HHsearch alignment for GI: 254780924 and conserved domain: COG2855
>COG2855 Predicted membrane protein [Function unknown].
Probab=96.17 E-value=0.084 Score=29.23 Aligned_cols=99 Identities=17% Similarity=0.112 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74110024666664222027614-56899999766899999999886531147988620256777765554221223211
Q gi|254780924|r 252 KLFGVSLSLGAFFAGMILAESEL-SQSAAQESLPLRDAFSVLFFISVGMMFNPDILISNPILLMMAVIIVIIGKALIAFI 330 (609)
Q Consensus 252 ~~~g~s~~lgaf~aG~~l~~~~~-~~~~~~~~~~~~~~~~~~fFv~iG~~l~~~~l~~~~~~~l~~~~~~~~~k~~~~~~ 330 (609)
T Consensus 33 ~~~~l~al~lAIllGi~l~~l~~~~~~~~~GI~fs~k~LLr~gIvLlG~~ltl~~i~~~G~~~v~~~~~~l~~t~~~~~~ 112 (334)
T COG2855 33 IHLGLSALTLAILLGILLGILPQIPAQTSAGITFSSKKLLRLGIVLLGFRLTLSDIADVGGSGVLIIAITLSSTFLFAYF 112 (334)
T ss_pred HHCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 52585178999999999850023403525620013887999999998360139999872711799999999999999999
Q ss_pred HHCCCCCCHHHHHHHHHHHC
Q ss_conf 00025587999999864321
Q gi|254780924|r 331 VVIAFGRSVATALTIAASLS 350 (609)
Q Consensus 331 ~~~~~~~~~~~~~~~g~~l~ 350 (609)
T Consensus 113 lg~~lgld~~~a~Lia~Gss 132 (334)
T COG2855 113 LGKLLGLDKKLALLIAAGSS 132 (334)
T ss_pred HHHHHCCCHHHHHHHHHCCH
T ss_conf 99995998878999980211