PDWVNHWLKNKPAAQKFTKKWNIELKDDFLAYPAGGMFWARPEALKQLLNKEYKYDDFP 364

Query: 321 KVHKALDGEIEHAVERCFSLSVKKANFR 348
                 DG   HA+ER   L V+K  ++
Sbjct: 365 GEPLPNDGSQLHALERMLGLLVEKNGYK 392


>gi|21910063|ref|NP_664331.1| hypothetical protein SpyM3_0527 [Streptococcus pyogenes MGAS315]
 gi|28896239|ref|NP_802589.1| hypothetical protein SPs1327 [Streptococcus pyogenes SSI-1]
 gi|21904254|gb|AAM79134.1| putative protein [Streptococcus pyogenes MGAS315]
 gi|28811490|dbj|BAC64422.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 581

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T+ DIG+I +    +  ++     +   N  +I      L  +M +     
Sbjct: 399 --SILSAFETN-DIGIIIADIPSF-FRFNKIVNAW--NEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 NSYDFRI 518


>gi|50913971|ref|YP_059943.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS10394]
 gi|50903045|gb|AAT86760.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS10394]
          Length = 581

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T+ DIG+I +    +  ++     +   N  +I      L  +M +     
Sbjct: 399 --SILSAFETN-DIGIIIADIPSF-FRFNKIVNAW--NEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 NSYDFRI 518


>gi|78213552|ref|YP_382331.1| lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9605]
 gi|78198011|gb|ABB35776.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9605]
          Length = 1162

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 113/302 (37%), Gaps = 28/302 (9%)

Query: 51  KKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVM 110
           +       +   +G          +        +HF  +       +   + +     + 
Sbjct: 152 ESGLNPMVHCFKFG---------MNEHRYSMDNIHFMRKMADIKKTVTDDFNA-----IK 197

Query: 111 QIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPA--- 167
           +  I  K+ I +H++Y +L   IA  L N+  S D+ ++   +S +   +I         
Sbjct: 198 EGLINKKVGIFLHIFYPELGETIAAYLKNIPCSIDVFISTREDSVAALEKIFARVENTQK 257

Query: 168 ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDL 227
             +    N GRDV PF++    +Q+ NYDY+ K+H KKS            W      +L
Sbjct: 258 IEVRHFSNIGRDVAPFIVGFR-DQILNYDYILKLHSKKSPHSNALSG----WFLHCLDNL 312

Query: 228 LGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG---KNREMICTLAGRMGI 284
           +G+  +    ++   +  ++G++        +    +    G    N         R  +
Sbjct: 313 IGSEAITATNLKALQS-PEVGIVYPIENYALSLGIQHDSCWGHEDGNYAKARPFLNRYNL 371

Query: 285 T--FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV 342
               ++ +  F  GTMFW +   L  I +  L+     +    +DG I H++ER   +S 
Sbjct: 372 RQIKRESQFQFPTGTMFWCKPAVLQSILDWGLNWNNFDEEGGQIDGTIAHSIERLIGIST 431

Query: 343 KK 344
            +
Sbjct: 432 TE 433


>gi|225868697|ref|YP_002744645.1| rhamnan synthesis protein F family protein [Streptococcus equi
           subsp. zooepidemicus]
 gi|225701973|emb|CAW99527.1| rhamnan synthesis protein F family protein [Streptococcus equi
           subsp. zooepidemicus]
          Length = 581

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 22/276 (7%)

Query: 93  HFPQLLHGWESPAMGK-VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           H P   +      + +  + I    KIA+ +H++Y+DL  E     S+    +DL +T  
Sbjct: 260 HLPDAKYLLAHKYLPEQPISIDQSKKIAVHLHVFYVDLLSEFLEAFSHFHFDYDLLITTD 319

Query: 152 T--ESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
           +  + A IK  + +   +A I +  N GRDVLP L L   E+LS YDY+   H KKSK  
Sbjct: 320 SKAKKAEIKEILRESGASADILVTGNIGRDVLPMLTL--KERLSQYDYIGHFHTKKSKEA 377

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            +  W G  WR  L   ++       +I+        IG++ +    +  ++     +  
Sbjct: 378 DF--WAGQSWRTELIDMMVKPAD---QILTALAAD-AIGIVIADIPSF-FRFNKIVDAWN 430

Query: 270 KN--REMICTLAGRMGIT--FQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKV 322
           ++     +  L   MG+T     Q +D F    GT  W + +AL P+ +L LS    P  
Sbjct: 431 EHLIAPEMNQLWQAMGLTKRIDFQTMDTFVMSYGTFVWFKYDALKPLFDLDLSEADIPAE 490

Query: 323 HKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                  I HA+ER        +  +FRIS  + +L
Sbjct: 491 PLP-QNSILHAIERLLIYIAWDRHYDFRISRNEKLL 525


>gi|332995244|gb|AEF05299.1| hypothetical protein ambt_19030 [Alteromonas sp. SN2]
          Length = 638

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 15/280 (5%)

Query: 73  AQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIE 132
             ++     R  H    ++ +  +     +   + K      + K+AIV+H++Y D   +
Sbjct: 93  PLTHFMYHGRHEHRASSKVMN--RWFPSTDL--VAKETSSWKQQKVAIVLHIFYPDFVDK 148

Query: 133 IANLLSNLSISFDLHVTLVTESASIKSEI----LKIFPAARIHIMENHGRDVLPFLILLE 188
            A  +     + D+ +T  T++   K+      LK     +  + EN GR+  PFL+   
Sbjct: 149 FAASVQRFPTNVDVFITAGTDAIKNKALKTFNGLKNVQKVQAVLCENRGRNFGPFLVNF- 207

Query: 189 TEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIG 248
           +++L +YD +C +H KKS    YS  E   W  +    LL    VV  I+R FD   ++G
Sbjct: 208 SDELLDYDLMCHLHSKKSL---YSGREQTQWFDYQNNFLLKDKHVVKSILRLFDEREELG 264

Query: 249 MIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDP 308
           +    ++        +      N+ +      + G+   D  +++  G MFW R +A+ P
Sbjct: 265 IYYPTSFWMM---PAWVNHWTCNKGISQDFVDKWGLDISDDFVNYPVGGMFWARPKAIAP 321

Query: 309 IKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
           +   +      P+     DG   HA+ER   L  +K  F+
Sbjct: 322 LLKEKFEYSDFPEEPLPNDGSWLHALERSIGLLAEKQGFK 361


>gi|261868364|ref|YP_003256286.1| lipopolysaccharide biosynthesis protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|3132260|dbj|BAA28137.1| unnamed protein product [Actinobacillus actinomycetemcomitans]
 gi|261413696|gb|ACX83067.1| lipopolysaccharide biosynthesis protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 632

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 13/250 (5%)

Query: 107 GKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE---ILK 163
            KV ++    KI +V H+YY D+  EI +   N+  S+DL +T   E + ++ E   ILK
Sbjct: 285 SKVEKVRSDIKILVVAHIYYSDMLDEIISYTQNIPCSYDLLITTANEKSKLEIESNPILK 344

Query: 164 IFPA--ARIHIME-NHGRDVLPFLILLETEQLS-NYDYVCKIHGKKSKRKGYSWWEGDLW 219
           +  A    + ++E N GRD+    I  + E +S  YD+VC++H KKS +  ++      +
Sbjct: 345 MSGAKGINVKVVEQNRGRDMSSLFITCKQEIISERYDWVCRLHSKKSPQNSHNMSIH--F 402

Query: 220 RRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLA 279
           +  ++ ++L     + K+I   D ++ IG          +    +      NR++   +A
Sbjct: 403 KEMMYLNILKDKAYISKVINYLDKNKSIGFAMPSMVHIGHPTLGHA--WFTNRDLAIKIA 460

Query: 280 GRMGITFQDQKLDFFA--GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
            R+GI      +  FA  GTMFW R EAL  +           K     D  + H +ER 
Sbjct: 461 ERVGIKLPFDDISPFAAYGTMFWFRPEALKKLFEYNWKFEDFNKEPMHQDSSLAHILERL 520

Query: 338 FSLSVKKANF 347
              +   A +
Sbjct: 521 LVYAAHDAGY 530


>gi|285019449|ref|YP_003377160.1| hypothetical protein XALc_2689 [Xanthomonas albilineans GPE PC73]
 gi|283474667|emb|CBA17166.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 686

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/325 (23%), Positives = 121/325 (37%), Gaps = 28/325 (8%)

Query: 41  WFWTLFYKRSKKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHG 100
           W     + R +     E  +V   + +     A           + D  R    P  +  
Sbjct: 376 WLRATIHTRLQ-GRRAEQRLVFVNAWNEWAEGAVLEPDTRLGHAYLDATRRALSPARVRE 434

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE 160
             +P                +VH +Y ++  E+ N L+  ++ + L VT   + AS    
Sbjct: 435 ATAPHHA-------------IVHAWYPNVLPELLNPLAASALPWRLLVTTSPDQASAVQA 481

Query: 161 ILKI--FPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDL 218
            L+   FP   + ++EN GRD+LPFL   E       D V K+H K+S         GD 
Sbjct: 482 QLRDCSFP-YEVMVLENRGRDILPFLHAGERLLQDGVDVVLKLHTKRSTHLH----NGDA 536

Query: 219 WRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTL 278
           WR  L   L G      +I+  F     +G++    +  P          G NR     L
Sbjct: 537 WRSELLQRLAG-ADRAARILEAFAQDPMLGLVAPEGHLLPL-----ADFWGGNRMAADYL 590

Query: 279 AGRMG-ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
             R G       +  F +G+MFWVR  AL P+ +  L           +DG + HA ER 
Sbjct: 591 LRRTGYTDVCLDEAHFISGSMFWVRLHALRPLLDSHLCPSEFEPEQGQIDGTLAHAAERV 650

Query: 338 FSLSVKKANFRISDVDCILGYRKSL 362
            +L  +   +R++    ++G     
Sbjct: 651 TALLAQHRGYRVATAAELIGAPSPP 675


>gi|262282406|ref|ZP_06060174.1| rhamnosyltransferase [Streptococcus sp. 2_1_36FAA]
 gi|262261697|gb|EEY80395.1| rhamnosyltransferase [Streptococcus sp. 2_1_36FAA]
          Length = 582

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 25/274 (9%)

Query: 94  FPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT 152
            P   +      +   + I+I   KIA+ +H++Y+DL  E  +   +   S+DL +T  +
Sbjct: 260 LPDYPYLLGRKILDLSLPISIPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDS 319

Query: 153 ESA--SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
           E     I   +      A + +  N GRDVLP L L     LS YDY+   H KKSK   
Sbjct: 320 EKKKNEILDILEGKQAKAEVLVTGNVGRDVLPMLKLKR--HLSQYDYIGHFHTKKSKEAD 377

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
           Y  W G+ WR+ L   L+       +I+        +G++ +     P+ +      +  
Sbjct: 378 Y--WAGESWRKELINMLVHPAD---QIVSQLGQDDRLGLVIADI---PSFFRFNRIVVAW 429

Query: 271 NREM----ICTLAGRMGI--TFQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPK 321
           N  +    +  L  RM        ++++ F    GT  W + +AL P+ +L L+    P 
Sbjct: 430 NEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNLTEEDVPS 489

Query: 322 VHKALDGEIEHAVERCFSLSV--KKANFRISDVD 353
                   I HA+ER        K+ +F+IS   
Sbjct: 490 EPLP-QNSILHAIERLLVYIAWDKQYDFKISYNQ 522


>gi|298290915|ref|YP_003692854.1| Rhamnan synthesis F [Starkeya novella DSM 506]
 gi|296927426|gb|ADH88235.1| Rhamnan synthesis F [Starkeya novella DSM 506]
          Length = 633

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 110/258 (42%), Gaps = 16/258 (6%)

Query: 101 WESPAMGK-VMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA-SIK 158
           W  P  G     +A   K+ +  H +Y DL  E+   L+  +   DL +T  T +     
Sbjct: 378 WAVPVFGPPAAPVASPLKVGLHGHFFYPDLLPELLERLAANASRPDLFLTTDTPAKVEQL 437

Query: 159 SEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEG 216
             +   +P   RI ++ N GRD+ PFL  L        YD +  +HGKK+K  G     G
Sbjct: 438 RALTAAWPAKVRIDVVPNSGRDIGPFLTALRDVLTGGEYDVLLHLHGKKTK--GRRRAIG 495

Query: 217 DLWRRWLFYDLLGAPGVVFK-IIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMI 275
           D WR +L+ +L+G    +   ++     H  +G++             +     +N  ++
Sbjct: 496 DPWRNFLWENLIGGDHPMLDAVLAYMAAHPQVGLVYPE--------DTHLLDWARNGRVV 547

Query: 276 CTLAGRMGITFQ-DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAV 334
             L   MG+T      +DF  G MF VR  AL P+  L L     P     LDG + H +
Sbjct: 548 EELRRDMGLTEPMGTYVDFPVGNMFAVRPAALAPVLALDLKWSDYPVEPIPLDGTVLHGI 607

Query: 335 ERCFSLSVKKANFRISDV 352
           ER     V+KA F  + V
Sbjct: 608 ERLLPTVVRKAGFTTAAV 625


>gi|195977971|ref|YP_002123215.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|195974676|gb|ACG62202.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
          Length = 581

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 22/276 (7%)

Query: 93  HFPQLLHGWESPAMG-KVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           H P   +      +  + + IA   KIA+ +H++Y DL  E     S+    +DL +T  
Sbjct: 260 HLPDAKYLLAHKYLSNQPISIAPSKKIAVHLHVFYADLLSEFLEAFSHFHFDYDLLITTD 319

Query: 152 T--ESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK 209
           +  + A IK  + +   +A I +  N GRDVLP L L   E+LS YDY+   H KKSK  
Sbjct: 320 SKAKKAEIKEILRESGASADILVTGNIGRDVLPMLTL--KERLSQYDYIGHFHTKKSKEA 377

Query: 210 GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLG 269
            +  W G  WR  L   ++       +I+        IG++ +    +  ++     +  
Sbjct: 378 DF--WAGQSWRTELIDMMVKPAD---QILTALAAD-AIGIVIADIPSF-FRFNKIVDAWN 430

Query: 270 KN--REMICTLAGRMGIT--FQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKV 322
           ++     +  L   MG+T     Q +D F    GT  W + +AL P+ +L L+    P  
Sbjct: 431 EHLIAPEMNQLWQAMGLTKRIDFQTMDTFVMSYGTFVWFKYDALKPLFDLGLNEADIPAE 490

Query: 323 HKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
                  I HA+ER        +  +FRIS  + +L
Sbjct: 491 PLP-QNSILHAIERLLIYIAWDRHYDFRISRNEKLL 525


>gi|222152862|ref|YP_002562039.1| rhamnan synthesis protein F family protein [Streptococcus uberis
           0140J]
 gi|222113675|emb|CAR41606.1| rhamnan synthesis protein F family protein [Streptococcus uberis
           0140J]
          Length = 585

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 78/275 (28%), Positives = 123/275 (44%), Gaps = 24/275 (8%)

Query: 93  HFPQLLHGWESPAMGKVMQIAIK---AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVT 149
           H+P   +      + K  +  +K     IA+ +H++Y+DL  E  +  ++    FDL++T
Sbjct: 260 HYPDAPYLLSQKYLEKQEESDLKVSEHSIAVHLHVFYVDLLEEFLHAFTSFKFPFDLYIT 319

Query: 150 LV-TESASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSK 207
              +E  S    IL  F  +A+I +  N GRDVLP L L   ++LS YDY+   H KKSK
Sbjct: 320 TDKSEKESEIKAILDSFRVSAKIVVTGNIGRDVLPMLKL--KDELSQYDYIGHFHTKKSK 377

Query: 208 RKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCS 267
              +  W G+ WR  L   L+        II  F+    IG+I +    +  ++      
Sbjct: 378 EADF--WAGESWRNELIDMLIKPANT---IINQFE-DPAIGIIIADIPSF-FRFNKIVTP 430

Query: 268 LGKN--REMICTLAGRMGI--TFQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEP 320
           L ++     +  L  +M +  T   ++ D F    GT  W + +AL P+ +L L     P
Sbjct: 431 LNEHLIAPEMNKLWEKMNLSKTIDFEQFDTFVMSYGTFVWFKYDALKPLFDLNLKDGDVP 490

Query: 321 KVHKALDGEIEHAVERCFSLSV--KKANFRISDVD 353
           K        I HAVER           +FRI+  +
Sbjct: 491 KEPLP-QNSILHAVERLLIYIAWDSHFDFRIAKNN 524


>gi|298346187|ref|YP_003718874.1| hypothetical protein HMPREF0573_11061 [Mobiluncus curtisii ATCC
           43063]
 gi|304390053|ref|ZP_07372007.1| group 2 glycosyl transferase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|298236248|gb|ADI67380.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
 gi|304326535|gb|EFL93779.1| group 2 glycosyl transferase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 680

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKIFPAAR--- 169
             ++A+V+H+YY DL  EI   LSN+ + FD+ +T  +  +   +  +I +  P  +   
Sbjct: 49  DCRLAVVMHVYYPDLVTEIVQRLSNIPVEFDMFITNASGADLPLLPQQIHERLPLLKHLV 108

Query: 170 IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK---GYSWWEGDLWRRWLFYD 226
           +  +ENHGRD+ P + L+    L  Y  + K+H KKS  +         G  W+      
Sbjct: 109 VVPVENHGRDIFPLVQLVNFGALDPYQLILKVHTKKSAWRENHPDLEGSGAQWKDEFLDA 168

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
           LLG+   V KI+  F     +G++ +       ++       G ++ +   L  R+ +  
Sbjct: 169 LLGSKDSVEKIMSAFGADPWLGLVTAPGNIVGPQF------WGGDQALTAELLRRLEMQL 222

Query: 287 QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
           +  KL F AG+M+WVR   +  +++L LS          +D    HA+ER   +   +A 
Sbjct: 223 KPSKLKFAAGSMYWVRGFVIQGLRSLGLSATDFETEAGQIDATTAHALERAIGILTTEAG 282

Query: 347 FRISDVDCIL 356
            ++ + + + 
Sbjct: 283 LKLRETNQLA 292


>gi|315654770|ref|ZP_07907675.1| group 2 glycosyl transferase [Mobiluncus curtisii ATCC 51333]
 gi|315490731|gb|EFU80351.1| group 2 glycosyl transferase [Mobiluncus curtisii ATCC 51333]
          Length = 680

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 14/250 (5%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKIFPAAR--- 169
             ++A+V+H+YY DL  EI   LSN+ + FD+ +T  +  +   +  +I +  P  +   
Sbjct: 49  DCRLAVVMHVYYPDLVTEIVQRLSNIPVEFDMFITNASGADLPLLPQQIHERLPLLKHLV 108

Query: 170 IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSW---WEGDLWRRWLFYD 226
           +  +ENHGRD+ P + L+    L  Y  + K+H KKS  +         G  W+      
Sbjct: 109 VVPVENHGRDIFPLVQLVNFGALDPYQLILKVHTKKSAWRESHPDLEGSGAQWKDEFLDA 168

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
           LLG+   V KI+  F +   +G++ +       ++       G ++ +   L  R+ +  
Sbjct: 169 LLGSKDSVEKIMSAFGSDPWLGLVTAPGNIVGPQF------WGGDQALTAELLRRLEMQL 222

Query: 287 QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
           +  KL F AG+M+WVR   +  +++L LS          +D    HA+ER   +   +A 
Sbjct: 223 KPSKLKFAAGSMYWVRGFVIQGLRSLGLSATDFETEAGQIDATTAHALERAIGILTTEAG 282

Query: 347 FRISDVDCIL 356
            ++ + + + 
Sbjct: 283 LKLRETNQLA 292


>gi|225870347|ref|YP_002746294.1| rhamnan synthesis protein F family protein [Streptococcus equi
           subsp. equi 4047]
 gi|225699751|emb|CAW93520.1| rhamnan synthesis protein F family protein [Streptococcus equi
           subsp. equi 4047]
          Length = 581

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 21/262 (8%)

Query: 106 MGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILK 163
             + + I    KIA+ +H++Y+DL  E     S+    +DL +T  +  + A IK  + +
Sbjct: 274 PEQPISIDQSKKIAVHLHVFYVDLLSEFLEAFSHFHFDYDLLITTDSKAKKAEIKEILRE 333

Query: 164 IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWL 223
              +A I +  N GRDVLP L L   E+LS YDY+   H KKSK   +  W G  WR  L
Sbjct: 334 SGASADILVTGNIGRDVLPMLTL--KERLSQYDYIGHFHTKKSKEADF--WAGQSWRTEL 389

Query: 224 FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN--REMICTLAGR 281
              ++       +I+        IG++ +    +  ++     +  ++     +  L   
Sbjct: 390 IDMMVKPAD---QILTALAAD-AIGIVIADIPSF-FRFNKIVDAWNEHLIAPEMNQLWQA 444

Query: 282 MGIT--FQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
           MG+T     Q +D F    GT  W + +AL P+ +L LS    P    +    I HA+ER
Sbjct: 445 MGLTKRIDFQTMDTFVMSYGTFVWFKYDALKPLFDLDLSEADIPAEPLS-QNSILHAIER 503

Query: 337 CFSLSV--KKANFRISDVDCIL 356
                   +  +FRIS  + +L
Sbjct: 504 LLIYIAWDRHYDFRISRNEKLL 525


>gi|134297301|ref|YP_001121036.1| lipopolysaccharide biosynthesis protein-like protein [Burkholderia
            vietnamiensis G4]
 gi|134140458|gb|ABO56201.1| Lipopolysaccharide biosynthesis protein-like protein [Burkholderia
            vietnamiensis G4]
          Length = 1231

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 81/322 (25%), Positives = 133/322 (41%), Gaps = 12/322 (3%)

Query: 36   GGFFFWFWTLFYKRSKKLCYDENYVVAYGSRS-GKKFFAQSNLYMMERELHFDGQRIHHF 94
              +  W    F          E  V         +  + + +       LH     +  +
Sbjct: 915  ESYKSWLRRCFDFVLSNNKQSERLVFINAWNEWAEGTYLEPDRRYGYAYLHATADLLRQY 974

Query: 95   PQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE- 153
                   ES  +    +   K + A+V HLYY DL  E+ +L+   +++ D  +T+    
Sbjct: 975  YNSEDLDESIKINN-QRFVKKNENALVAHLYYFDLLPELLSLIER-NVNLDAFITIPVHF 1032

Query: 154  SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSW 213
            S     EIL       +  ++N GRD+LPFL +    +  +Y  + K+H KKS ++    
Sbjct: 1033 SREQVGEILASLDNVYVLRVQNRGRDILPFLNIYPIIKSYSYANLVKVHSKKSPQRA--- 1089

Query: 214  WEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNRE 273
             +G L R+    +LL  P +V  ++R  +T   IG+I            DY  +   NR+
Sbjct: 1090 -DGALLRKRALLELL-DPSIVPGVLRALNTDPKIGLIAPSNSLCSLSNSDYLIN---NRK 1144

Query: 274  MICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
             +     R+G+       +F AG+MFW R +AL  + +L L      +    LDG + HA
Sbjct: 1145 QLNYCLSRLGLVDSSLNFEFIAGSMFWARVDALRMLSDLSLREEDFEEELGQLDGTLAHA 1204

Query: 334  VERCFSLSVKKANFRISDVDCI 355
            +ER F    K   +R   VD I
Sbjct: 1205 IERLFCFLGKHVGYRTLPVDQI 1226


>gi|148927812|ref|ZP_01811237.1| Lipopolysaccharide biosynthesis protein-like protein [candidate
           division TM7 genomosp. GTL1]
 gi|147886838|gb|EDK72383.1| Lipopolysaccharide biosynthesis protein-like protein [candidate
           division TM7 genomosp. GTL1]
          Length = 498

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 15/242 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA--SIKSEILKIFPAARIHIME 174
           ++A+VVH++Y +L  EI +++ N+   FDL +T   E A   +      +  +  I + E
Sbjct: 240 RLAVVVHIFYPELANEIYDVIKNIVEPFDLIITTPHEGAVSELIDTFAPLASSVAIALSE 299

Query: 175 NHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVV 234
           N GRDV PFL +  +  L  YD V K+H KKS         G  W++ LF  L G   +V
Sbjct: 300 NRGRDVGPFLAVHRSGLLERYDAVLKLHSKKSTYSD----SGQQWQQSLFRQLCGNSQIV 355

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRM---GITFQDQKL 291
            + +         GM+G   Y     Y  +    G NR  +  L   +    +  +D  L
Sbjct: 356 RRSVALL-RDGKTGMVGPHDY-----YLTHPHYWGANRPAVHKLLQSLTATPLKEEDVPL 409

Query: 292 DFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISD 351
            FFAGTMFW   +A+  + ++  +       +   DG + HA+ER F +  +   + ++ 
Sbjct: 410 RFFAGTMFWFAPKAIVALHDIPEALLNFESENGKQDGTLAHALERLFGIVPQLGGYNVTS 469

Query: 352 VD 353
           + 
Sbjct: 470 LA 471


>gi|315657309|ref|ZP_07910191.1| group 2 glycosyl transferase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315491781|gb|EFU81390.1| group 2 glycosyl transferase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 680

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 14/250 (5%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKIFPAAR--- 169
             ++A+V+H+YY DL  EI   LSN+ + FD+ +T  +  +   +  +I +  P  +   
Sbjct: 49  DCRLAVVMHVYYSDLVTEIVQRLSNIPVEFDMFITNASGADLPLLPQQIHERLPLLKHLV 108

Query: 170 IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSW---WEGDLWRRWLFYD 226
           +  +ENHGRD+ P + L+    L  Y  + K+H KKS  +         G  W+      
Sbjct: 109 VVPVENHGRDIFPLVQLVNFGALDPYQLILKVHTKKSAWRESHPDLEGSGAQWKDEFLDA 168

Query: 227 LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
           LLG+   V KI+  F +   +G++ +       ++       G ++ +   L  R+ +  
Sbjct: 169 LLGSKDSVEKIMSAFGSDPWLGLVTAPGNIVGPQF------WGGDQALTAELLRRLEMQL 222

Query: 287 QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
           +  KL F AG+M+WVR   +  +++L LS          +D    HA+ER   +   +A 
Sbjct: 223 KPSKLKFAAGSMYWVRGFVIQGLRSLGLSATDFETEAGQIDATTAHALERAIGILTTEAG 282

Query: 347 FRISDVDCIL 356
            ++ + + + 
Sbjct: 283 LKLRETNQLA 292


>gi|190572709|ref|YP_001970554.1| putative glycosyltransferase protein [Stenotrophomonas maltophilia
           K279a]
 gi|190010631|emb|CAQ44240.1| putative glycosyltransferase protein [Stenotrophomonas maltophilia
           K279a]
          Length = 707

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 11/257 (4%)

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE-SASIKSEILKIFPAA 168
              A  ++  IV+H +Y+D   E+   + +  +   L +T   E  A ++S I      A
Sbjct: 453 PSQAAPSRPCIVIHAWYLDALPELLQAVKDSGLQARLVITTTGERQAQVQSIIDAEGLTA 512

Query: 169 RIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLL 228
            I + +NHGRDVLPFL   +     N   V K+H K+S  +      GD WRR +   LL
Sbjct: 513 EIWVYDNHGRDVLPFLHAADRLLQQNESLVLKLHTKRSTHRD----NGDQWRREMVDALL 568

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD 288
           G       +      +  IG++    +            +G N + +  L   +G+    
Sbjct: 569 GTAQAAANLAHL-LANPSIGLMAPAGHLL-----KVADYIGGNAQRMERLWALLGLDSAP 622

Query: 289 QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
               F +G+MFWVR  AL P+ +  L           +DG + HA+ER     V  A F 
Sbjct: 623 GDGQFASGSMFWVRLPALRPLLDAHLLPSMFDTEAGQIDGTLAHAIERATGAVVSAAGFT 682

Query: 349 ISDVDCILGYRKSLSQN 365
           ++D   + G     S +
Sbjct: 683 VADTSEVEGAPPRASSS 699


>gi|302337197|ref|YP_003802403.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
 gi|301634382|gb|ADK79809.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
          Length = 1100

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 84/305 (27%), Positives = 128/305 (41%), Gaps = 43/305 (14%)

Query: 42  FWTLFYKRS-----KKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQ 96
           F TLFY RS     +K      + +  G R G +     N +M+ER+  F    +  FP 
Sbjct: 128 FDTLFYLRSYPDVAEKGVNPLGHYIKIGWRKGNR----PNPFMVERDCTF----LPAFPL 179

Query: 97  LLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESA 155
             H   S              I +V H+Y+ DL       +S++   FDL VT    E+ 
Sbjct: 180 QDHSALS--------------IVVVFHIYHEDLVGSCLQYISHIPYPFDLIVTTPLEENN 225

Query: 156 SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWE 215
               ++  ++P A I   +N GRD+ PFL +   +++  YD  CK+H KK      +   
Sbjct: 226 DAILQVKSLYPDAEIVRSKNAGRDIGPFLQVW--DRVLQYDLCCKVHTKK-----GNSAY 278

Query: 216 GDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMI 275
            ++WR      +L     V  I+R F+    + + G+        Y  Y   LGKN+++ 
Sbjct: 279 SEIWRDLSLRGILETVDTVHGILRMFEQEDSLALAGAELL-----YGSYQFLLGKNKDLS 333

Query: 276 CTLAGRMGITFQD-QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAV 334
            +L     I         FF GTMFW+R +    I    L +   P      DG+ EHA+
Sbjct: 334 NSLIKDYNIPVNSYSNNGFFMGTMFWMRVK--KFIFLSNLKQLQFPIEDGKNDGKYEHAL 391

Query: 335 ERCFS 339
           ER   
Sbjct: 392 ERLLG 396


>gi|157151529|ref|YP_001450315.1| rhamnosyltransferase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|157076323|gb|ABV11006.1| rhamnosyltransferase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 582

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 25/274 (9%)

Query: 94  FPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT 152
            P   +      +   + I++   KIA+ +H++Y+DL  E  +   +   S+DL +T  +
Sbjct: 260 LPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDS 319

Query: 153 ESA--SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG 210
           E     I   +      A + +  N GRDVLP L L     LS YDY+   H KKSK   
Sbjct: 320 EKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKR--HLSQYDYIGHFHTKKSKEAD 377

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
           Y  W G+ WR+ L   L+       +I+        +G++ +     P+ +      +  
Sbjct: 378 Y--WAGESWRKELINMLVHPAD---QIVSQLGQDDCLGLVIADI---PSFFRFNRIVVAW 429

Query: 271 NREM----ICTLAGRMGI--TFQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPK 321
           N  +    +  L  RM        ++++ F    GT  W + +AL P+ +L ++    P 
Sbjct: 430 NEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPS 489

Query: 322 VHKALDGEIEHAVERCFSLSV--KKANFRISDVD 353
                   I HA+ER        K+ +F+IS   
Sbjct: 490 EPLP-QNSILHAIERLLVYIAWDKQYDFKISYNQ 522


>gi|13476282|ref|NP_107852.1| hypothetical protein mlr7561 [Mesorhizobium loti MAFF303099]
 gi|14027043|dbj|BAB53997.1| mlr7561 [Mesorhizobium loti MAFF303099]
          Length = 609

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 13/247 (5%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKIFP--AARI 170
             +IA++ H+Y++D+  EI     N+   +DL VT     + A I+  I K      A +
Sbjct: 296 DCRIAVLAHVYHLDMIDEILGYAENVPKGYDLIVTTDNADKQALIQQAIAKATNASNAVV 355

Query: 171 HIMENHGRDVLPFLILLETEQL-SNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
            ++ N GRD    L+      L   YD +C++H K+S + G     G+L++   F +LL 
Sbjct: 356 LVVRNDGRDTSALLVGCRDYVLEDRYDLICRVHSKRSPQDGPR---GELFKLHTFENLLH 412

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGI--TFQ 287
            PG V  ++  F  +  +G++          Y     S   N+  +  LA ++G+     
Sbjct: 413 TPGYVSNLLELFANNPALGLVMP--PLVHIGYPTIGNSWAGNKANVAKLARQLGLIVHLD 470

Query: 288 DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
           D       G M+W R  AL  +   R +      +    DG + HA+ER  +     A +
Sbjct: 471 DSTPVAPYGGMYWFRPAALRKLFEERWNWNDFANMD-YRDGSLVHAIERIIAYVAIDAGY 529

Query: 348 RISDVDC 354
               V  
Sbjct: 530 TFRHVMT 536


>gi|323135560|ref|ZP_08070643.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
 gi|322398651|gb|EFY01170.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
          Length = 812

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 14/262 (5%)

Query: 96  QLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ES 154
           ++    E+P      + A +  IA +VH +Y ++   +   L N++   DL  +  T E 
Sbjct: 126 EMDFALETP-FAFAPKPARERPIAAIVHGFYPEIAPLVLEKLKNVTGPVDLFFSTDTQEK 184

Query: 155 ASIKSEILKIFPA--ARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYS 212
                ++ + +P     I I  N GRD+         +  ++YD    +H K+S   G +
Sbjct: 185 KHALEDVCRDWPKGRVEIRICPNRGRDIAAKFFGFR-DVYADYDLFIHLHTKRSPHGGAA 243

Query: 213 WWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR 272
                 WR +LF +LLG+P +V  I+  F     IG++  +             + G + 
Sbjct: 244 LAR---WRDYLFDNLLGSPEIVNSILSLF-DDPKIGVVFPQHLFELRGI----LNWGYDY 295

Query: 273 EMICTLAGRMGITFQDQ-KLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIE 331
           +    L  RMG+       L+F +G+MFW R+ A  P+ +L +     P+    +DG + 
Sbjct: 296 DHARALMKRMGVEIDKNLVLEFPSGSMFWGRSAAFRPLLDLDIDFDDFPQEGGQVDGTLA 355

Query: 332 HAVERCFSLSVKKANFRISDVD 353
           HA+ER   +  +   F    V 
Sbjct: 356 HAIERSLLMIAESRGFEWLKVA 377


>gi|312962408|ref|ZP_07776899.1| lipopolysaccharide biosynthesis protein-like protein [Pseudomonas
            fluorescens WH6]
 gi|311283335|gb|EFQ61925.1| lipopolysaccharide biosynthesis protein-like protein [Pseudomonas
            fluorescens WH6]
          Length = 1308

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 81/253 (32%), Positives = 134/253 (52%), Gaps = 20/253 (7%)

Query: 106  MGKVMQIAIKAKI-----AIVVHLYYIDLWIEIANLLSNLS-ISFDLHVTLVTESASIKS 159
            + KV ++A K  +     A+V+HL+Y DLW +I + L +   + +DL+VT+ + SA ++ 
Sbjct: 1070 ISKVSRMAFKRSVRQADYAVVLHLHYDDLWDDIKSYLDSFGQLEYDLYVTVTSSSAGVR- 1128

Query: 160  EILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLW 219
             + + +P A I ++EN GRDVLPFL +L+  +   Y  VCKIH K+S  +     +GD  
Sbjct: 1129 -VAQEYPKAHIQLVENRGRDVLPFLKILQVIKDMGYVAVCKIHSKRSLYRD----DGDKI 1183

Query: 220  RRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLA 279
            R  L   LLG+   +  ++  F+  +DIG+I    Y  P+   + T        ++  L+
Sbjct: 1184 RGELIGSLLGSKETILSVVDRFERQKDIGVIVPVKYLIPHTDHNMTYC----GAIVTELS 1239

Query: 280  GRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
             ++G  F     +F AG+MFW R +AL+ + ++  S           DG I H +ER   
Sbjct: 1240 SKLGFNF--SYCEFIAGSMFWFRPKALEALLSIDESS--FEVEDGLADGTIAHGIERVLC 1295

Query: 340  LSVKKANFRISDV 352
              VKKAN+ +  +
Sbjct: 1296 NVVKKANYTVETI 1308


>gi|281490695|ref|YP_003352675.1| bifunctional alpha-L-Rha
           alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Lactococcus lactis
           subsp. lactis KF147]
 gi|281374464|gb|ADA63985.1| Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Lactococcus lactis
           subsp. lactis KF147]
          Length = 589

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 21/288 (7%)

Query: 81  ERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNL 140
            + L  D      +P L     S  +  + +  +   +A+ +H+YY +L  E  +   N 
Sbjct: 252 PKSLVVDHLSTIGYPDLNFLLPSKMITSLSKTVLHQTVAVHLHVYYPELLEEFLDAFKNF 311

Query: 141 SISFDLHVTLVT-ESASIKSEILKIFPA-ARIHIMENHGRDVLPFLILLETEQLSNYDYV 198
           S  +DL++T  T E   I  E+LK   A A++    NHGRD++PFL L   E+L  YD V
Sbjct: 312 SFDYDLYLTTNTDEKEEIIKEMLKCKDARAKLVRTPNHGRDIVPFLAL--KEELKKYDIV 369

Query: 199 CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYP 258
              H K+S    +  + G+ WR  L   L+        I+  F+  + +G++ +    + 
Sbjct: 370 GHFHTKRSLEAAF--FAGESWRTELISMLI---EPADNIMAHFEQKQKLGIVIADIPSF- 423

Query: 259 NKYCDYTCSLGKNR---EMICTLAGRMGITFQDQKLDFF-----AGTMFWVRTEALDPIK 310
            ++     +  +N+    ++  +  RM +  +    DF       GT FW +TE L+P+ 
Sbjct: 424 FRFNKIVNADNENKQIAPIMNDIWKRMKMNKKVNFHDFNTFTMSYGTFFWAKTEVLEPLF 483

Query: 311 NLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
           NL +     P         I HA+ER        K+ +F+IS     L
Sbjct: 484 NLEIMDREIPNEPLP-QNTILHAIERVLIYLAWDKEMDFKISPNKLNL 530


>gi|15674835|ref|NP_269009.1| hypothetical protein SPy_0792 [Streptococcus pyogenes M1 GAS]
 gi|71910421|ref|YP_281971.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS5005]
 gi|13621968|gb|AAK33730.1| conserved hypothetical protein - possibly involved in cell wall
           localization and side chain formation of
           rhamnose-glucose polysaccharide [Streptococcus pyogenes
           M1 GAS]
 gi|71853203|gb|AAZ51226.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS5005]
          Length = 581

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      N +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFENWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T       G      P+ +         N  +I      L  +M +     
Sbjct: 399 --SILSAFETDDI----GIIIADIPSFFRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 DSYDFRI 518


>gi|32455988|ref|NP_861990.1| rb115 [Ruegeria sp. PR1b]
 gi|22726340|gb|AAN05136.1| RB115 [Ruegeria sp. PR1b]
          Length = 963

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 18/263 (6%)

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEI-------L 162
                K ++ + +HLYY+D+  E+  LL+ L ++F+L ++L   +     E+       L
Sbjct: 149 QPPLPKGRLVVQLHLYYVDMAAEMIALLARLPVTFELLLSLPETAVVADEEMISLFRAGL 208

Query: 163 KIFPAARIHIMENHGRDVLPFLILLETEQ--LSNYDYVCKIHGKKSKRKGYSWWEGDLWR 220
           +   A  +  + N GRDV P+++   +E   L++ D V  +H KKS    Y       W 
Sbjct: 209 ERLGAITLRRVPNRGRDVAPWMVSFRSELRALADRDLVLHLHSKKSPHGNYHVG----WG 264

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAG 280
           R+L + LLG+  V  +++  F    ++G++    +    +  +Y    GK  ++   L  
Sbjct: 265 RYLGHSLLGSTAVAAQMLGLFAEDPELGLVAPAYWPALRRAPNY----GKVGDLCAHLFR 320

Query: 281 RMGI-TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
           RMG+        DF AG+ F  R   L P   L L     P     + G + HAVER   
Sbjct: 321 RMGLGEVDPICADFPAGSFFCARAAVLRPFLTLGLEARDFPAEAGQICGTLAHAVERLLG 380

Query: 340 LSVKKANFRISDVDCILGYRKSL 362
               +   R   V   L + ++ 
Sbjct: 381 QVPARLGLRFDMVAVDLPFEEAA 403


>gi|15672189|ref|NP_266363.1| polysaccharide biosynthesis protein [Lactococcus lactis subsp.
           lactis Il1403]
 gi|12723062|gb|AAK04305.1|AE006258_8 polysaccharide biosynthesis protein [Lactococcus lactis subsp.
           lactis Il1403]
          Length = 589

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 21/288 (7%)

Query: 81  ERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNL 140
            + L  D      +P L     S  +  + +  +   +A+ +H+YY +L  E  +   N 
Sbjct: 252 PKSLVVDHLSTVGYPDLNFLLPSKMITPLSKTVLHQTVAVHLHVYYPELLEEFLDAFKNF 311

Query: 141 SISFDLHVTLVT-ESASIKSEILKIFP-AARIHIMENHGRDVLPFLILLETEQLSNYDYV 198
           S  +DL++T  T E   I  E+LK     A++    NHGRD++PFL L   E+L  YD V
Sbjct: 312 SFDYDLYLTTNTDEKEEIIKEMLKCKDAKAKLVRTPNHGRDIVPFLAL--KEELKKYDIV 369

Query: 199 CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYP 258
              H K+S    +  + G+ WR  L   L+        I+  F+  + +G++ +    + 
Sbjct: 370 GHFHTKRSLEAAF--FAGESWRTELISMLI---EPADNIMAHFEQKQKLGIVIADIPSF- 423

Query: 259 NKYCDYTCSLGKNR---EMICTLAGRMGITFQDQKLDFF-----AGTMFWVRTEALDPIK 310
            ++     +  +N+    ++  +  RM +  +    DF       GT FW + E L+P+ 
Sbjct: 424 FRFNKIVNADNENKQIAPIMNDIWKRMKMNKKVNFHDFNTFTMSYGTFFWAKIEVLEPLF 483

Query: 311 NLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANFRISDVDCIL 356
           NL +     P         I HA+ER        K+ +F IS     L
Sbjct: 484 NLEIMDREIPNEPLP-QNTILHAIERVLIYLAWDKEMDFNISPNKLNL 530


>gi|209559162|ref|YP_002285634.1| RgpFc protein [Streptococcus pyogenes NZ131]
 gi|209540363|gb|ACI60939.1| RgpFc protein [Streptococcus pyogenes NZ131]
          Length = 581

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T       G      P+ +         N  +I      L  +M +     
Sbjct: 399 --SILSAFETDDI----GIIIADIPSFFRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 NSYDFRI 518


>gi|306827605|ref|ZP_07460885.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes ATCC 10782]
 gi|304430168|gb|EFM33197.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes ATCC 10782]
          Length = 581

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T       G      P+ +         N  +I      L  +M +     
Sbjct: 399 --SILSAFETDDI----GIIIADIPSFFRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 NSYDFRI 518


>gi|56808559|ref|ZP_00366292.1| COG3754: Lipopolysaccharide biosynthesis protein [Streptococcus
           pyogenes M49 591]
          Length = 581

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T       G      P+ +         N  +I      L  +M +     
Sbjct: 399 --SILSAFETDDI----GIIIADIPSFFRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 NSYDFRI 518


>gi|19745874|ref|NP_607010.1| hypothetical protein spyM18_0853 [Streptococcus pyogenes MGAS8232]
 gi|19748025|gb|AAL97509.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 581

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T       G      P+ +         N  +I      L  +M +     
Sbjct: 399 --SILSAFETDDI----GIIIADIPSFFRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 NSYDFRI 518


>gi|139474025|ref|YP_001128741.1| rhamnan synthesis protein F family protein [Streptococcus pyogenes
           str. Manfredo]
 gi|134272272|emb|CAM30524.1| rhamnan synthesis protein F family protein [Streptococcus pyogenes
           str. Manfredo]
          Length = 581

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 25/247 (10%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPAD- 398

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT----LAGRMGIT--FQ 287
              I+  F+T       G      P+ +         N  +I      L  +M +     
Sbjct: 399 --SILSAFETDDI----GIIIADIPSFFRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQID 452

Query: 288 DQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV-- 342
            Q +D F    GT  W + +AL  + +L L++   P         I HA+ER        
Sbjct: 453 FQAMDTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLLVYIAWG 511

Query: 343 KKANFRI 349
              +FRI
Sbjct: 512 NSYDFRI 518


>gi|71903253|ref|YP_280056.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS6180]
 gi|71802348|gb|AAX71701.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
           pyogenes MGAS6180]
          Length = 581

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 17/243 (6%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPADS 399

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT--FQDQKL 291
           +  +  T D    I       +R+      +   L    + + +L  +M +      Q +
Sbjct: 400 ILSVFETDDIGIII-ADIPSFFRFNKIVNAWNEHLI--AQEMMSLWRKMDVKKQIDFQAM 456

Query: 292 DFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKAN 346
           D F    GT  W + +AL  + +L L++   P         I HA+ER F         +
Sbjct: 457 DTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLFVYIAWGNSYD 515

Query: 347 FRI 349
           FRI
Sbjct: 516 FRI 518


>gi|94994091|ref|YP_602189.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS10750]
 gi|94547599|gb|ABF37645.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
           MGAS10750]
          Length = 581

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 17/243 (6%)

Query: 116 AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIM 173
            K+A+ +H++Y+DL  E      + +  +DL +T  ++     IK  + +    A I + 
Sbjct: 284 QKVAVHLHVFYVDLLDEFLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVT 343

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
            N GRD+ P L+L   ++LS YDY+   H KKSK   +  W G+ WR+ L   L+     
Sbjct: 344 GNRGRDIYPMLLL--KDKLSQYDYIGHFHTKKSKEADF--WAGESWRKELIDMLVKPADS 399

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT--FQDQKL 291
           +  +  T D    I       +R+      +   L    + + +L  +M +      Q +
Sbjct: 400 ILSVFETDDIGIII-ADIPSFFRFNKIVNAWNEHLI--AQEMMSLWRKMDVKKQIDFQAM 456

Query: 292 DFFA---GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKAN 346
           D F    GT  W + +AL  + +L L++   P         I HA+ER F         +
Sbjct: 457 DTFVMSYGTFVWFKYDALKSLFDLELTQNDIPSEPLP-QNSILHAIERLFVYIAWGNSYD 515

Query: 347 FRI 349
           FRI
Sbjct: 516 FRI 518


>gi|296135664|ref|YP_003642906.1| glycosyl transferase family 2 [Thiomonas intermedia K12]
 gi|295795786|gb|ADG30576.1| glycosyl transferase family 2 [Thiomonas intermedia K12]
          Length = 1414

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 88/329 (26%), Positives = 132/329 (40%), Gaps = 30/329 (9%)

Query: 43  WTLFYKRSKKLCYDENY-----VVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQL 97
            + F++ ++   +  N      VV   +    +      ++   R      +     P  
Sbjct: 198 DSRFFQTTRPTVFPANLETEHLVVKNVTADEYQQLTSLQVFYRARPNPAQNRIF--IPTR 255

Query: 98  LHGWESPAMGKVMQIAIKAK----IAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE 153
                 P       +          A+++HLYY DLW E    L  L    D++V+L   
Sbjct: 256 AASAAQPVQVPSPVLHAGRPHGNGTAVLLHLYYPDLWPEFLAHLKTLPAPCDVYVSLSEG 315

Query: 154 SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG--- 210
              + ++I++  P A +    N GRD+ P L LL   +  NY  +  +HGKKS       
Sbjct: 316 REELLTDIVRDLPDAVVMRHPNKGRDIAPRLALLRLARAHNYKQLLFLHGKKSPHLKEVE 375

Query: 211 ------YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
                     +GD WRR L   LL A     K I  F     +G+IG   +    +    
Sbjct: 376 NIHIPFLQHKDGDRWRRELLAALLDASE---KTIAAFAQQPKLGLIGPHGFWLGLRG--- 429

Query: 265 TCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHK 324
                 N   +   A RMGIT    +  +FAG+MFW R +ALDP+  L L          
Sbjct: 430 ----DANFPRLSAQAQRMGITPDPARHGYFAGSMFWCRPQALDPLLALDLKDADFEDETG 485

Query: 325 ALDGEIEHAVERCFSLSVKKANFRISDVD 353
             DG + H VER F+LS +KA F+I+D  
Sbjct: 486 QTDGTLAHVVERLFALSAEKAGFQIADTA 514


>gi|116511036|ref|YP_808252.1| lipopolysaccharide biosynthesis protein [Lactococcus lactis subsp.
           cremoris SK11]
 gi|116106690|gb|ABJ71830.1| Lipopolysaccharide biosynthesis protein [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 588

 Score =  225 bits (574), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 24/285 (8%)

Query: 94  FPQLLHGWESPAMGKVMQIAIKA--KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           +P   +  E   +    +++ K   KI I +H +Y+DL  E  N       ++DL++T  
Sbjct: 274 YPDREYMLEEKTLKFTKEVSAKTNLKIGIHLHAFYLDLIPEYLNYFDKYVQNYDLYITTD 333

Query: 152 TESASIKSEILKIFPAARIH---IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
           TE      EILK +P  +I    +  N GRDVLP++ +  +E +++YD     H KKSK 
Sbjct: 334 TE--EKYEEILKNYPLPQIKKVIVTGNKGRDVLPWMQV--SELMTDYDLCGHFHTKKSKD 389

Query: 209 KGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL 268
               W  G+ WRR + Y LL        I + F+ +  +G+I +    +   +   T   
Sbjct: 390 ND--WIVGESWRRDIEYSLL---EPAQAIFQEFEKNPKLGLIIADVPSFFEHFYGPTYIT 444

Query: 269 GKNR-EMICTLAGRMGITFQDQ---KLDFFA--GTMFWVRTEALDPIKNLRLSRYFEPKV 322
            ++    +  +  ++      +   K  +    GTM W R +AL+ + N+ +     P+ 
Sbjct: 445 ERDIWPDMQEIWQKIDFENSKELKQKDSYVMSYGTMIWYRPQALNNLLNVNIQ-ADVPEE 503

Query: 323 HKALDGEIEHAVERCFSLS--VKKANFRISDVDCILGYRKSLSQN 365
                  I HA ER           +FRIS +    G+  + S N
Sbjct: 504 PLPY-NSILHAFERLLVYVSWANGYDFRISQIQTNNGFVANFSAN 547


>gi|269978088|ref|ZP_06185038.1| lipopolysaccharide biosynthesis protein [Mobiluncus mulieris 28-1]
 gi|306818459|ref|ZP_07452182.1| rhamnan synthesis protein F [Mobiluncus mulieris ATCC 35239]
 gi|307700705|ref|ZP_07637730.1| rhamnan synthesis protein F [Mobiluncus mulieris FB024-16]
 gi|269933597|gb|EEZ90181.1| lipopolysaccharide biosynthesis protein [Mobiluncus mulieris 28-1]
 gi|304648632|gb|EFM45934.1| rhamnan synthesis protein F [Mobiluncus mulieris ATCC 35239]
 gi|307613700|gb|EFN92944.1| rhamnan synthesis protein F [Mobiluncus mulieris FB024-16]
          Length = 613

 Score =  225 bits (574), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 115/256 (44%), Gaps = 10/256 (3%)

Query: 97  LLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESAS 156
           L    +  A   V+    K +IA V H++Y D+  EI    S L     + +T  T    
Sbjct: 277 LTQVLDDNAEESVLAANAKLRIAGVAHVFYADMTAEIMKRFSYLGDHAQIFLTTSTPEKK 336

Query: 157 --IKSEILKIFPAARIHIME-NHGRDVLPFLILL-ETEQLSNYDYVCKIHGKKSKRKGYS 212
             I+ ++  +   A + I+E N GRDV  FL+   +  +   +D V KIH KKS +  Y+
Sbjct: 337 TQIEQQLQTMGRQAEVRIVESNRGRDVSAFLVTCADVLEPGRFDVVAKIHSKKSAQDAYN 396

Query: 213 WWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR 272
             E  L++R LF +LL +PG    ++  F T   +GM+   A      Y     +   N+
Sbjct: 397 AAE--LFKRHLFENLLPSPGYTANLLHLFATEPYLGMVFPPAVSLG--YPTLGHAWFANK 452

Query: 273 EMICTLAGRMGI--TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
           +    L  R+GI   F D       G+MF+ R EAL P+     +    P+  +  DG +
Sbjct: 453 KPALALCERLGIKLPFDDTTPLSPYGSMFFARPEALLPLTKAHFTFNDFPEEGQYSDGSL 512

Query: 331 EHAVERCFSLSVKKAN 346
            H +ER FS S     
Sbjct: 513 AHVIERIFSYSSLSEG 528


>gi|227875198|ref|ZP_03993340.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Mobiluncus mulieris
           ATCC 35243]
 gi|227844103|gb|EEJ54270.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Mobiluncus mulieris
           ATCC 35243]
          Length = 613

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 10/256 (3%)

Query: 97  LLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESAS 156
           L    +  A   V+    K +IA V H++Y D+  EI    S L     + +T  T    
Sbjct: 277 LTQVLDDNAEESVLAANAKLRIAGVAHVFYADMTAEIMKRFSYLGDHAQIFLTTSTPEKK 336

Query: 157 --IKSEILKIFPAARIHIME-NHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYS 212
             I+ ++  +   A + I+E N GRDV  FL+          +D V KIH KKS +  Y+
Sbjct: 337 TQIEQQLQTMGRQAEVRIVESNRGRDVSAFLVTCADVLEPGCFDVVAKIHSKKSAQDAYN 396

Query: 213 WWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNR 272
             E  L++R LF +LL +PG    ++  F T   +GM+   A      Y     +   N+
Sbjct: 397 AAE--LFKRHLFENLLPSPGYTANLLHLFATEPYLGMVFPPAVSLG--YPTLGHAWFANK 452

Query: 273 EMICTLAGRMGI--TFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
           +    L  R+GI   F D       G+MF+ R EAL P+     +    P+  +  DG +
Sbjct: 453 KPALALCERLGIKLPFDDTTPLSPYGSMFFARPEALLPLTKAHFTFNDFPEEGQYSDGSL 512

Query: 331 EHAVERCFSLSVKKAN 346
            H +ER FS S     
Sbjct: 513 AHVIERIFSYSSLSEG 528


>gi|254876593|ref|ZP_05249303.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842614|gb|EET21028.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 765

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 15/247 (6%)

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVT-LVTESASIKSEILKIFPAA 168
            +  I  K AI +HL+YIDL  E       L   +DL++T + + ++    E      AA
Sbjct: 523 SEKNISHKFAIHLHLFYIDLADEFNEYFKLLPKGYDLYITIIDSNNSEFIKEKFSSSGAA 582

Query: 169 RIHI--MENHGRDVLPFLILLETEQL-SNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFY 225
            + I  ++N GRD+ P +  L+ + L   Y+ V   H KK+     +   GD WR +L  
Sbjct: 583 NVEIVAVDNIGRDIAPMIFGLKDQLLNRGYEIVGHFHSKKTVSAHDNL--GDKWRAYLLN 640

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT 285
           +L+G    +   I        IG++      Y          +G+N+  +  L   +G+ 
Sbjct: 641 NLIGDNEQISNSILNLFNDEKIGLVFPEDRTY--------IDIGENKFYVDELCTAIGLE 692

Query: 286 FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345
              +   F  G MFW R +A+  I +L        +     DG   HA+ER     V+K 
Sbjct: 693 KICETPLFPLGNMFWARVDAIRDIFSLN-EDMILQEEPLPRDGSYMHALERIIPNIVEKN 751

Query: 346 NFRISDV 352
            ++   V
Sbjct: 752 GYKYVTV 758


>gi|241668058|ref|ZP_04755636.1| glycosyl transferase, group 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 756

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 15/247 (6%)

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVT-LVTESASIKSEILKIFPAA 168
            +  I  K AI +HL+YIDL  E       L   +DL++T + + ++    E      AA
Sbjct: 514 SEKNISHKFAIHLHLFYIDLADEFNEYFKLLPKGYDLYITIIDSNNSEFIKEKFSSSGAA 573

Query: 169 RIHI--MENHGRDVLPFLILLETEQL-SNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFY 225
            + I  ++N GRD+ P +  L+ + L   Y+ V   H KK+     +   GD WR +L  
Sbjct: 574 NVEIVAVDNIGRDIAPMIFGLKDQLLNRGYEIVGHFHSKKTVSAHDNL--GDKWRAYLLN 631

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT 285
           +L+G    +   I        IG++      Y          +G+N+  +  L   +G+ 
Sbjct: 632 NLIGDNEQISNSILNLFNDEKIGLVFPEDRTY--------IDIGENKFYVDELCTAIGLE 683

Query: 286 FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345
              +   F  G MFW R +A+  I +L        +     DG   HA+ER     V+K 
Sbjct: 684 KICETPLFPLGNMFWARVDAIRDIFSLN-EDMILQEEPLPRDGSYMHALERIIPNIVEKN 742

Query: 346 NFRISDV 352
            ++   V
Sbjct: 743 GYKYVTV 749


>gi|258654317|ref|YP_003203473.1| Rhamnan synthesis F [Nakamurella multipartita DSM 44233]
 gi|258557542|gb|ACV80484.1| Rhamnan synthesis F [Nakamurella multipartita DSM 44233]
          Length = 631

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 12/246 (4%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILK-IFPAARIH 171
             +I ++ H++Y D+  E+   + N+ + FDL VT  +  +  +I+S +      +  + 
Sbjct: 295 PLRICVLAHIFYEDMTDEMMGWIGNIPVPFDLVVTTTSAAKKEAIESALEAYALKSVEVR 354

Query: 172 IME-NHGRDVLPFLILLETEQLSN-YDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLG 229
           ++E N GR    FLI       S  YD V KIH KKS + G +   G L++     +LL 
Sbjct: 355 LVESNRGRAESAFLIACRDVLTSGEYDLVLKIHSKKSPQNGANL--GQLFKHHSVDNLLS 412

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT--FQ 287
           +PG V  I+  F +   +GM+          +     S   NRE    LA ++GI   F 
Sbjct: 413 SPGYVASILGMFQSQPSLGMVFPPVVNIG--FPTLGHSWFTNREAAHELADQLGIHTIFD 470

Query: 288 DQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKV-HKALDGEIEHAVERCFSLSVKKAN 346
                   GTMFW R E+L  +                  DG + H +ER +  +V  A 
Sbjct: 471 RTTPLAPNGTMFWARPESLAKLARHDFDYSQFAAEHEGWSDGMLGHVIERLYGYAVLDAG 530

Query: 347 FRISDV 352
            RI  V
Sbjct: 531 LRIQCV 536


>gi|167627488|ref|YP_001677988.1| group 1 glycosyl transferase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597489|gb|ABZ87487.1| glycosyl transferase, group 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 763

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 15/247 (6%)

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVT-LVTESASIKSEILKIFPAA 168
            +  I  K AI +HL+YIDL  E       L   +DL++T + + ++    E      AA
Sbjct: 521 SEKNISHKFAIHLHLFYIDLADEFNEYFKLLPKGYDLYITIIDSNNSEFIKEKFSSSGAA 580

Query: 169 RIHI--MENHGRDVLPFLILLETEQL-SNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFY 225
            + I  ++N GRD+ P +  L+ + L   Y+ V   H KK+     +   GD WR +L  
Sbjct: 581 NVEIVAVDNIGRDIAPMIFGLKDQLLNRGYEIVGHFHSKKTVSAHDNL--GDKWRAYLLN 638

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT 285
           +L+G    +   I        IG++      Y          +G+N+  +  L   +G+ 
Sbjct: 639 NLIGDNEQISNSILNLFNDEKIGLVFPEDRTY--------IDIGENKFYVDELCTAIGLE 690

Query: 286 FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345
              +   F  G MFW R +A+  I +L        +     DG   HA+ER     V+K 
Sbjct: 691 KICETPLFPLGNMFWARVDAIRDIFSLN-EDMILQEEPLPRDGSYMHALERIIPNIVEKN 749

Query: 346 NFRISDV 352
            ++   V
Sbjct: 750 GYKYVTV 756


>gi|16124886|ref|NP_419450.1| hypothetical protein CC_0633 [Caulobacter crescentus CB15]
 gi|221233606|ref|YP_002516042.1| hypothetical protein CCNA_00669 [Caulobacter crescentus NA1000]
 gi|13421844|gb|AAK22618.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|51039815|tpg|DAA00361.1| TPA_exp: conserved hypothetical protein [Caulobacter vibrioides]
 gi|220962778|gb|ACL94134.1| hypothetical protein CCNA_00669 [Caulobacter crescentus NA1000]
          Length = 818

 Score =  222 bits (565), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 77/319 (24%), Positives = 127/319 (39%), Gaps = 15/319 (4%)

Query: 36  GGFFFWFWTLFYKRSKKLCYDENY--VVAYGSRS-GKKFFAQSNLYMMERELHFDGQRIH 92
             +F W       +  +  + +    V        G+  + + + +     LH     + 
Sbjct: 508 ESYFGWLSGA--LKHAEARHPKGEALVFVNAWNEWGEGAYLEPDRWFGHGYLHATRTALS 565

Query: 93  HFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV- 151
            +   L            Q A +A    ++HL+Y +L    A  L+  +   DL +T+  
Sbjct: 566 AWLPRLTNAHPIIAEAQSQFAKRADAVTLLHLFYPELIDWFAERLAATADVLDLMITVPE 625

Query: 152 TESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGY 211
           T S +  +     FP A + I EN GRD+ PF+  L   +   Y   CK+H K+S  +  
Sbjct: 626 TWSEADLARARAAFPTAHLAIAENRGRDIRPFVETLRRARALGYSVFCKLHSKRSPHQA- 684

Query: 212 SWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKN 271
              +GD WR  L   LLG       +         +G++ +   R      D    +  N
Sbjct: 685 ---KGDQWRTTLVEGLLGGEAAALALRAF-AQDPKLGLLAAAGARMRIGDPDV---MDNN 737

Query: 272 REMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIE 331
           R     L+  MG+  + +   F AG+MFW RTEA  P+ +L             +DG   
Sbjct: 738 RAEADRLSAHMGLKPRPETP-FAAGSMFWGRTEAFAPLTDLSDDEIAFGPELGRVDGTTA 796

Query: 332 HAVERCFSLSVKKANFRIS 350
           HA+ER  +  V++A +R S
Sbjct: 797 HAIERLTAAIVERAGYRAS 815


>gi|295687882|ref|YP_003591575.1| rhamnan synthesis protein F [Caulobacter segnis ATCC 21756]
 gi|295429785|gb|ADG08957.1| Rhamnan synthesis F [Caulobacter segnis ATCC 21756]
          Length = 818

 Score =  222 bits (565), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 10/284 (3%)

Query: 68  GKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYI 127
           G+  + + + +     LH     +  +   L                +A    ++HL+Y 
Sbjct: 541 GEGAYLEPDRWFGHGYLHATRAALSAYQPRLTDAHPLVAQAQAAFVKRADAVTLLHLFYP 600

Query: 128 DLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186
           +L    A  L+  +   DL +T+  T S +  +     FP A + I EN GRD+ PF+  
Sbjct: 601 ELIDWFAERLAATADVLDLMITVPETWSEADLARARATFPMAHLAIAENRGRDIRPFVET 660

Query: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246
           L   +   Y   CK+H K+S  +     +GD WR  L   LLG       +         
Sbjct: 661 LRRARTLGYSVFCKLHSKRSPHRA----KGDEWRAELVDGLLGGEAAALALRAF-AQDAK 715

Query: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306
           +G++ +   R      D    +  NR+    LA RMG+    +   F AG+MFW RTEA 
Sbjct: 716 LGLLAAAGSRLRIGDPDV---MNNNRQDADRLARRMGLKLAPETP-FSAGSMFWGRTEAF 771

Query: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRIS 350
            P+ +L  +          +DG   HA+ER  +  V +A +R S
Sbjct: 772 APLSDLTDAEIDFGPELGRVDGTTAHAIERLTAAIVARAGYRAS 815


>gi|304309760|ref|YP_003809358.1| hypothetical protein HDN1F_01080 [gamma proteobacterium HdN1]
 gi|301795493|emb|CBL43691.1| hypothetical protein HDN1F_01080 [gamma proteobacterium HdN1]
          Length = 1315

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 108/262 (41%), Gaps = 15/262 (5%)

Query: 92  HHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           H +P+ L          + +    A IAI +HLYY DL       LS +   FDL++++ 
Sbjct: 422 HPYPEQLKQL---HELTLPKHTSNATIAIHIHLYYADLAPTFVQALSRMERPFDLYISIQ 478

Query: 152 --TESASIKSEILKI--FPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSK 207
                  I++ + KI       I    N GRD+ PF+ +   E L  YD +  +H KKS 
Sbjct: 479 VRANPVEIEAVVRKIPCLRGLDIRATPNLGRDLYPFVCIF-GEALRKYDIIAHLHSKKSL 537

Query: 208 RKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCS 267
              Y+      W  ++   L  +P  + +I+         G++  + +     Y  YT  
Sbjct: 538 ---YNQGATAGWLEYILDSLFRSPEDIARILERLSDASQTGIVYPQNFS-GLPYMAYT-- 591

Query: 268 LGKNREMICTLAGRMGIT-FQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKAL 326
              NR     +  R G+T       D+ AG+MFW R +A+ P    +L+           
Sbjct: 592 WLANRSRAQQVQARFGLTSLPSGYFDYPAGSMFWARADAIAPFFEAQLNEDDFENESGQT 651

Query: 327 DGEIEHAVERCFSLSVKKANFR 348
           DG + H +ER   L  +   FR
Sbjct: 652 DGTLAHTLERFLVLVPESLGFR 673


>gi|310286583|ref|YP_003937841.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           S17]
 gi|309250519|gb|ADO52267.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           S17]
          Length = 662

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 97/267 (36%), Gaps = 15/267 (5%)

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE 160
           +  P + +  +     + A + H+Y++DL  +    +S L    DL++T   +      +
Sbjct: 289 YVLPTVTRNPRTGADVRSAFIYHIYFLDLLGDTCRYISALPEETDLYITTTEDKIDAIRD 348

Query: 161 ILK----IFPAARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYS 212
            +       P   I ++ N GRDV   L+      LS  YD +   H KKS   +  G+ 
Sbjct: 349 YMASHGVNHPVTFISVV-NRGRDVSALLVAACDVVLSGKYDVIGFAHDKKSSQNQENGHH 407

Query: 213 WWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY-CDYTCSLGKN 271
             E   +   L  + L +   V  I+  F     +G +      +   +        G N
Sbjct: 408 GTESQGFAYKLMENTLASRDYVENILTLFSNEPRLGQVAPPPPFHALYFAHTLPHDWGAN 467

Query: 272 REMICTLAG-RMGITFQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFE-PKVHKAL 326
            E+   L   R  I          A   G+ +W R EAL P+           P+     
Sbjct: 468 FEITKELLEDRFDIHVPLSPGKPSASAIGSCYWFRVEALKPLFEYGWKYEDFLPEGEMGE 527

Query: 327 DGEIEHAVERCFSLSVKKANFRISDVD 353
           DG + HA+ER      +   +  + V 
Sbjct: 528 DGTVSHAIERANGYICQSQGYYPAWVM 554


>gi|224284010|ref|ZP_03647332.1| Lipopolysaccharide biosynthesis protein [Bifidobacterium bifidum
           NCIMB 41171]
 gi|313141164|ref|ZP_07803357.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313133674|gb|EFR51291.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 662

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 97/267 (36%), Gaps = 15/267 (5%)

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSE 160
           +  P + +  +     + A + H+Y++DL  +    +S L    DL++T   +      +
Sbjct: 289 YVLPTVTRNPRTGADVRSAFIYHIYFLDLLGDTCRYISALPEETDLYITTTEDKIDAIRD 348

Query: 161 ILK----IFPAARIHIMENHGRDVLPFLILLETEQLSN-YDYVCKIHGKKS---KRKGYS 212
            +       P   I ++ N GRDV   L+      LS  YD +   H KKS   +  G+ 
Sbjct: 349 YMASHGVNHPVTFISVV-NRGRDVSALLVAACDVVLSGKYDVIGFAHDKKSSQNQENGHH 407

Query: 213 WWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY-CDYTCSLGKN 271
             E   +   L  + L +   V  I+  F     +G +      +   +        G N
Sbjct: 408 GTESQGFAYKLMENTLASRDYVENILTLFSNEPRLGQVAPPPPFHALYFAHTLPHDWGAN 467

Query: 272 REMICTLAG-RMGITFQDQKLDFFA---GTMFWVRTEALDPIKNLRLSRYFE-PKVHKAL 326
            E+   L   R  I          A   G+ +W R EAL P+           P+     
Sbjct: 468 FEITKELLEDRFDIHVPLSPGKPSASAIGSCYWFRVEALKPLFEYGWKYEDFLPEGEMGE 527

Query: 327 DGEIEHAVERCFSLSVKKANFRISDVD 353
           DG + HA+ER      +   +  + V 
Sbjct: 528 DGTVSHAIERANGYICQSQGYYPAWVM 554


>gi|71735705|ref|YP_273244.1| hypothetical protein PSPPH_0972 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556258|gb|AAZ35469.1| conserved hypothetical protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 1262

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 106/256 (41%), Gaps = 17/256 (6%)

Query: 101 WESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA----- 155
            E+ +     +     +I + +HLYY DL   I+  L+N+ ++FDL ++   E       
Sbjct: 195 LENSSHINFNESIEDMRIGVYLHLYYTDLLGAISKHLNNIPLAFDLFISTPHELDHKKLR 254

Query: 156 SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWE 215
            I S+ +       I  + N GRD+ PF+I    E L  YD +C IH KKS+        
Sbjct: 255 KIVSDSVTNVKEISIKHVPNRGRDIAPFIIEFGNE-LQAYDAICHIHTKKSEHTKGL--- 310

Query: 216 GDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMI 275
              W   +   LLG+   V KI+          +I      Y   Y        +N E+ 
Sbjct: 311 -SDWGDDILSSLLGSREDVKKILTLLKGDAK--IIYPEGQNY---YMKDPTGWSENHEIA 364

Query: 276 CT-LAGRMGITFQD-QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
              L+  +     +  K +F  G+MFW R E +    N+ L     P+     DG + HA
Sbjct: 365 KHILSDHLETDISNFPKAEFPEGSMFWARQEGIQSFLNIPLDWEDFPEEPIPTDGTLAHA 424

Query: 334 VERCFSLSVKKANFRI 349
           +ER   +S   A  RI
Sbjct: 425 LERIILISAYAAPGRI 440


>gi|125623094|ref|YP_001031577.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase RgpF [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|124491902|emb|CAL96823.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase RgpF [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300069842|gb|ADJ59242.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase RgpF [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 588

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 26/286 (9%)

Query: 94  FPQLLHGWESPAMGKVMQIAIKA--KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV 151
           +P   +  E   +    +I  K+  KIAI +H +Y+DL  E  +       ++DL +T  
Sbjct: 274 YPDREYMLEEKTLKLSTEINKKSNLKIAIHLHAFYLDLIPEYLDYFDKYVQNYDLFITTD 333

Query: 152 TESASIKSEILKIFPAARIH---IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKR 208
           T       +I+K +P  +I    +  N GRDVLP++ +  +E +++YD     H KKSK 
Sbjct: 334 T--KDKYEQIIKSYPLNQIKKVLVTGNKGRDVLPWMEI--SELMADYDLCGHFHTKKSKD 389

Query: 209 KGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSL 268
               W  G+ WRR + Y LL        I + F+ +  +G++ +    +   +   T   
Sbjct: 390 ND--WIVGESWRRDIEYSLLKPAQ---AIFQEFEKNPKLGLMIADVPSFFEHFYGPTYIT 444

Query: 269 GKNR-EMICTLAGRM------GITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPK 321
            ++    +  +  ++      G+  +D  +    GTM W R +AL+ +  + +     P+
Sbjct: 445 ERDIWPDMEEIWKKINFENPRGLKQKDSYVMS-YGTMIWYRPQALNNLLKVDIEAA-VPE 502

Query: 322 VHKALDGEIEHAVERCFSL--SVKKANFRISDVDCILGYRKSLSQN 365
                   I HA ER           +FRIS +    G+  + S N
Sbjct: 503 EPLPY-NSILHAFERLLVYTSWANGYDFRISQIQTNNGFVANFSAN 547


>gi|145588508|ref|YP_001155105.1| methyltransferase type 11 [Polynucleobacter necessarius subsp.
            asymbioticus QLW-P1DMWA-1]
 gi|145046914|gb|ABP33541.1| Methyltransferase type 11 [Polynucleobacter necessarius subsp.
            asymbioticus QLW-P1DMWA-1]
          Length = 1082

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 131/255 (51%), Gaps = 15/255 (5%)

Query: 96   QLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNL--SISFDLHVTLVTE 153
             +L  + +P   ++++ + +  IAIVVH++Y+D W +I  ++  +      D+++T+   
Sbjct: 837  DILKNYINPEHAEIIRESQENSIAIVVHIHYMDTWEDIKKIIKKILSVHDSDIYITITN- 895

Query: 154  SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSW 213
                   I   FP+A I ++EN GRD+LPF+ +L+     NY  +CKIH KKS+ +    
Sbjct: 896  -LEQYQSIKNDFPSANIELVENRGRDILPFINVLKKIIHKNYVAICKIHSKKSEYRS--- 951

Query: 214  WEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNRE 273
             +G++ R+ L++ L+     + KI + F+ ++ +GM+    Y   +   +       NRE
Sbjct: 952  -DGEVIRKELYFSLINNEITLEKIPKFFEVNKKLGMLVPGKYFLQHNDINMYF----NRE 1006

Query: 274  MICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
             I  +   +G+ F++ K  F AG+MFW R  AL  +  L  S           DG + HA
Sbjct: 1007 NISKVCSVIGVNFKESK--FPAGSMFWARPAALQKLLKLE-SGELFDVEEGLADGTVAHA 1063

Query: 334  VERCFSLSVKKANFR 348
            VER F L  + + F 
Sbjct: 1064 VERLFGLVSESSGFY 1078


>gi|116071634|ref|ZP_01468902.1| hypothetical protein BL107_05779 [Synechococcus sp. BL107]
 gi|116065257|gb|EAU71015.1| hypothetical protein BL107_05779 [Synechococcus sp. BL107]
          Length = 934

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 21/250 (8%)

Query: 110 MQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT-ESASIKSEILKI---- 164
             I  + ++AI +H+YY +   E    L+ L     L +T  T E   +  EIL+     
Sbjct: 38  TSIFQECQVAIYLHIYYPESLHEFLEYLTVLPSQIRLVITTTTSEKKELIIEILERALLI 97

Query: 165 --FPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRW 222
                  ++  EN GRD+  F+ +   ++L  YD VCK+H KKS   G     G  W R+
Sbjct: 98  NRLDLCHVY-HENKGRDIGAFINIY--DELIKYDVVCKLHAKKSPHLGEF---GKSWFRY 151

Query: 223 LFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRM 282
           L    +G    +  I+      +DIG++   +++  N +         N ++  +++  +
Sbjct: 152 LIRSTIGNQSAIENIVNILYHSKDIGILAPTSFQGTNNH-----DWASNFDISQSISDHI 206

Query: 283 ---GITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
               +    +KL + + T+FW + EAL+  +   +   F P+    +DG   H++ER   
Sbjct: 207 FNSELDINKEKLRYPSATVFWFKPEALNQQQFRSIQPDFFPEEPIPIDGTTAHSLERLIP 266

Query: 340 LSVKKANFRI 349
                   + 
Sbjct: 267 YISILNGLKT 276


>gi|192359986|ref|YP_001983898.1| Capsule polysaccharide biosynthesis protein family [Cellvibrio
           japonicus Ueda107]
 gi|190686151|gb|ACE83829.1| Capsule polysaccharide biosynthesis protein family [Cellvibrio
           japonicus Ueda107]
          Length = 872

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 74/246 (30%), Positives = 102/246 (41%), Gaps = 14/246 (5%)

Query: 112 IAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE-SASIKSEILKIFPAARI 170
              + +IA+V HLYY DL  EI + L  +  +FDL VTL    +  I+  + + +P A  
Sbjct: 597 EHSQKRIAVVAHLYYRDLVPEILSALETIPEAFDLIVTLPDWGTRHIEQMVREAYPEAVF 656

Query: 171 HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWE--GDLWRRWLFYDLL 228
           +   N GRD+ PF+ LL      NYD + KI  K+   +        G LWR   F  LL
Sbjct: 657 YRAVNRGRDIGPFVDLLPLITEKNYDALLKIQTKRGYYRSGRLLPQFGQLWRSETFRALL 716

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD 288
           G    V  I+    T   + M+G   Y        Y       + ++             
Sbjct: 717 GNKSRVTDILEALRTDPSLNMVGPSPYFLSLTKYPYHDQGDLAQTILN----------NP 766

Query: 289 QKLDFFAGTMFWVRTEALDPIKN-LRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
               FFAGTMFWVR   L P+     LS         A DG   H +ER FS      + 
Sbjct: 767 TGNGFFAGTMFWVRPSCLRPLTEPEHLSITAFEPESGANDGATAHLIERLFSQVAFANDG 826

Query: 348 RISDVD 353
           +I+ V 
Sbjct: 827 KIAGVP 832


>gi|332561589|ref|ZP_08415902.1| glycosyltransferase [Rhodobacter sphaeroides WS8N]
 gi|332274091|gb|EGJ19409.1| glycosyltransferase [Rhodobacter sphaeroides WS8N]
          Length = 821

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 59/275 (21%), Positives = 107/275 (38%), Gaps = 15/275 (5%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANL 136
              M R+L    +R+      +H     A     +     + ++ VH +Y D   +    
Sbjct: 547 RRRMWRDLAEVEERLADADNWVHRKLRIAPYGTAEATELPRFSLHVHAFYTDDLAQDVRR 606

Query: 137 LSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSN 194
            +    +  + VT  ++  +  I++ +  +  A  + +  N GRD+LPFL L      + 
Sbjct: 607 HAAYRCASRIVVTTDSDRKADEIRTLMAAVGLAPEVLVRPNRGRDILPFLQLFLPGGAAG 666

Query: 195 YDYV-CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSR 253
            D + C +H KKS     S   GD+WR +L   LLG    +         +  +G++   
Sbjct: 667 EDEIWCHLHQKKSLATTDS---GDMWRAFLLRILLGDEASLSDAATHL-RNPGVGLVAP- 721

Query: 254 AYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLR 313
                  +  Y      +R ++  +A R+     D  L F  G MF+VR+  +  + +L 
Sbjct: 722 -------FDPYFIPWDASRALLPRVAPRLPGPLPDNPLLFPVGNMFFVRSAVVRAMNDLF 774

Query: 314 LSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
            + Y  P      DG   H +ER +     +    
Sbjct: 775 GAGYPWPNEPIPNDGTEFHLIERLWPALAAQCGLT 809


>gi|23009067|ref|ZP_00050256.1| COG3754: Lipopolysaccharide biosynthesis protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 486

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 30/280 (10%)

Query: 74  QSNLYMMERELHFDGQRIHHFPQLLHGWE--SPAMGKVMQIA-----------IKAKIAI 120
           Q+N  +       D       P++ +  E   PA  KV+ +              A+I +
Sbjct: 218 QANPLVHYLRKGVDLNLSPRGPKVANVAEKKLPASRKVVNLVAAGSSAPAGALANARIGV 277

Query: 121 VVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAA-----RIHIMEN 175
             H+++ DL   +    +N+     ++VT  +  AS    I K F         I I  N
Sbjct: 278 FAHIFHTDLCEYVLKYTNNIPFDTTVYVTTSS--ASKADFIRKTFGRLSKHRYEIVIAPN 335

Query: 176 HGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVF 235
            GRD+ P L+        N DY   +H KKS      +   D WR +LF   LG+  ++ 
Sbjct: 336 RGRDIAPMLVGYRN-AFQNCDYAVHVHTKKSLHYSSGF---DAWRDYLFEMNLGSAELIT 391

Query: 236 KIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK-LDFF 294
            I+       +IG +    Y    K        G N + I  L    G++   +  LDF 
Sbjct: 392 GIVNVLSRS-NIGAVAPDHYAPIAKL----IQWGGNIDAINGLLSFTGLSVASENVLDFP 446

Query: 295 AGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAV 334
           +G+MFW + +AL  +  + L  Y        +DG + HA+
Sbjct: 447 SGSMFWFKPDALSKLMEIHLQSYHFDPELGQVDGTLAHAI 486


>gi|221218294|ref|YP_002524321.1| glycosyltransferase [Rhodobacter sphaeroides KD131]
 gi|221163321|gb|ACM04287.1| glycosyltransferase [Rhodobacter sphaeroides KD131]
          Length = 821

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 59/275 (21%), Positives = 107/275 (38%), Gaps = 15/275 (5%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANL 136
              M R+L    +R+      +H     A     +     + ++ VH +Y D   +    
Sbjct: 547 RRRMWRDLAEVEERLADADNWVHRKLRIAPYGTAEATELPRFSLHVHAFYTDDLAQDVRR 606

Query: 137 LSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSN 194
            +    +  + VT  ++  +  I++ +  +  A  + +  N GRD+LPFL L      + 
Sbjct: 607 HAAYRCASRIVVTTDSDRKADEIRTLMAAVGLAPEVLVRPNRGRDILPFLQLFLPGGAAG 666

Query: 195 YDYV-CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSR 253
            D + C +H KKS     S   GD+WR +L   LLG    +         +  +G++   
Sbjct: 667 EDEIWCHLHQKKSLATTDS---GDIWRAFLLRILLGDEASLSDAATHL-RNPGVGLVAP- 721

Query: 254 AYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLR 313
                  +  Y      +R ++  +A R+     D  L F  G MF+VR+  +  + +L 
Sbjct: 722 -------FDPYFIPWDASRALLPRVAPRLPGPLPDNPLLFPVGNMFFVRSRVVRAMNDLF 774

Query: 314 LSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFR 348
            + Y  P      DG   H +ER +     +    
Sbjct: 775 GAGYPWPNEPIPNDGTEFHLIERLWPAMAAQCGLT 809


>gi|222148479|ref|YP_002549436.1| hypothetical protein Avi_2007 [Agrobacterium vitis S4]
 gi|221735467|gb|ACM36430.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 513

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 76/316 (24%), Positives = 125/316 (39%), Gaps = 23/316 (7%)

Query: 50  SKKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKV 109
             +          Y  R         N +    E    GQ+     +   G +  +    
Sbjct: 180 FSEDRQPRADFDGYYYRKANGLSRGQNPFQHCIESMDGGQKFPANVESRPGVQLFSKPPF 239

Query: 110 MQ---------IAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTES-ASIKS 159
            +         +A++  + I VH +Y++L+ EIA+ L  L++ F L VT+  ES A +  
Sbjct: 240 AEDITIDSSNTVALQLSLCIHVHCFYVELFNEIADRLQCLTLPFYLVVTVCNESDAKVVE 299

Query: 160 EILKIFPAAR---IHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEG 216
            +L  F   +   I ++EN GRD+ PFLI          D V  +H KKS         G
Sbjct: 300 NLLVDFNQRQNTHILVVENRGRDIAPFLIDASPI-WRKSDLVLHLHTKKSPH----ITWG 354

Query: 217 DLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMIC 276
           D WRR+LF   +G   ++  II  F    D+GM+    +     + +      KN++ I 
Sbjct: 355 DNWRRYLFDQTIGYEPLLKGIIDQFQDRDDMGMMYPENFCMIKHFTE----EEKNKDAIR 410

Query: 277 TLAGRMGITFQDQKLD-FFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVE 335
            +A ++ +    + L  + AG+M + R +AL  +                LDG   H +E
Sbjct: 411 YIAQKLRLECSFEALGAYAAGSMAFYRVKALASVLEYDALENLFGPEQGQLDGTAAHVLE 470

Query: 336 RCFSLSVKKANFRISD 351
           R     V+   F    
Sbjct: 471 RLLPEMVRLNGFETQP 486


>gi|160936497|ref|ZP_02083865.1| hypothetical protein CLOBOL_01388 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440582|gb|EDP18320.1| hypothetical protein CLOBOL_01388 [Clostridium bolteae ATCC
           BAA-613]
          Length = 373

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 102/236 (43%), Gaps = 7/236 (2%)

Query: 125 YYIDLWIEIANLLSNLSISFDL-HVTLVTESASIKSEILKIFPAA--RIHIMENHGRDVL 181
           +Y DL  +    +  +    D+  VT   + A    + +        ++ + EN GRD+ 
Sbjct: 2   FYEDLLNQCYLYIEQIPKYIDVCFVTSNPKIAFKVKKYINNTKKINYKVLVKENRGRDMA 61

Query: 182 PFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTF 241
             L+    + +  Y+Y+C +H KKS + G +  +G  +   ++ +L+G+ G++  I+R  
Sbjct: 62  ALLVTCH-DFIMEYEYLCFVHDKKSLQMG-NDNDGCKFMELIWKNLIGSTGLIENILRYL 119

Query: 242 DTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQD--QKLDFFAGTMF 299
             +RD+G++      + N    +      N + +  L  ++ +      +K     G  F
Sbjct: 120 GNNRDVGLMVPPIPYWGNYIGVFINPWTCNYDNVINLGNQLKLKKNVCYEKEYVTIGGAF 179

Query: 300 WVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCI 355
           W RT AL P+   +       +   A+DG I HA+ER          + + ++  +
Sbjct: 180 WCRTNALKPLFEYKWKLEDFCQEPMAVDGTISHAIERILGFVALNNGYDVLEIINL 235


>gi|146279467|ref|YP_001169625.1| hypothetical protein Rsph17025_3443 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557708|gb|ABP72320.1| hypothetical protein Rsph17025_3443 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 823

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 59/274 (21%), Positives = 100/274 (36%), Gaps = 16/274 (5%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIAN 135
              + R+L    + +      +H     A    +  +      A+ VH +Y D       
Sbjct: 548 RRRVWRDLAEVEETLSASDNWVHRALRLAPYATVADSSDLPPFALHVHAFYTDDLAADVR 607

Query: 136 LLSNLSISFDLHVTLVTESA--SIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLS 193
                 ++  + +T   E     I++ +        + ++ N GRD+LPF+ L      +
Sbjct: 608 SHRAFRLARRIVITTDNERKASEIRTRMGAEGLYPEVILVPNRGRDILPFMQLFLPGGPA 667

Query: 194 NYDYV-CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGS 252
             D + C +H KKS     S   GD+WR +L   LLG    +   +        +G++  
Sbjct: 668 GKDEIWCHLHQKKSLATSDS---GDVWRAFLLRILLGDDAGLSDAVGHL-RDPAVGLVAP 723

Query: 253 RAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNL 312
                   +  Y      +R ++   A R+     D  L F  G MFWVR   +  + +L
Sbjct: 724 --------FDPYHVPWDASRALLPRFAPRLPGPLPDNPLLFPVGNMFWVRAGVVRAMNDL 775

Query: 313 RLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
               Y  P    A DG   H VER +     +  
Sbjct: 776 FGPSYPWPNEPIANDGTEFHLVERLWPTMAARCG 809


>gi|78184217|ref|YP_376652.1| lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9902]
 gi|78168511|gb|ABB25608.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
           CC9902]
          Length = 519

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 21/279 (7%)

Query: 95  PQLLHGWESPAMGKVM-QIAIKAKIAIVVHLYYIDLWIEIANLLSNL-----SISFDLHV 148
           P+ L+  + P+  +     +    +A+++H +Y D+  +I   L +          DL+V
Sbjct: 244 PERLNVTQIPSTDERSWGESSPGHLALMIHGFYPDVLDDILLKLPSFCAGMVGTQLDLYV 303

Query: 149 TLVTESASIKSEILKI--FPAARIHIMENHGRDVLPFL-ILLETEQLSNYDYVCKIHGKK 205
           +   +      + L+   F   R+  +EN GRDV PFL  LL     + + +  K+H KK
Sbjct: 304 STSMDQIDQVEKKLRDLDFACVRLFGVENRGRDVAPFLLHLLPAVAAAGHHFFVKLHTKK 363

Query: 206 SKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYT 265
           S + G      D W R L   LL +   +  I   F    D+G +       P     + 
Sbjct: 364 SLQFGIDGL--DKWSRHLIESLL-SAAGLEAIRYQFLDDEDLGCLCPSGTLLPLAIALF- 419

Query: 266 CSLGKNREMICTLAGRMGITFQDQKLD-FFAGTMFWVRTEALDPIKNLRLSRYFEPKVHK 324
               KN+  +  L     I  +   +  F AG+MF  R EA   + +   S         
Sbjct: 420 ----KNKTHLHHLLSHSEINGRWALMQTFVAGSMFAGRVEAFRSLLDQGFSLDDFELEGG 475

Query: 325 ALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRKSLS 363
             DG   HA+ER  SL VK++ ++I ++    G  +++ 
Sbjct: 476 QFDGTFAHALERLISLEVKRSGWQIKEMS---GSPEAVP 511


>gi|209524107|ref|ZP_03272658.1| glycosyl transferase family 2 [Arthrospira maxima CS-328]
 gi|209495482|gb|EDZ95786.1| glycosyl transferase family 2 [Arthrospira maxima CS-328]
          Length = 2819

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 20/259 (7%)

Query: 108  KVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESAS-IKSEILKIFP 166
            K+   +   KIA+V+H YY +L  E+ + L NLS  +DL VT+       + S + K   
Sbjct: 1729 KLYASSENPKIAVVLHAYYPELLPELFSKLDNLS-DYDLFVTIPENVVDSVTSALDKYTK 1787

Query: 167  AARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYD 226
              ++ I++N G D+LPFL ++       Y YVCKIH K+          G LWR  L   
Sbjct: 1788 NYQVSIVKNIGYDILPFLEVISELDTLGYKYVCKIHTKR-----DHPDFGSLWRECLLDA 1842

Query: 227  LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF 286
            +LG   +  +II  FD +  + ++G     Y +          K ++MI      + +  
Sbjct: 1843 VLGDKNITEQIITAFDNNPSLQIVGPA-LLYMSMLGTIYDGHEKMKKMIHDFMEPLNL-- 1899

Query: 287  QDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHK--ALDGEIEHAVERCFSLS--- 341
              +   FF G+MFW R   L  I +  L +  + +  K     G   H VER   L    
Sbjct: 1900 -IEDWGFFGGSMFWSRITPLKYIADQILLKPIDWQASKSWLTTGFYYHIVERLLGLVSYI 1958

Query: 342  ----VKKANFRISDVDCIL 356
                V   +++I D + I+
Sbjct: 1959 NEGQVGLVDYKIIDTENIV 1977


>gi|148556902|ref|YP_001264484.1| glycosyl transferase family protein [Sphingomonas wittichii RW1]
 gi|148502092|gb|ABQ70346.1| glycosyl transferase, family 2 [Sphingomonas wittichii RW1]
          Length = 1301

 Score =  188 bits (479), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 16/240 (6%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP-AARIHIMEN 175
           K A+V+HL+Y ++ +E+ + ++ +  S D+ VT            L   P  A +  + N
Sbjct: 2   KAALVLHLFYPEVAVELIDRVAAIGASVDIFVTHSVALDETVLAALDRLPRKAEVVTVAN 61

Query: 176 HGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVF 235
            G D+ P   LL       YD + K+H KK             WRR  +  ++G+P +V 
Sbjct: 62  RGWDIGPLFELLPLLAERGYDLIGKLHSKK-----GGSGYAPEWRRLAYDGMIGSPALVA 116

Query: 236 KIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT-FQDQKLDFF 294
            I+  FD H D+ ++G++       Y      L +N E++  LA R+    +      FF
Sbjct: 117 DIVAAFDAHPDLSLLGAKPL-----YKSVASHLFRNAELLSDLAPRLTAPAYPPADWGFF 171

Query: 295 AGTMFWVRTEALDPIKNLRLSRYFEPKVHKA-LDGEIEHAVERCFSLSVKKANFRISDVD 353
           AGT FW R   L+ +  L     F         DG + HAVER F L+      +I  V+
Sbjct: 172 AGTFFWARRTLLEKVAAL---ADFRDAAPNQDRDGALGHAVERLFGLAPIGLGGKIGLVE 228


>gi|88808074|ref|ZP_01123585.1| Glycosyl transferase, group 1 [Synechococcus sp. WH 7805]
 gi|88788113|gb|EAR19269.1| Glycosyl transferase, group 1 [Synechococcus sp. WH 7805]
          Length = 512

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 13/238 (5%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKI---FPAAR 169
             KI +V+H YY +    I   L ++   FDL VT+ +  +   +K  + K+        
Sbjct: 48  PLKILVVIHAYYPESLATIFPSLRHMPCHFDLVVTVCSCGDKEVVKEYLEKVDLPIDVLD 107

Query: 170 IHIMENHGRDVLPFLILLETEQLSN--YDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDL 227
           I ++ N GRD+LPF+ +++  +L N  YD+V K+H K+S         G  W      +L
Sbjct: 108 IKVLTNLGRDLLPFVQVIKGLKLQNKAYDFVLKLHTKRSVASSKGKEFGGKWLEGSLSNL 167

Query: 228 LGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQ 287
           LG+P  V  I+       +  ++         ++    C    N   I  L  R G+   
Sbjct: 168 LGSPENVKYILLELLQTTNCALVSPLISLDVFRF----CKWKNNLAPISHLLDRFGVRES 223

Query: 288 DQK-LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKK 344
            +  + F AG+MFWV  +A   I +        P      +G   HA ER     ++ 
Sbjct: 224 PEDFICFPAGSMFWVDFKAAVLIASCFEESR-VPPEPLPSNGSYLHAFERLVPYILES 280


>gi|221634514|ref|YP_002523202.1| hypothetical protein RSKD131_4489 [Rhodobacter sphaeroides KD131]
 gi|221163387|gb|ACM04349.1| Hypothetical Protein RSKD131_4489 [Rhodobacter sphaeroides KD131]
          Length = 1042

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 17/249 (6%)

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTE-SASIKSEILKIFPAARIHIMENHG 177
           A ++H++++D+  ++   L +L  S D  VTL +      +  +   FP A I  +EN G
Sbjct: 8   AAIIHVWHLDVLDDLTEALEHLHGSADQFVTLPSSFRQEQRDRVTAAFPKATIVEVENRG 67

Query: 178 RDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKI 237
           +D+     L++   L  YD++CKIH KK           + WRR L   +LG+   V  I
Sbjct: 68  QDIGALFQLMQKVNLGRYDFICKIHTKKGPNMP------EEWRRALLDGVLGSKRQVTHI 121

Query: 238 IRTFDTHRDIGMIGSRA-YRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAG 296
           + +F     + + G+R  + Y   Y +   +  K  E   +L G      + +   F AG
Sbjct: 122 VESFRADPKVMLAGARQLFVYGPAYLE--PNADKVAEDYASLIG--DFDVRSEDWGFIAG 177

Query: 297 TMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCIL 356
           T FW+RT  L  +    +            DG   HA ER F L V      +  +   L
Sbjct: 178 TCFWIRTSILQEMAACAV---DFLPADYVTDGAPAHAAERMFGLCVALRGGTV--LLQDL 232

Query: 357 GYRKSLSQN 365
            +   L + 
Sbjct: 233 RFADRLPET 241


>gi|158422520|ref|YP_001523812.1| putative lipopolysaccharide biosynthesis protein [Azorhizobium
           caulinodans ORS 571]
 gi|158329409|dbj|BAF86894.1| putative lipopolysaccharide biosynthesis protein [Azorhizobium
           caulinodans ORS 571]
          Length = 661

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 108/267 (40%), Gaps = 15/267 (5%)

Query: 100 GWESPAMGKVMQIAIK-AKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIK 158
           G   PA   V    ++   +A VVH YY DL   +   L        L VT   E A   
Sbjct: 381 GARRPAAAPVTPRPVRTGSLASVVHGYYEDLLPGLIAGLD----PAHLFVTTPPEKAEAV 436

Query: 159 SEILKIFPAARIHI-MENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGD 217
             +L     A     +EN GRDV PFL LL   +   YD V K+H K+S  +G    EG 
Sbjct: 437 RAVLARAAPAARLRVVENRGRDVRPFLSLLPELEAEGYDLVLKVHTKRSPHQG---KEGS 493

Query: 218 LWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICT 277
            W + L   LL       ++   F+ H  +G++G+  +        Y  S G N   +  
Sbjct: 494 DWLQRLSGPLLKL-ARSERLAPVFEAHPQMGLLGAAGHVLDGAL--YAGSAG-NAAWMRR 549

Query: 278 LAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERC 337
           LA  +G T       + AGTMF  R     P++                DG + HA ER 
Sbjct: 550 LAAELG-TGAPLTSPYVAGTMFVARLGIFAPLRGASELLDLFDTDMGLKDGTLAHAFERF 608

Query: 338 FSLSVKKANFRISDVDCILGYRKSLSQ 364
           F +   +A   + +V    G+ + +++
Sbjct: 609 FGVLAAEAGLSVGEVAAD-GHVEPVAE 634


>gi|77404644|ref|YP_345218.1| glycosyltransferase [Rhodobacter sphaeroides 2.4.1]
 gi|77390294|gb|ABA81477.1| possible glycosyltransferase [Rhodobacter sphaeroides 2.4.1]
          Length = 793

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 15/255 (5%)

Query: 77  LYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANL 136
              M R+L    +R+      +H     A     +     + ++ VH +Y D   +    
Sbjct: 547 RRRMWRDLAEVEERLADADNWVHRKLRIAPYGTAEATELPRFSLHVHAFYTDDLAQDVRR 606

Query: 137 LSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSN 194
            +    +  + VT  ++  +  I++ +  +  A  + +  N GRD+LPFL L      + 
Sbjct: 607 HAAYRCASRIVVTTDSDRKADEIRTLMAAVGLAPEVLVRPNRGRDILPFLQLFLPGGAAG 666

Query: 195 YDYV-CKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSR 253
            D + C +H KKS     S   GD+WR +L   LLG    +         +  +G++   
Sbjct: 667 EDEIWCHLHQKKSLATTDS---GDIWRAFLLRILLGDEASLSDAATNL-RNPGVGLVAP- 721

Query: 254 AYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLR 313
                  +  Y      +R ++  +A R+     D  L F  G MF+VR+  +  + +L 
Sbjct: 722 -------FDPYFIPWDASRALLPRVAPRLPGPLPDNPLLFPVGNMFFVRSAVVRAMNDLF 774

Query: 314 LSRYFEPKVHKALDG 328
            + Y  P       G
Sbjct: 775 GAGYPGPTNPFPTTG 789


>gi|297182567|gb|ADI18727.1| lipopolysaccharide biosynthesis protein [uncultured Rhizobiales
           bacterium HF4000_32B18]
          Length = 887

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 98/250 (39%), Gaps = 21/250 (8%)

Query: 107 GKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFP 166
           G+          ++ VH +Y D + E     +    +  +  T  TE+ + +        
Sbjct: 635 GETDAEDDPPPYSVHVHAHYTDGFAEDLAGFAAWRHAARVVATTDTEAKAAEIAAAGRNG 694

Query: 167 AARI--HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLF 224
              I   ++ N GRDVLPFL L +  +  N    C +H KKS   G +   G +WR +L 
Sbjct: 695 GVAIETRVVANRGRDVLPFLELFDGSEDDN-ALWCHVHLKKSVGLGPTSP-GAVWRAFLM 752

Query: 225 YDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG- 283
             LLG P  +   +       + G++G+        +  Y      +R ++  L  R+  
Sbjct: 753 RILLGGPERLSTAL-ALIRAPEAGLVGA--------FDPYVMGWTGSRRLLAPLQARLDG 803

Query: 284 -------ITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
                      D  L F  G MFWV+   ++ ++ L  + Y  P      DG + H +ER
Sbjct: 804 WEADGGRRPLPDHPLLFPVGDMFWVKAGVVNAMRRLFGADYPWPGEPLPGDGTVYHLIER 863

Query: 337 CFSLSVKKAN 346
            +  +   A 
Sbjct: 864 LWPTAAALAG 873


>gi|50982351|gb|AAT91804.1| hypothetical protein [Yersinia enterocolitica]
          Length = 358

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/317 (19%), Positives = 108/317 (34%), Gaps = 33/317 (10%)

Query: 42  FWTLFYKRSKKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGW 101
              L   +     Y+ +  +              NL + E+  H          ++    
Sbjct: 66  LSNLVLSQKPAGKYNSSGFIDISKLDENNNIYSINLLLSEKNKHVSNDGSFELNKIKPNT 125

Query: 102 ESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEI 161
           ++             K  I+VH +Y     EI N L      +D+ +T    +  I  + 
Sbjct: 126 DN-------------KKLIIVHAFYQREAEEIFNRLVAF-TDYDIVITSPYNN--IICKA 169

Query: 162 LKIFPAARI--HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLW 219
            +I    R+   IM N+GRD+LPFLI L+   +  Y+Y  K+H K+S+    +      W
Sbjct: 170 KEILGQERVIGFIMPNYGRDILPFLICLQLIVIEKYEYFVKVHTKRSQHLNDNG----AW 225

Query: 220 RRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLA 279
                  L+G       +                   Y          +  N   +  L 
Sbjct: 226 FNNNLDYLVGNKNATDGLFSIMSDD--------EPQIYGEYILPIQDHIANNIHWLTYLL 277

Query: 280 GRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFS 339
            +   + +     F  GTMF      L  I++L+L  +   K +  LDG   HA+ER F 
Sbjct: 278 EKEPASVE---ASFIPGTMFIGNRAFLVLIRDLQLHLFQIEKENGQLDGCCVHAIERYFG 334

Query: 340 LSVKKANFRISDVDCIL 356
                   +   ++ ++
Sbjct: 335 YIASVNGGKCCSIETLI 351


>gi|14090418|gb|AAK53494.1| putative methyltransferase [Xanthomonas campestris pv. campestris]
          Length = 212

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 13/181 (7%)

Query: 106 MGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKI 164
              V          +V+H +Y+D+  E+ + +        + +T   T+   +   I + 
Sbjct: 37  APDVATEICSPSACVVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVIEVTKCIQRR 96

Query: 165 FPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLF 224
              A +   EN GRD+LPFL +       N   V K+H KKS  +     +G+ WR  + 
Sbjct: 97  GIQAEVEGFENRGRDILPFLHVANRLLDENVQLVLKLHTKKSTHRD----DGNAWRGEML 152

Query: 225 YDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREM--ICTLAGRM 282
             LLG P  V  I+  F T   +G+     +  P      T  +G N E   +   + R+
Sbjct: 153 TALLG-PQRVDAIVNAFSTDPLVGLAAPEDHLLP-----VTEFIGGNAERTGLSYCSHRL 206

Query: 283 G 283
           G
Sbjct: 207 G 207


>gi|301632931|ref|XP_002945533.1| PREDICTED: o-antigen export system ATP-binding protein rfbB-like,
           partial [Xenopus (Silurana) tropicalis]
          Length = 367

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 192 LSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIG 251
           +  Y  + ++H K+S         G+ WR  L+  L G+   V  I+ TF+TH  +GM+ 
Sbjct: 201 IPRYALILRLHSKRSLH--IPGQVGEEWRALLYTSLAGSRQRVNAIVDTFNTHPKLGMLC 258

Query: 252 SRAYRYPNKYCDYTCSLGKNREMICTLAGRMGIT-FQDQKLDFFAGTMFWVRTEALDPIK 310
                +           G N + +C L    GIT   DQ +DF  G+MFW R +AL    
Sbjct: 259 PAVIDHYAD----CLHFGGNYKRMCALLQPHGITLPPDQPIDFPMGSMFWCRPQALSVWL 314

Query: 311 NLRLSRYFEPKVHKA---LDGEIEHAVERCFSLSVKKANFRISDVDCILG 357
               +       +      DG + HA+ER F             V  +L 
Sbjct: 315 EPGFTFDDFTPTNDLDTDRDGTLAHALERLFFFGCGLKGLGWGRVPELLP 364


>gi|291520449|emb|CBK75670.1| Lipopolysaccharide biosynthesis protein [Butyrivibrio fibrisolvens
           16/4]
          Length = 486

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 5/174 (2%)

Query: 117 KIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESAS---IKSEILKIFPAARIHIM 173
           K+A+V HLYY++++    + L+ +    D+ +T  ++      I+    K      + + 
Sbjct: 291 KVAVVAHLYYVEMFELCMDYLAKVPYGIDIIITTNSDDKKQNIIEVASEKGVKLTEVIVA 350

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGV 233
           EN GR++   L+      L  Y Y C +H KKS  K +    G  +R  L+   L + G 
Sbjct: 351 ENRGRELAALLVGCGK-FLLKYKYFCFVHDKKSSAKEH-LSVGLAFRDILWDSSLYSEGY 408

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQ 287
           +  II  F+ +  +G+         + +  +      N E    L+  + I   
Sbjct: 409 IRNIIDMFEQNECMGLAVPPTVYCGSYFYPFPDYWVGNYEKTIELSKILNINVD 462


>gi|291520444|emb|CBK75665.1| Lipopolysaccharide biosynthesis protein [Butyrivibrio fibrisolvens
           16/4]
          Length = 424

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 2/139 (1%)

Query: 216 GDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMI 275
           G  +   ++  LLG+  +V +++  F   + +G++      +   +     S     +  
Sbjct: 7   GRDFNNRIWQSLLGSKELVEEVLSAFSDEKYLGLLMPSMVTHGEYFHTAIDSWTICYDGT 66

Query: 276 CTLAGRMGITFQD--QKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
             LA ++G+       +     GT FW RT+AL+ +     S    P     +DG I H 
Sbjct: 67  VELAKKIGLNVPIYGDRNPLSLGTAFWARTKALEKLFEYNFSYDMFPGEPFPVDGSISHY 126

Query: 334 VERCFSLSVKKANFRISDV 352
           +ER F      A +    V
Sbjct: 127 IERIFPYVALDAGYYTGIV 145


>gi|148238469|ref|YP_001223856.1| sulfotransferase [Synechococcus sp. WH 7803]
 gi|147847008|emb|CAK22559.1| Possible sulfotransferase [Synechococcus sp. WH 7803]
          Length = 476

 Score =  114 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 8/154 (5%)

Query: 189 TEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIG 248
            ++L  +D V   H K++      +  G+ WR+ L       P    +  +T     + G
Sbjct: 4   RDRLKEFDLVVHCHTKRTPHAPDGF--GESWRQSLLQCTFPNPDRCQE-FQTLLHKPEAG 60

Query: 249 MIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLD-FFAGTMFWVRTEALD 307
           +I    +R    +  +  + G N      L   MG T +   L  F AG+ FW R ++L 
Sbjct: 61  LIMPWPHR----FVAHNVNWGSNFTQTRALMNLMGHTIRRDTLLAFPAGSFFWARVDSLL 116

Query: 308 PIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLS 341
            + +L L            DG + H++ERC  L 
Sbjct: 117 ALLDLTLRWEDFAAEPLPGDGRLAHSLERCLGLL 150


>gi|308813905|ref|XP_003084258.1| conserved domain protein (ISS) [Ostreococcus tauri]
 gi|116056142|emb|CAL58323.1| conserved domain protein (ISS) [Ostreococcus tauri]
          Length = 684

 Score = 84.9 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 86/250 (34%), Gaps = 55/250 (22%)

Query: 142 ISFDLHVTLVT------ESASIKSEILKIFPAARIHIMENHGRDVLPFLILLET--EQLS 193
           +   L+++L        E A      L+     R+  +++ G D+  FL  L     +L 
Sbjct: 103 VQLQLYLSLTPTVANAPEVAYFTERFLRNEKNIRVVHVKDEGYDIGAFLKQLHRFRHELQ 162

Query: 194 NYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSR 253
            + Y+ K+H K             +W       L G+   V  I++ F+T   + ++   
Sbjct: 163 VHQYILKVHSKSDP----------IWLERAVESLCGSEHQVKSILKAFETQSTLDIVSPM 212

Query: 254 AY-----------------RYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFF-- 294
                              +Y NK    T    K    +  L  ++G+        +   
Sbjct: 213 GSTFSATTSKDAVFPHLKRKYFNKVDLATAFDDKTMHTMERLCAQLGLEACPYFEKYLAS 272

Query: 295 --AGTMFWVR---------TEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVK 343
             AGTMFW R             + I+N  LS+ +      + +  IEHA+ER      +
Sbjct: 273 ITAGTMFWARNSRLYTEHLPRLFESIRN-ELSQDY------SNNNRIEHALERLIPTLSR 325

Query: 344 KANFRISDVD 353
                I D+ 
Sbjct: 326 LNGRMIGDIQ 335


>gi|291520445|emb|CBK75666.1| Lipopolysaccharide biosynthesis protein [Butyrivibrio fibrisolvens
           16/4]
          Length = 109

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 115 KAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVTESA--SIKSEILKIF--PAARI 170
           + + A+  +L++ DL+ E     SNL    D++V   TE     I   I K+      ++
Sbjct: 13  QNRYAVFAYLFFDDLFEESLRYFSNLPNYVDIYVATNTEEKVDVINGYIPKMLFRHNVKV 72

Query: 171 HIMENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
            +  N GRDV   L+LL+    SNYD +C +H K
Sbjct: 73  LLHNNKGRDVSALLVLLKR-YYSNYDVICFVHDK 105


>gi|329944274|ref|ZP_08292533.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328531004|gb|EGF57860.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 699

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 88/262 (33%), Gaps = 47/262 (17%)

Query: 130 WIEIANLLSNLSISFDLHVTLVTE--SASIKSEILKIFPAARIHIMENHGRDVLPFLILL 187
             ++A  L++L   + + VT  +E  +A ++    +     ++  ++  G   + FL   
Sbjct: 341 ADDLAERLASLPEHWRVVVTSPSELNAADLERVTGRRTTFRKVRDLDPRG--TIAFLTEC 398

Query: 188 ETE------------------------QLSNYDYVCKIHGKKS--KRKGYSWWEGDLWRR 221
           +                          ++   D V  I    S     G S    D+ RR
Sbjct: 399 DDLWDPAHAGDVGASDGGDGTDTTDTAEVDRVDLVLTI----SAGPLSGSSERADDVARR 454

Query: 222 WLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGR 281
            +   LL +PG V  ++  F  H  +G++   A      Y                L+ R
Sbjct: 455 QVLDCLLASPGYVAGLLDLFGRHPSLGVVMPAACHIGQPY--VGPQWDGLVGAADALSRR 512

Query: 282 MGIT--FQDQKLDFFAGTMFWVRTEALDPIKN-----LRLSRYFEPKVHKALD----GEI 330
           +G+T    +       G+MF  R EAL  +       +RL+    P   ++++       
Sbjct: 513 LGLTAALDEIAPVAPVGSMFLARPEALRTLSEGAKELVRLTEQAAPSTERSVERLRRARA 572

Query: 331 EHAVERCFSLSVKKANFRISDV 352
              +E     +     +   +V
Sbjct: 573 AEVLELLTVYAAMSNGYHPREV 594


>gi|291520448|emb|CBK75669.1| Lipopolysaccharide biosynthesis protein [Butyrivibrio fibrisolvens
           16/4]
          Length = 625

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 24/56 (42%)

Query: 297 TMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDV 352
           + FW RTEAL  +     S  F PK     +    HA+ER F      A +  S +
Sbjct: 4   SCFWCRTEALKKLLEYDFSYNFFPKEPMDANLTTSHAIERIFPYVACDAGYYTSTI 59



 Score = 44.5 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAG 280
           ++ F +L+   G +  I   F  ++ +G++G+       +         K  + I     
Sbjct: 421 QYTFDELIKNNGYISAICEVFKENQSVGVVGNIYGEIIFQINSNMNIYSKYEDEILEFEK 480

Query: 281 RMGITFQ---DQKLDFFAGTMFWVRTEALDPIKNLR 313
           R    F       L  + G  FW+R +AL  I +  
Sbjct: 481 RFNFDFNRGGKHSLLNYNG--FWLRRDALQMIADCE 514


>gi|320531345|ref|ZP_08032317.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320136436|gb|EFW28412.1| rhamnan synthesis protein F [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 678

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 69/204 (33%), Gaps = 30/204 (14%)

Query: 130 WIEIANLLSNLSISFDLHVTLVTE-SASIKSEILKIFPAAR-------------IHIMEN 175
              +A  L++L   + + VT  T   A+    +    PA               +  ++ 
Sbjct: 323 ADGLAQRLASLPAHWRVVVTSPTHLDAADLERLTGRRPADEAAAPGGAAVAFRAVRDLDP 382

Query: 176 HGRDVLPFLILLETEQLSNY--------DYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDL 227
            G   +PFL                   D V +I    S   G      D+ RR +   L
Sbjct: 383 RG--TIPFLTECGDLWDPGRATGSDGGGDLVLRI-TVGSP-SGPESKADDVARRQVLDCL 438

Query: 228 LGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQ 287
           L +PG    +I  F+ H  +G+    A      +     +         TL+ R+G+T +
Sbjct: 439 LASPGYTAGLIDLFERHPGLGVAMPAASHIGQAHG--GPTWDGLAGAAKTLSRRLGLTVE 496

Query: 288 DQKLDF--FAGTMFWVRTEALDPI 309
              +      G MF  R EAL  +
Sbjct: 497 LDPVAPVVPVGAMFMARPEALRTL 520


>gi|324991549|gb|EGC23482.1| rhamnosyltransferase [Streptococcus sanguinis SK353]
          Length = 556

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 78/261 (29%), Gaps = 31/261 (11%)

Query: 109 VMQIAIKAKIA--IVVHLYYID--LWIEIANLLSNLSISFDLHVTLV-TESASIKSEILK 163
           + Q     + A  +++H++  D  ++ +  + L +LS  +   VT    E        L 
Sbjct: 273 LSQATSNYRAALPVLLHIHVTDFPIFQQYQDKLFSLSSQYQYLVTTDQPEVLKQLQTALG 332

Query: 164 IFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRR 221
                   ++    R  L  L   + E L +Y Y+  +    S  +  G         R 
Sbjct: 333 HLGNKVQIVLSQKSRAWLAMLE--QKEILQDYAYIGHL----STHRLVGNQAVFDQAMRS 386

Query: 222 WLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGR 281
            L   ++         I   +    +G++       P    D        R  +  +   
Sbjct: 387 DLINMMV---DYADASIEALEKESAVGLVIPD---LPRLVRDGLFESEPPRPRLAAVWQE 440

Query: 282 MGITFQDQKLDFFA-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVER 336
            G+      +   +     G+  W +  AL  +  ++          +  D      +E 
Sbjct: 441 AGLHKSFDFIITPSLTRVYGSFVWFKYSALASLFQMKSLESLPSFEQELSD-----VLEH 495

Query: 337 CFSLSV--KKANFRISDVDCI 355
                      +F+I  +  +
Sbjct: 496 LLVYLAWDSHYDFKIMPLSSL 516


>gi|325690859|gb|EGD32860.1| rhamnosyltransferase [Streptococcus sanguinis SK115]
          Length = 556

 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 73/248 (29%), Gaps = 29/248 (11%)

Query: 120 IVVHLYYIDL--WIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMENH 176
           +++H++  DL  + +  N L +LS  +   VT+   E        L         ++   
Sbjct: 286 VLLHIHVTDLPIFQQYQNKLFSLSSQYQYLVTVTQPEMLKQLQTTLAHLGDKVQLVLSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVV 234
               L  L   + E L +Y Y+  +    S  +            R  L   ++      
Sbjct: 346 SHAWLAMLE--QKEILQDYAYIGHL----STHRIMENQAVFDQAMRSDLINLMV---DYA 396

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFF 294
              I   +    +G++     R        +  L   R  +  +    G+      +   
Sbjct: 397 DASIEALEQESAVGLVIPDLPRLVRDGLFESEPL---RPRLAAIWQEAGLHKSFDFMTPP 453

Query: 295 A-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANF 347
           +     G   W +  AL  +  ++          +  D      +E            +F
Sbjct: 454 SLTRVYGGFVWFKYSALASLFQMKSLESLPSSEQELSD-----VLEHLLVYLAWDSHYDF 508

Query: 348 RISDVDCI 355
           +I  +  +
Sbjct: 509 KIMPLSSL 516


>gi|326772087|ref|ZP_08231372.1| hypothetical protein HMPREF0059_00469 [Actinomyces viscosus C505]
 gi|326638220|gb|EGE39121.1| hypothetical protein HMPREF0059_00469 [Actinomyces viscosus C505]
          Length = 681

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 221 RWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAG 280
           R     LL +PG    +I  F  H  +G+    A      +     +          L+ 
Sbjct: 439 RQALDCLLDSPGYTAGLIDLFARHPGLGVAMPAAGHIGQAHG--GPTWDGLAGAAKALSR 496

Query: 281 RMGITFQDQKLDF--FAGTMFWVRTEALDPI 309
           R+G++ +   L      G MF  R EAL  +
Sbjct: 497 RLGLSAELDPLAPVAPPGAMFMARPEALRTL 527


>gi|324993910|gb|EGC25829.1| rhamnosyltransferase [Streptococcus sanguinis SK405]
 gi|324994771|gb|EGC26684.1| rhamnosyltransferase [Streptococcus sanguinis SK678]
          Length = 556

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 71/242 (29%), Gaps = 29/242 (11%)

Query: 120 IVVHLYYID--LWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENH 176
           +++H++  D  ++ +  + L +LS  ++  +T    E        L         ++   
Sbjct: 286 VLLHIHVTDFPIFQQYQDKLFSLSSQYEYLLTTNQPEVLKQLQTALGHLGNKVQLVLSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVV 234
            R  L  L   + E L +Y Y+  +    S  +  G         R  L   ++      
Sbjct: 346 SRAWLAMLE--QKEILQDYAYIGHL----STHRLVGNQAVFDQAMRSDLINMMV---DYA 396

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFF 294
              I   +    +G++       P    D           +  +     +      +   
Sbjct: 397 DASIEALEQESAVGLVIPD---LPRLVRDGLFESEPPLPSLTAVWQEAVLHKSFDFMTAP 453

Query: 295 A-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANF 347
           +     G   W +  AL  +  ++          +  D      +E      V     +F
Sbjct: 454 SLTRVYGGFLWFKYSALTSLFRMKSLESLPSSEQELSD-----VLEHLLVYIVWDSHYDF 508

Query: 348 RI 349
           +I
Sbjct: 509 KI 510


>gi|327489888|gb|EGF21677.1| rhamnosyltransferase [Streptococcus sanguinis SK1058]
          Length = 556

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 73/266 (27%), Gaps = 28/266 (10%)

Query: 95  PQLLHGWESPAMGKVMQ-IAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL-VT 152
           P L    E   + +          + + +H+    ++ +  + L +LS  ++  +T    
Sbjct: 262 PDLPCLLEDKYLSQATSNYRTDQPVLLHIHVTDFPIFQQYQDKLFSLSSQYEYLLTTNQP 321

Query: 153 ESASIKSEILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--G 210
           E        L         ++    R  L  L   + E L +Y Y+  +    S  +  G
Sbjct: 322 EVLKQLQTALGHLGNKVQLVLSQKSRAWLAMLE--QKEILQDYAYIGHL----STHRLVG 375

Query: 211 YSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK 270
                    R  L   ++         I   +    +G++       P    D       
Sbjct: 376 NQAVFDQAMRSDLINMMV---DYADASIEALEQESAVGLVIPD---LPRLVRDGLFESEP 429

Query: 271 NREMICTLAGRMGITFQDQKLDFFA-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKA 325
               +  +     +      +   +     G   W +  AL  +  ++          + 
Sbjct: 430 PLPSLTAVWQEAVLHKSFDFMTAPSLTRVYGGFLWFKYSALTSLFRMKSLESLPSSEQEL 489

Query: 326 LDGEIEHAVERCFSLSV--KKANFRI 349
            D      +E            +F+I
Sbjct: 490 SD-----VLEHLLVYIAWDSHYDFKI 510


>gi|327463172|gb|EGF09493.1| rhamnosyltransferase [Streptococcus sanguinis SK1]
 gi|327474781|gb|EGF20186.1| rhamnosyltransferase [Streptococcus sanguinis SK408]
          Length = 556

 Score = 61.4 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 70/242 (28%), Gaps = 29/242 (11%)

Query: 120 IVVHLYYID--LWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENH 176
           +++H++  D  ++ +  + L +LS  ++  +T    E        L         ++   
Sbjct: 286 VLLHIHVTDFPIFQQYQDKLFSLSSQYEYLLTTNQPEVLKQLQTALGHLGNKVQLVLSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVV 234
            R  L  L   + E L +Y Y+  +    S  +  G         R  L   ++      
Sbjct: 346 SRAWLAMLE--QKEILQDYAYIGHL----STHRLVGNQAVFDQAMRSDLINMMV---DYA 396

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFF 294
              I   +    +G++       P    D           +  +     +      +   
Sbjct: 397 DASIEALEQESAVGLVIPD---LPRLVRDGLFESEPPLPSLTAVWQEAVLHKSFDFMTAP 453

Query: 295 A-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANF 347
           +     G   W +  AL  +  ++          +  D      +E            +F
Sbjct: 454 SLTRVYGGFLWFKYSALTSLFRMKSLESLPSSEQELSD-----VLEHLLVYIAWDSHYDF 508

Query: 348 RI 349
           +I
Sbjct: 509 KI 510


>gi|327470704|gb|EGF16160.1| rhamnosyltransferase [Streptococcus sanguinis SK330]
          Length = 556

 Score = 61.4 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 72/248 (29%), Gaps = 29/248 (11%)

Query: 120 IVVHLYYID--LWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMENH 176
           +++H++  D  ++ +  + L +LS  +   VT+   E        L         ++   
Sbjct: 286 VLLHIHVTDFPIFQQYQDKLFSLSSQYQYLVTVTQPEMLKQLQTTLAHLGDKVQLVLSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVV 234
               L  L   + E L +Y Y+  +    S  +            R  L   ++      
Sbjct: 346 SHAWLAMLE--QKEILQDYAYIGHL----STHRIMENQAVFDQAMRSDLINMMV---YYA 396

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFF 294
              I   +    +G++       P    D        R  +  +    G+      +   
Sbjct: 397 DTSIEALEQESAVGLVIPD---LPRLVRDGLFESEPPRPRLAAIWQEAGLHKSFDFMTPP 453

Query: 295 A-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANF 347
           +     G   W +  AL  +  ++          +  D      +E            +F
Sbjct: 454 SLTRVYGGFVWFKYSALASLFQMKSLESLPSSEQELSD-----VLEHLLVYLAWDSHYDF 508

Query: 348 RISDVDCI 355
           +I  +  +
Sbjct: 509 KIMPLSSL 516


>gi|325067617|ref|ZP_08126290.1| hypothetical protein AoriK_07344 [Actinomyces oris K20]
          Length = 233

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 13/133 (9%)

Query: 231 PGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQK 290
           PG V  +I  F  H  +G+    A      +     +          L+ R+G+T +   
Sbjct: 1   PGYVAGLIDLFARHPGLGVAMPAAGHIGQAHG--GATWDGLAGAATALSRRLGLTVELDP 58

Query: 291 LDF--FAGTMFWVRTEALDPIKN-----LRLSRYFEPKVHKALD----GEIEHAVERCFS 339
           L      G MF  R  AL  +       +RL+    P   ++++          +E    
Sbjct: 59  LAPVVPVGAMFLARPAALRTLSEGAKELVRLTEQAAPSAEQSVERLKRARAAEVLELLTV 118

Query: 340 LSVKKANFRISDV 352
            +   + +   +V
Sbjct: 119 YAAMSSGYHPREV 131


>gi|332361934|gb|EGJ39736.1| rhamnosyltransferase [Streptococcus sanguinis SK49]
          Length = 556

 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 75/247 (30%), Gaps = 27/247 (10%)

Query: 120 IVVHLYYIDL--WIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMENH 176
           +++H++  DL  + +  + L +LS  +   VT+   E        L         ++   
Sbjct: 286 VLLHIHVTDLPIFQQYQDKLFSLSSQYQYLVTVAQPEMLKQLQTALGHLGNKVQLVLSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG-YSWWEGDLWRRWLFYDLLGAPGVVF 235
               +  L   + E L NY Y+  +    S  +   +    D   R    +L+       
Sbjct: 346 SYAWIAMLE--QKEILQNYAYIGHL----STHRLVENQAAFDQTMRSDLINLMV--DYAD 397

Query: 236 KIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFA 295
             I   +    +G++       P    D        R  +  +    G+      +   +
Sbjct: 398 ASIEALEKEAAVGLVIPD---LPRLVRDGLFESEPARPRLAAIWQEAGLHKSFDFMTAPS 454

Query: 296 -----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANFR 348
                G   W +  AL  +  ++          +  D      +E+           +F+
Sbjct: 455 LTRVYGGFLWFKYSALASLFPMKSLENSPSSEQELSD-----VLEQLLVYLAWDNHYDFK 509

Query: 349 ISDVDCI 355
           I  +  +
Sbjct: 510 IMPLSSL 516


>gi|328946538|gb|EGG40677.1| rhamnosyltransferase [Streptococcus sanguinis SK1087]
          Length = 556

 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 70/249 (28%), Gaps = 31/249 (12%)

Query: 120 IVVHLYYIDLWIEIANL---LSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMEN 175
           +++H++  D           L +LS  +   VT    E        L         ++  
Sbjct: 286 VLLHIHVTDF-PIFQQYQDNLFSLSSQYQYLVTTGQPEVLKQLQTSLAHLGNKVQIVLSQ 344

Query: 176 HGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGV 233
                L  L   + E L NY Y+  +    S  +            R  L   ++ +   
Sbjct: 345 KSHAWLAMLE--QKEILQNYAYIGHL----STHRLVENQAVFDQAMRSDLINMMVDSAD- 397

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
               I   + + D+G++       P    D        R  + ++    G+      +  
Sbjct: 398 --ASIEALEKNSDLGLVIPD---LPRLVRDGLFESEPPRPRLTSVWQDAGLHKSFNFMST 452

Query: 294 FA-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKAN 346
            +     G   W +  AL     ++          +  D      +E            +
Sbjct: 453 PSLTRVYGGFLWFKYSALASWFQMKSLESLPSSDQELSD-----VLEHLLVYLAWDSHYD 507

Query: 347 FRISDVDCI 355
           F+I  +  +
Sbjct: 508 FKIMPLSSL 516


>gi|325694904|gb|EGD36809.1| rhamnosyltransferase [Streptococcus sanguinis SK150]
          Length = 556

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 66/253 (26%), Gaps = 27/253 (10%)

Query: 107 GKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIF 165
                      + + +H+    ++ +    L +L+  +   VT    E        L   
Sbjct: 275 QSTSSYRTNQSVLLHIHVTNFPIFQQYQEKLFSLASQYQYLVTTNLPEMLKQLQTALAHL 334

Query: 166 PAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWL 223
                 ++      +L  L   + E L NY Y+  +    S  +            R  L
Sbjct: 335 DDKVQIVLSQKSHALLAMLE--QKEILQNYVYIGHL----STHRIMENQAVFDQAMRSDL 388

Query: 224 FYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMG 283
              ++         I   +    +G++       P    D           +  +    G
Sbjct: 389 INMMV---DYADASIEALEQESAVGLVIPD---LPRLVRDGLFESEPPLPSLTAVWQEAG 442

Query: 284 ITFQDQKLDFFA-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCF 338
           +      +   +     G   W +  AL  +  ++          +  D      +E   
Sbjct: 443 LHKSFDFMTAPSLTRVYGGFLWFKYSALTSLFQMKSLESLPSSEQELSD-----VLEHLL 497

Query: 339 SLSV--KKANFRI 349
                    +F+I
Sbjct: 498 VYIAWDSHYDFKI 510


>gi|332359457|gb|EGJ37277.1| rhamnosyltransferase [Streptococcus sanguinis SK355]
          Length = 556

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 64/243 (26%), Gaps = 31/243 (12%)

Query: 120 IVVHLYYIDLWIEIANL---LSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMEN 175
           +++H++  D           L +L   +   VT    E        L         ++  
Sbjct: 286 VLLHIHVTDF-PIFLQYQDKLFSLLSQYQYLVTTDQPEVLKQLQTALVHLGNKVQLVLSQ 344

Query: 176 HGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGV 233
                L  L   + E L NY Y+  +    S  +            R  L   ++     
Sbjct: 345 KSHAWLAMLE--QKEILQNYAYIGHL----STHRLVENQAIFDQAIRSDLINMMV---DY 395

Query: 234 VFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF 293
               I   +    +G++       P    D        R  +  +    G+      +  
Sbjct: 396 ADASIEALEQESALGLVIPD---LPRLVRDGLFESEPPRSWLAAVWQEAGLHKSFDFMIA 452

Query: 294 FA-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKAN 346
            +     G   W +  AL  +  ++          +  D      +E            +
Sbjct: 453 PSLTRVYGGFLWFKYSALASVFQMKSLESLPSSDQELSD-----VLEHLLVYLAWDSHYD 507

Query: 347 FRI 349
           F+I
Sbjct: 508 FKI 510


>gi|332362506|gb|EGJ40306.1| rhamnosyltransferase [Streptococcus sanguinis SK1056]
          Length = 556

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 73/248 (29%), Gaps = 29/248 (11%)

Query: 120 IVVHLYYIDL--WIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMENH 176
           +++H++  DL  + +  N L +LS  +   VT+   E        L         ++   
Sbjct: 286 VLLHIHVTDLPIFQQYQNKLFSLSSQYQYLVTVTQPEMLKQLQTTLAHLGDKVQLVLSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVV 234
               L  L   + E L +Y Y+  +    S  +            R  L   ++      
Sbjct: 346 SHAWLAMLE--QKEILQDYAYIGHL----STHRIMENQAVFDQAMRSDLINLMV---DYA 396

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFF 294
              I   +    +G++     R        +  L   R  +  +    G+      +   
Sbjct: 397 DASIEALEQESAVGLVIPDLPRLVRDGLFESEPL---RPRLAAIWQEAGLHKSFDFMTPP 453

Query: 295 A-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANF 347
           +     G   W +  AL  +  ++          +  D      +E            +F
Sbjct: 454 SLTRVYGGFVWFKYSALASVFRMKSLESLPSSEQEFSD-----VLEHLLVYLAWDNHYDF 508

Query: 348 RISDVDCI 355
           +I  +  +
Sbjct: 509 KIMPLSSL 516


>gi|325696073|gb|EGD37964.1| rhamnosyltransferase [Streptococcus sanguinis SK160]
          Length = 556

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 78/264 (29%), Gaps = 37/264 (14%)

Query: 109 VMQIAIKAKIA--IVVHLYYIDLWIEIANL---LSNLSISFDLHVTL--VTESASIKSEI 161
           + Q     + A  +++H++  D      +    L +LS  +   VT+        +++ +
Sbjct: 273 LSQATSNYRAAQPVLLHIHVTDF-PIFQHYQDKLFSLSSQYQYLVTVAQPEMLKQLQTAL 331

Query: 162 LKIFPAARIHIMENHGRDVLPFLI-LLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDL 218
             +    ++ + +        +L  L + E L +Y Y+  +    S  +           
Sbjct: 332 AHLGDKVQLVLSQAS----HAWLAMLDQKEILQDYAYIGHL----STHRLVENQAVFDQA 383

Query: 219 WRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTL 278
            R  L   ++         I   +    +G++       P    D        R  +  +
Sbjct: 384 MRSDLINMMV---YYADTSIEALEQESAVGLVIPD---LPRLVRDGLFESEPPRPRLAAI 437

Query: 279 AGRMGITFQDQKLDFFA-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHA 333
                +      +   +     G   W +  AL  +  ++          +  D      
Sbjct: 438 WQEADLHKSFDCMTPPSLTRVYGGFVWFKYSALASLFQMKSLESLPSSEQELSD-----V 492

Query: 334 VERCFSLSV--KKANFRISDVDCI 355
           +E            +F+I  +  +
Sbjct: 493 LEHLLVYLAWDSHYDFKIMPLSSL 516


>gi|327461067|gb|EGF07400.1| rhamnosyltransferase [Streptococcus sanguinis SK1057]
          Length = 556

 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 73/248 (29%), Gaps = 29/248 (11%)

Query: 120 IVVHLYYIDL--WIEIANLLSNLSISFDLHVTLV-TESASIKSEILKIFPAARIHIMENH 176
           +++H++  DL  + +  N L +LS  +   VT+   E        L         ++   
Sbjct: 286 VLLHIHVTDLPIFQQYQNKLFSLSSQYQYLVTVTQPEMLKQLQTTLAHLGDKVQLVLSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVV 234
               L  L   + E L +Y Y+  +    S  +            R  L   ++      
Sbjct: 346 SHAWLAMLE--QKEILQDYAYIGHL----STHRIMENQAVFDQAMRSDLINLMV---DYA 396

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFF 294
              I   +    +G++     R        +  L   R  +  +    G+      +   
Sbjct: 397 DASIEALEQESAVGLVIPDLPRLVRDGLFESEPL---RPRLAAIWQEAGLHKSFDFMTPP 453

Query: 295 A-----GTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANF 347
           +     G   W +  AL  +  ++          +  D      +E            +F
Sbjct: 454 SLTRVYGGFVWFKYSALASVFRMKSLESLPSSEQEFSD-----VLEHLLVYLAWDNHYDF 508

Query: 348 RISDVDCI 355
           +I  +  +
Sbjct: 509 KIMPLSSL 516


>gi|332367199|gb|EGJ44935.1| rhamnosyltransferase [Streptococcus sanguinis SK1059]
          Length = 556

 Score = 58.7 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 79/281 (28%), Gaps = 46/281 (16%)

Query: 95  PQLLHGWESPAMGKVMQ-IAIKAKIAIVVHL-------YYIDLWIEIANLLSNLSISFDL 146
           P L    +   + +          + + +H+       +Y D        L +LS  +  
Sbjct: 262 PDLPCLLQDKYLSQATSNYRADQPVLLHIHVTDFPIFQHYQD-------KLFSLSSQYQY 314

Query: 147 HVTL--VTESASIKSEILKIFPAARIHIMENHGRDVLPFLI-LLETEQLSNYDYVCKIHG 203
            VT+        +++ +  +    ++ + +        +L  L + E L +Y Y+  +  
Sbjct: 315 LVTVAQPEMLKQLQTALAHLGDKVQLVLSQAS----HAWLAMLDQKEILQDYAYIGHL-- 368

Query: 204 KKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKY 261
             S  +            R  L   ++         I   +    +G++       P   
Sbjct: 369 --STHRLVENQAVFDQAMRSDLINMMV---YYADTSIEALEQESAVGLVIPD---LPRLV 420

Query: 262 CDYTCSLGKNREMICTLAGRMGITFQDQKLDFFA-----GTMFWVRTEALDPIKNLRLSR 316
            D        R  +  +     +      +   +     G   W +  AL  +  ++   
Sbjct: 421 RDGLFESEPPRPRLAAIWQEADLHKSFDFMTPPSLTRVYGGFVWFKYSALASLFQMKSLE 480

Query: 317 YFEPKVHKALDGEIEHAVERCFSLSV--KKANFRISDVDCI 355
                  +  D      +E            +F+I  +  +
Sbjct: 481 SLPSSEQELSD-----VLEHLLVYLAWDSHYDFKIMPLSSL 516


>gi|315221431|ref|ZP_07863352.1| rhamnan synthesis protein F [Streptococcus anginosus F0211]
 gi|315189550|gb|EFU23244.1| rhamnan synthesis protein F [Streptococcus anginosus F0211]
          Length = 555

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 48/174 (27%), Gaps = 23/174 (13%)

Query: 182 PFLILL-ETEQLSNYDYVCKIHGKKSKRKGYSWWEG-DLW-RRWLFYDLLGAPGVVFKII 238
           P L +  + E+L  Y Y+  +    S         G D W R  LF  ++         I
Sbjct: 348 PLLAMFAQAERLKTYKYIGHL----STHTLIPEVAGLDQWMRDDLFNMMIENMNY---SI 400

Query: 239 RTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFF---- 294
              +   ++G+I             Y   L   +E +  L   +      +  D      
Sbjct: 401 NALEHCSNLGLIIPDLPSVVRNGLFYQKPL---KEEMEKLWKLLSCRKSFKFTDAVTLTR 457

Query: 295 -AGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANF 347
             G   W + EA++ +                    I    E          N+
Sbjct: 458 VYGGWMWFKYEAVESLFKASFKT--FSSYSLQEQSTIL---ENLLVYVAWDKNY 506


>gi|323351266|ref|ZP_08086922.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           sanguinis VMC66]
 gi|322122490|gb|EFX94201.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
           alpha-1,3-L-rhamnosyltransferase [Streptococcus
           sanguinis VMC66]
          Length = 556

 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 71/242 (29%), Gaps = 29/242 (11%)

Query: 120 IVVHLYYID--LWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENH 176
           +++H++  D  ++ +  + L +LS  ++  +T    E        L         ++   
Sbjct: 286 VLLHIHVTDFPIFQQYQDKLFSLSSQYEYLLTTNQPEVLKQLQTALGHLGNKVQIVLSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVV 234
            R  L  L   + E L +Y Y+  +    S  +            R  L   ++      
Sbjct: 346 SRAWLAMLE--QKEILQDYAYIGHL----STHRLVENQAVFDQAMRSDLINLMV---DYA 396

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF- 293
              I   +    +G++     R        T  L   R  +  +    G+      +   
Sbjct: 397 DASIEALEQESAVGLVIPDLPRLVRDGLFETEPL---RPSLSAVWQEAGLHKSFDFMTAS 453

Query: 294 ----FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANF 347
                 G   W +  AL  +  ++          +  D      +E            +F
Sbjct: 454 SLTRVYGGFLWFKNSALASLFQMKSLESLPSSDQELSD-----VLEHLLVYLAWDSHYDF 508

Query: 348 RI 349
           +I
Sbjct: 509 KI 510


>gi|125718317|ref|YP_001035450.1| lipopolysaccharide biosynthesis protein [Streptococcus sanguinis
           SK36]
 gi|125498234|gb|ABN44900.1| Lipopolysaccharide biosynthesis protein, putative [Streptococcus
           sanguinis SK36]
          Length = 556

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 68/242 (28%), Gaps = 29/242 (11%)

Query: 120 IVVHLYYID--LWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENH 176
           +++H++  D  ++ +  + L +LS  +   +T    E        L         I+   
Sbjct: 286 VLLHIHVTDFPIFQQYQDKLFSLSSQYQYLLTTNQPEVLKQLQTALGHLGNKVQIILSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVV 234
               L  L   + E L NY Y+  +    S  +            R  L   ++      
Sbjct: 346 SHAWLAMLE--QKEILQNYAYIGHL----STHRLVENQAVFDQAMRSDLINMMV---DYA 396

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF- 293
              I   +     G++       P    D    +   R  +  +    G+      +   
Sbjct: 397 DASIEALEQDSAEGLVIPD---LPRLVRDGLFEIEPPRPSLSAVWQEAGLHKSFDFMTAS 453

Query: 294 ----FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANF 347
                 G   W +  AL  +  ++          +  D      +E            +F
Sbjct: 454 SLTRVYGGFLWFKNSALASLFQMKSLESLPSSDQELSD-----VLEHLLVYLAWDSHYDF 508

Query: 348 RI 349
           +I
Sbjct: 509 KI 510


>gi|325687210|gb|EGD29232.1| rhamnosyltransferase [Streptococcus sanguinis SK72]
          Length = 556

 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 68/242 (28%), Gaps = 29/242 (11%)

Query: 120 IVVHLYYID--LWIEIANLLSNLSISFDLHVTL-VTESASIKSEILKIFPAARIHIMENH 176
           +++H++  D  ++ +  + L +LS  +   +T    E        L         I+   
Sbjct: 286 VLLHIHVTDFPIFQQYQDKLFSLSSQYQYLLTTNQPEVLKQLQTALGHLGNKVQIILSQK 345

Query: 177 GRDVLPFLILLETEQLSNYDYVCKIHGKKSKRK--GYSWWEGDLWRRWLFYDLLGAPGVV 234
               L  L   + E L NY Y+  +    S  +            R  L   ++      
Sbjct: 346 SHAWLAMLE--QKEILQNYAYIGHL----STHRLVENQAVFDQTMRSDLINMMV---DYA 396

Query: 235 FKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDF- 293
              I   +     G++       P    D    +   R  +  +    G+      +   
Sbjct: 397 DASIEALEQDSAEGLVIPD---LPRLVRDGLFEIEPPRPSLSAVWQEAGLHKSFDFMTAS 453

Query: 294 ----FAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSV--KKANF 347
                 G   W +  AL  +  ++          +  D      +E            +F
Sbjct: 454 SLTRVYGGFLWFKNSALASLFQMKSLESLPSSDQELSD-----VLEHLLVYLAWDSHYDF 508

Query: 348 RI 349
           +I
Sbjct: 509 KI 510


>gi|254431846|ref|ZP_05045549.1| hypothetical protein CPCC7001_1737 [Cyanobium sp. PCC 7001]
 gi|197626299|gb|EDY38858.1| hypothetical protein CPCC7001_1737 [Cyanobium sp. PCC 7001]
          Length = 205

 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 23/182 (12%)

Query: 172 IMENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAP 231
            + N+G D   F  L  +   S+     K+  KKS   G     G  W       +  + 
Sbjct: 29  RVTNYGEDWSSFHHLFYSGAFSSRGATFKLQTKKSSNLGADG--GMAWVDEALQPIASSY 86

Query: 232 GVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITF-QDQK 290
                +I+            +   +            G N +++     R+G+     ++
Sbjct: 87  RATATVIKNLK---------AGTIKLAASKLCKRTGFGANPQLVAEYIHRLGLNEQSAKR 137

Query: 291 LDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGE-------IEHAVERCFSLSVK 343
             F  G+MF    + L  +    L            DG          HA+ER F     
Sbjct: 138 QSFCMGSMFAADND-LIQLFYSSLGDVDY---RITSDGGSQFCGRYPGHAIERAFFYYSY 193

Query: 344 KA 345
           +A
Sbjct: 194 QA 195


>gi|160894490|ref|ZP_02075266.1| hypothetical protein CLOL250_02042 [Clostridium sp. L2-50]
 gi|156863801|gb|EDO57232.1| hypothetical protein CLOL250_02042 [Clostridium sp. L2-50]
          Length = 783

 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 81/290 (27%), Gaps = 48/290 (16%)

Query: 38  FFFWFWTLFYKRSKKLCYDENYVVAYGSRSGKKFFAQSNLYMMERELHFDGQRIHHFPQL 97
             F+   LF+   K+   D +  +   SR   +F  Q   Y     L    +       +
Sbjct: 227 CPFFKRKLFFYPMKEKIVDSSSYI---SRVFYQFIKQETPYDETLILKNLIRTAP-MQDI 282

Query: 98  LHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLS------ISFDLHVTLV 151
           + G     +       I  KIA+V+         E    L +           DL+    
Sbjct: 283 VDGLGLNVIPDSECERIAEKIAVVI--------DEDF-YLQHQPDIDDLETHADLYYWGS 333

Query: 152 TESASIKSE-------ILKIFPAARIHIMENHGRDVLPFLILLETEQLSNYDYVCKI-HG 203
            ES   K                A ++        V  F           Y+Y+C + + 
Sbjct: 334 EESFHQKKNWEEMHLLECTTGNFAEVYYA------VGAF--------AKEYEYICFLVNE 379

Query: 204 KKSKRKGYSWWEGDLWRRWLFYD-LLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYC 262
            +S            W   +  + +LG    +  I+   + +  IG++          Y 
Sbjct: 380 DRSYIAENLDNGHTGW---IIENSILGKGVSLGNIVSCLNDNSGIGLVYPPNSSQSLYYS 436

Query: 263 DYTCSLGKNREMICTLAGRMGITFQDQKLDFFAG---TMFWVRTEALDPI 309
                       I  +     I     K+    G     FW R++ L  +
Sbjct: 437 RQYKERELISCEIQQILEDSDIHLNIAKVRGSIGQYTGCFWCRSQVLQNL 486


>gi|254788145|ref|YP_003075574.1| glycosyltransferase family 2 domain-containing protein
           [Teredinibacter turnerae T7901]
 gi|237685039|gb|ACR12303.1| glycosyltransferase family 2 domain protein [Teredinibacter
           turnerae T7901]
          Length = 307

 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 32/131 (24%)

Query: 128 DLWIEIANLLSNLSISFDLHVTL----VTESASIKSEILKIFPAARIHIMENHG-RDVLP 182
           +   +  + + N ++  DL V +      E+ +I ++  + +P  ++   EN G R V P
Sbjct: 14  EFMRKTLDSVCNQTVPPDLWVVVDDGSTDETPAILADYSERYPFIQVITRENRGHRSVGP 73

Query: 183 -----FLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKI 237
                F    +   +S +DYVCK                      L  DL   P     +
Sbjct: 74  GVIEAFYYGYDKIDVSQFDYVCKF--------------------DLDLDL--PPRYFEIL 111

Query: 238 IRTFDTHRDIG 248
           I   + +  +G
Sbjct: 112 IDRMEKNPRLG 122


>gi|312278781|gb|ADQ63438.1| Rhamnosyltransferase [Streptococcus thermophilus ND03]
          Length = 547

 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 28/198 (14%)

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKIFPAARIHIME-- 174
           AI VH+   DL  E   + S+  +S   + TL +  +   +++ +L  F   R  ++   
Sbjct: 287 AIHVHI--SDL--ERLKVFSDKKLSAFYYFTLSSHLDKNIVENTLLNSFDKDRFQLVSQK 342

Query: 175 --NHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPG 232
             NH       + L    Q S YD+V   H    +  G      D   R    ++L    
Sbjct: 343 FDNH---YYALVSLAS--QFSEYDFVGHFHT---EDFGNEGKFVDEATRLALVNMLLDEE 394

Query: 233 VVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK-NREMICTLAGRMGITFQDQKL 291
            V  I   F    ++G++ +   +       +T ++G  N+     L      T ++  L
Sbjct: 395 RVASIFDHF---PEVGLVFADLSKELY----WTDAIGTLNQNQAAKLDNECQKTIKNS-L 446

Query: 292 DFFAGTMFWVRTEALDPI 309
             F G+M W+  + L+ I
Sbjct: 447 HVFQGSM-WLSKDFLEKI 463


>gi|228477260|ref|ZP_04061898.1| rhamnosyltransferase [Streptococcus salivarius SK126]
 gi|228251279|gb|EEK10450.1| rhamnosyltransferase [Streptococcus salivarius SK126]
          Length = 547

 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 86/226 (38%), Gaps = 26/226 (11%)

Query: 91  IHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYIDLWIEIANLLSNLSISFDLHVTL 150
            +H P  L   +   +G       K +  +V+H++  DL  E   +  +  +S   + TL
Sbjct: 257 RYHSPDSLVISDEKIIGPSFITLSKHEYRMVIHVHISDL--ERLKVFFDSKLSAFYYFTL 314

Query: 151 VT--ESASIKSEILKIFPAARIHIM----ENHGRDVLPFLILLETEQLSNYDYVCKIHGK 204
            +  +   +++ +L  F   R  ++    ENH       + L     LS YD+V   H  
Sbjct: 315 SSHLDKNKVENTLLNSFDKDRFQLVSKTFENH---YHALVFLAS--HLSEYDFVGHFHT- 368

Query: 205 KSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDY 264
             +  G      D   R    ++L     V  I   F    ++G++ +   +       +
Sbjct: 369 --EAFGNEGKLVDEDTRHALVNMLSDEEKVVSIFDHF---PEVGLVFADLSKELY----W 419

Query: 265 TCSLGK-NREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPI 309
           T ++G  N+E    LA        +  L  F G M W+  + L+ I
Sbjct: 420 TDAIGTLNQEQTVKLANEC-RKVINHSLHVFQGFM-WLTKDFLENI 463


>gi|156740479|ref|YP_001430608.1| glycosyl transferase family protein [Roseiflexus castenholzii DSM
           13941]
 gi|156231807|gb|ABU56590.1| glycosyl transferase family 2 [Roseiflexus castenholzii DSM 13941]
          Length = 303

 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 66/224 (29%), Gaps = 57/224 (25%)

Query: 143 SFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVLPFL-------ILLETEQLSNY 195
           SFDL V     S      +   FP  ++ ++EN        L       + L       Y
Sbjct: 35  SFDLLVIDNASSDGTPEVVRARFP--QVKVIEN-----GANLGFAAGNNVGLRYALRHGY 87

Query: 196 DYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAY 255
           DY                         L  D   AP  + ++I   ++   IG +G    
Sbjct: 88  DYAL----------------------LLNNDTEVAPDFLARLIDAAESDPKIGAVGPTIT 125

Query: 256 RYPNKYCDY----TCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALD--PI 309
            Y      +         +   ++       G   +   +DF  G    V+   L+   +
Sbjct: 126 YYERPDLIWSAGGMIDWKRGIAVMRANEVDSGQYHEPADVDFVTGCALLVKRAVLERAGL 185

Query: 310 KNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVD 353
            + R   YFE                  + + +++A FRI  V 
Sbjct: 186 LDERFFMYFEETE---------------WCVRIRRAGFRILHVP 214


>gi|322510485|gb|ADX05799.1| putative N-acetyl glucosaminyl transferase [Organic Lake
           phycodnavirus 1]
          Length = 690

 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 34/94 (36%), Gaps = 23/94 (24%)

Query: 121 VVHLY--------YIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHI 172
            +H Y        Y D   +++         F + VT        K+E + +        
Sbjct: 314 HLHCYDISQFTTIYKDYIYDLSKY-------FHIIVTYTIGYLDKKNEYITLLK------ 360

Query: 173 MENHGRDVLP--FLILLETEQLSNYDYVCKIHGK 204
           + N+G D+     ++    ++  +Y Y+  +H K
Sbjct: 361 IPNNGYDIGAKMMMVKYLKDKNIDYKYIYFMHSK 394


>gi|148658318|ref|YP_001278523.1| glycosyl transferase family protein [Roseiflexus sp. RS-1]
 gi|148570428|gb|ABQ92573.1| glycosyl transferase, family 2 [Roseiflexus sp. RS-1]
          Length = 300

 Score = 40.6 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 64/225 (28%), Gaps = 57/225 (25%)

Query: 143 SFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVLPFL-------ILLETEQLSNY 195
           SFDL V     S      +   FP  ++ ++EN        L       + L       Y
Sbjct: 32  SFDLLVVDNASSDGTPQAVRAQFP--QVTVIEN-----GANLGFAAGNNVGLRYALRHGY 84

Query: 196 DYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAY 255
           DY                         L  D   AP  + ++I    +  DIG  G    
Sbjct: 85  DYAL----------------------LLNNDTEVAPDFLTRLIDVAGSDPDIGAAGPTIT 122

Query: 256 RYPNKYCDY----TCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALD--PI 309
            Y      +              + T     G   +   +DF  G    V+  AL    +
Sbjct: 123 YYERPDLIWSAGGMIDWRHGIARMRTNEVDSGQYCEPADVDFVTGCALLVKRAALQRAGL 182

Query: 310 KNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDC 354
            + R   YFE                  + + +++A FRI  V  
Sbjct: 183 LDERFFMYFEETE---------------WCVRIRRAGFRIVHVPQ 212


>gi|312863645|ref|ZP_07723883.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
 gi|311101181|gb|EFQ59386.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
          Length = 262

 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 76/202 (37%), Gaps = 36/202 (17%)

Query: 119 AIVVHLYYIDLWIEIANLLSNLSISFDLHVTLVT--ESASIKSEILKIFPAARIHIME-- 174
           AI VH+   DL  E   +  +  +S   + TL    +   +++ +L  F   R  I+   
Sbjct: 2   AIHVHI--SDL--ERLKVFFDSKLSAFYYFTLSGHLDKNQVENNLLNSFDKDRFQIVSQK 57

Query: 175 --NHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEG----DLWRRWLFYDLL 228
             NH       + L    QLS YD++   H            EG    +  R  L   LL
Sbjct: 58  FDNH---YHALVSLAS--QLSEYDFIGHFHT------ADFGNEGKLVDEATRLALIDMLL 106

Query: 229 GAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGK-NREMICTLAGRMGITFQ 287
                V  I   F    ++G++ +   +       +T ++G  N+     L      T +
Sbjct: 107 -DEKKVSSIFADF---PEVGLVFADLSKELY----WTDAIGTLNQNQAAKLDNECQKTIK 158

Query: 288 DQKLDFFAGTMFWVRTEALDPI 309
           +  L  F G+M W+  + L+ I
Sbjct: 159 NS-LHVFQGSM-WLSKDFLEKI 178


>gi|168216438|ref|ZP_02642063.1| putative glycosyl transferase [Clostridium perfringens NCTC 8239]
 gi|182381532|gb|EDT79011.1| putative glycosyl transferase [Clostridium perfringens NCTC 8239]
          Length = 289

 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 46/139 (33%), Gaps = 29/139 (20%)

Query: 226 DLLGAPGVVFKIIRTFDTHRDIGMIGSRA---------------YRYPNKYCDYTCSLGK 270
           D+L     +  +I   + +   GMI                    +Y +        L K
Sbjct: 92  DVLIEEKCIINLINELNKNSTFGMITGTMLNSNKEISKGLAWKLPKYKDDIITSFIVLNK 151

Query: 271 NREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEI 330
             + +     ++ +     ++D   G+ F  + EAL  ++       F  +         
Sbjct: 152 IFKPLEYNNKKL-LNNTLNEVDVIPGSFFIAKAEALKKVR-------FFDED------TF 197

Query: 331 EHAVERCFSLSVKKANFRI 349
            +  ER  S  +KK N++I
Sbjct: 198 LYCEERILSYKMKKMNYKI 216


>gi|109521889|ref|YP_655326.1| gp49 [Mycobacterium phage Pipefish]
 gi|88910620|gb|ABD58546.1| gp49 [Mycobacterium phage Pipefish]
          Length = 354

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 32/91 (35%), Gaps = 22/91 (24%)

Query: 222 WLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGR 281
            +    +G    V +++R             RA  +P  Y  +     KN   +  LA R
Sbjct: 107 HMSDMWIGPAAWVGEVLRA----------EGRALHFPTAYDRFALPF-KNETGVRELARR 155

Query: 282 MGITFQDQKLDFFAGT-----------MFWV 301
           +G T QD  + F AGT           M W 
Sbjct: 156 VGQTVQDNGVKFPAGTPWVGTAFSQGSMIWC 186


>gi|229112680|ref|ZP_04242216.1| Glycosytransferase [Bacillus cereus Rock1-15]
 gi|228670812|gb|EEL26120.1| Glycosytransferase [Bacillus cereus Rock1-15]
          Length = 355

 Score = 37.9 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 8/66 (12%)

Query: 115 KAKIAIVVH-----LYYIDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAAR 169
           K K+ + +H     ++Y +   +I N +  +    D+ +TL   S   K +I  I     
Sbjct: 99  KKKVVLHIHGAEFMVFYQESSEDIRNQIREILNQVDVIITL---SQKWKEDIESITNNRN 155

Query: 170 IHIMEN 175
           + ++ N
Sbjct: 156 VKVIYN 161


>gi|222435717|ref|YP_002564145.1| gp47 [Mycobacterium phage Phlyer]
 gi|222088270|gb|ACM42211.1| gp47 [Mycobacterium phage Phlyer]
          Length = 354

 Score = 37.9 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 32/91 (35%), Gaps = 22/91 (24%)

Query: 222 WLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGR 281
            +    +G    V +++R             RA  +P  Y  +     KN   +  LA R
Sbjct: 107 HMSDMWIGPAAWVGEVLRA----------EGRALHFPTAYDRFALPF-KNETGVRELARR 155

Query: 282 MGITFQDQKLDFFAGT-----------MFWV 301
           +G T QD  + F AGT           M W 
Sbjct: 156 VGQTVQDNGVKFPAGTPWVGTAFSQGSMIWC 186


>gi|194303242|ref|YP_002014656.1| gp45 [Mycobacterium phage Phaedrus]
 gi|194150974|gb|ACF34009.1| gp45 [Mycobacterium phage Phaedrus]
          Length = 354

 Score = 37.9 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 32/91 (35%), Gaps = 22/91 (24%)

Query: 222 WLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGR 281
            +    +G    V +++R             RA  +P  Y  +     KN   +  LA R
Sbjct: 107 HMSDMWIGPAAWVGEVLRA----------EGRALHFPTAYDRFALPF-KNETGVRELARR 155

Query: 282 MGITFQDQKLDFFAGT-----------MFWV 301
           +G T QD  + F AGT           M W 
Sbjct: 156 VGQTVQDNGVKFPAGTPWVGTAFSQGSMIWC 186


>gi|326784138|ref|YP_004324531.1| hypothetical protein Syn1_160 [Prochlorococcus phage Syn1]
 gi|310004870|gb|ADO99261.1| hypothetical protein Syn1_160 [Prochlorococcus phage Syn1]
          Length = 398

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 18/110 (16%)

Query: 36  GGFFFWFWTLFYKRSKKLCYDENYV---------------VAYGSRSGKKFFAQSNLYMM 80
           G FF    ++F K   K+CY E  +               + Y S+ G K   Q +L   
Sbjct: 67  GRFFVGTKSVFNKTEPKICYSEKAIDKLYEGDLAEKLKFALRYFSQLGIKGVIQGDLMFT 126

Query: 81  EREL---HFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLYYI 127
           +  L     DG+R+H F      +  P    + + A  AKI +V H +Y 
Sbjct: 127 DSTLKTETVDGERLHTFRPNTITYAIPVDHPIGKAAGAAKIGVVFHTHYT 176


>gi|328948788|ref|YP_004366125.1| 1-deoxy-D-xylulose-5-phosphate synthase [Treponema succinifaciens
           DSM 2489]
 gi|328449112|gb|AEB14828.1| 1-deoxy-D-xylulose-5-phosphate synthase [Treponema succinifaciens
           DSM 2489]
          Length = 589

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLW 219
           EN G D+   + L E  +  ++  V  IH  K K    +    + W
Sbjct: 215 EN-GNDIGAMIALFEKVKDIDHPVVLHIHTLKGKGYAPAEKNKEAW 259


>gi|153811516|ref|ZP_01964184.1| hypothetical protein RUMOBE_01908 [Ruminococcus obeum ATCC 29174]
 gi|149832257|gb|EDM87342.1| hypothetical protein RUMOBE_01908 [Ruminococcus obeum ATCC 29174]
          Length = 589

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLW 219
           EN G D+   + L    + +++  V  IH +K K    +  + + W
Sbjct: 219 EN-GNDIASLISLFRKVKDTDHPIVVHIHTQKGKGYEIAEKDKEGW 263


>gi|153814764|ref|ZP_01967432.1| hypothetical protein RUMTOR_00979 [Ruminococcus torques ATCC 27756]
 gi|145847795|gb|EDK24713.1| hypothetical protein RUMTOR_00979 [Ruminococcus torques ATCC 27756]
          Length = 589

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 174 ENHGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLW 219
           EN G D+   + L    + +++  V  IH +K K    +  + + W
Sbjct: 219 EN-GNDIASLISLFRKVKDTDHPIVVHIHTQKGKGYEIAEKDKEGW 263


>gi|146341712|ref|YP_001206760.1| glycosyl transferase family protein [Bradyrhizobium sp. ORS278]
 gi|146194518|emb|CAL78543.1| putative glycosyltransferase (family 2) [Bradyrhizobium sp. ORS278]
          Length = 316

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%)

Query: 151 VTESASIKSEILKIFPAARIHIMENHG-RDVLP-----FLILLETEQLSNYDYVCKI 201
             E+ +I  E  +  P  R+    + G R V P     F   LET +L ++DYVCK+
Sbjct: 45  TDETPAILDEYARRLPYLRVVRRADRGGRKVGPGVIEAFYAGLETVRLEDFDYVCKL 101


>gi|297569722|ref|YP_003691066.1| glycosyl transferase family 2 [Desulfurivibrio alkaliphilus AHT2]
 gi|296925637|gb|ADH86447.1| glycosyl transferase family 2 [Desulfurivibrio alkaliphilus AHT2]
          Length = 318

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 128 DLWIEIANLLSNLSISFDLHVTL----VTESASIKSEILKIFPAARIHIMENHG-RDVLP 182
           D      + +   ++  DL V +      ++  I +E    +   +I    N G R V P
Sbjct: 17  DYMRHTLDSMVAQTVRPDLWVIVDDGSTDQTPQILAEYAAKYDFIKIVPKANRGHRSVGP 76

Query: 183 -----FLILLETEQLSNYDYVCKI 201
                F       +  +++Y+CK+
Sbjct: 77  GVIEAFYAGYRAVRPDDFEYICKL 100


>gi|261338088|ref|ZP_05965972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bifidobacterium gallicum
           DSM 20093]
 gi|270276707|gb|EFA22561.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bifidobacterium gallicum
           DSM 20093]
          Length = 639

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 24/147 (16%)

Query: 176 HGRDVLPFLILLETEQLSNYDYVCKIHGKKSKRKG-----YSWWEG----DLWRRWLFYD 226
           HG DV   +  L   + +++  V  IH  K          Y   EG    + W+  L   
Sbjct: 218 HGNDVHAMIQALREVKDTDHPVVLHIHTCKGLGLDQQDAHYGVLEGRCEANHWQNPLAQA 277

Query: 227 L--LGAPGVVFKII-----RTFDTHRDIGMIGSRAY-------RYPNKYCDYTCSLGKNR 272
              LG+     + I     + FD    + +I             +  +   +    G   
Sbjct: 278 NAPLGSRKTYGRAIMAMLEQRFDEEPGLMVISPATPGSNGITREFRERAGAHYIDTGITE 337

Query: 273 EMICTLAGRMGITFQDQKLDFFAGTMF 299
           E   T A  +G     + +   + T F
Sbjct: 338 EHAVTFASGVG-KAGGRPVVATSATFF 363


>gi|282600847|ref|ZP_05979893.2| conserved hypothetical protein [Subdoligranulum variabile DSM
           15176]
 gi|282571128|gb|EFB76663.1| conserved hypothetical protein [Subdoligranulum variabile DSM
           15176]
          Length = 475

 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 38/129 (29%), Gaps = 25/129 (19%)

Query: 230 APGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQ 289
           A G + +    F     +G++      +P            +R ++     ++ +   + 
Sbjct: 331 AEGRLAEAASLFAEKPLLGVLSPALPLWPKALQTVKSRWHADRSLLD---KKLSVPLGND 387

Query: 290 KLDFF-AGTMFWV--RTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKAN 346
                 AG   W   R++A              P V + +D            L  ++  
Sbjct: 388 PPPAPHAG---WALVRSDAF---------PQGVPIVEQEID-CW------LLPLIAQQNG 428

Query: 347 FRISDVDCI 355
           +  +  + +
Sbjct: 429 YYSATFESV 437


>gi|256784290|ref|ZP_05522721.1| transferase [Streptomyces lividans TK24]
 gi|289768176|ref|ZP_06527554.1| transferase [Streptomyces lividans TK24]
 gi|289698375|gb|EFD65804.1| transferase [Streptomyces lividans TK24]
          Length = 314

 Score = 36.4 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 30/134 (22%)

Query: 137 LSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIME-NHGRDVLPFLILLETEQLSNY 195
           L  L    D+ V     +   ++ + + FP  R+  +  N G                  
Sbjct: 46  LLALPERPDVLVVDNASTDDTRAMLARDFPQVRVLPLPYNRG------------------ 87

Query: 196 DYVCKIHGKKSKRKGY-SWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRA 254
             + + HG ++    Y ++ + D W          APG +    R FD H  +G++ +R 
Sbjct: 88  -ALARTHGVRALDTPYVAFSDDDSW---------WAPGALGAAARHFDDHPRLGLLSART 137

Query: 255 YRYPNKYCDYTCSL 268
              P    D    L
Sbjct: 138 LVGPGDAADPLNDL 151


>gi|153007604|ref|YP_001368819.1| glycosyl transferase family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151559492|gb|ABS12990.1| glycosyl transferase family 2 [Ochrobactrum anthropi ATCC 49188]
          Length = 658

 Score = 36.4 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 7/61 (11%)

Query: 199 CKIHGKKSKRKGYSWWEGDLWRR-------WLFYDLLGAPGVVFKIIRTFDTHRDIGMIG 251
              H K+ K  G+     DL++R        L  D +   G   +++  F++   IG+  
Sbjct: 60  LFHHIKREKNLGFLGNVNDLFKRATGDVVVLLNSDTILPAGWAERVLAAFESDPTIGLAC 119

Query: 252 S 252
            
Sbjct: 120 P 120


>gi|21224513|ref|NP_630292.1| transferase [Streptomyces coelicolor A3(2)]
 gi|4455734|emb|CAB36597.1| putative transferase [Streptomyces coelicolor A3(2)]
          Length = 317

 Score = 36.4 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 30/134 (22%)

Query: 137 LSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIME-NHGRDVLPFLILLETEQLSNY 195
           L  L    D+ V     +   ++ + + FP  R+  +  N G                  
Sbjct: 46  LLALPERPDVLVVDNASTDDTRAMLARDFPQVRVLPLPYNRG------------------ 87

Query: 196 DYVCKIHGKKSKRKGY-SWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRA 254
             + + HG ++    Y ++ + D W          APG +    R FD H  +G++ +R 
Sbjct: 88  -ALARTHGVRALDTPYVAFSDDDSW---------WAPGALGAAARHFDDHPRLGLLSART 137

Query: 255 YRYPNKYCDYTCSL 268
              P    D    L
Sbjct: 138 LVGPGDAADPLNDL 151


>gi|289742609|gb|ADD20052.1| beta-1,6-N-acetylglucosaminyltransferase [Glossina morsitans
           morsitans]
          Length = 311

 Score = 36.0 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 14/135 (10%)

Query: 8   KGYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWTLFYKRSKKLCYDENYVVAYGSRS 67
           K Y L  + F + N  ++   + K + WG      W LF K    +   E  ++A  +R 
Sbjct: 130 KDYGLLKTGFPAENVCNNSVLLVKTHEWGPKA---WALFSKALLLVRDPEKAILAEFNRQ 186

Query: 68  --GKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGWESPAMGKVMQIAIKAKIAIVVHLY 125
             G   FA  + Y   R  ++           LHGWE   +          KI     ++
Sbjct: 187 SGGHVGFASPDRYKRTRGKYWQQ----FVANKLHGWELMNLNWARNFTGNIKI-----IF 237

Query: 126 YIDLWIEIANLLSNL 140
           Y DL  ++  +L N+
Sbjct: 238 YEDLVNKLEPVLRNI 252


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.151    0.476 

Lambda     K      H
   0.267   0.0464    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,184,896,618
Number of Sequences: 14124377
Number of extensions: 305538913
Number of successful extensions: 948982
Number of sequences better than 10.0: 244
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 947188
Number of HSP's gapped (non-prelim): 569
length of query: 365
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 225
effective length of database: 2,865,380,850
effective search space: 644710691250
effective search space used: 644710691250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.8 bits)
S2: 82 (36.0 bits)