HHsearch alignment for GI: 254780924 and conserved domain: COG3004

>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism].
Probab=97.61  E-value=0.0043  Score=38.13  Aligned_cols=224  Identities=14%  Similarity=0.111  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHCCCHHHHHHH---C-CHHH--HHHHHHHHHHHHHHHHHHH-----HHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999882541688999841---5-1588--9989999999999999999-----9678868999999999742389999
Q gi|254780924|r   58 IILLMFGVGLHFSVKDLISV---R-GIAL--PGALIQIILGTALGALMGM-----VMGWSLGGSVVFGLALSIASTVVLL  126 (609)
Q Consensus        58 l~~llF~~Gleld~~~l~~~---~-~~~~--~~~~~~~~~~~~~~~~~~~-----~lg~~~~~all~g~~l~~ts~~vv~  126 (609)
T Consensus        71 MAvFFl~iGLEvKrEll~G~L~s~~~a~~P~iAA~GGmi~PAliy~~~n~~~p~~~~GWaIP~---------ATDiAFAL  141 (390)
T COG3004          71 MAVFFLLIGLEVKRELLEGQLSSWRNAAFPVIAAIGGMIAPALIYLALNAGDPATLEGWAIPM---------ATDIAFAL  141 (390)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHEEECCCHHHHCCCCCCC---------HHHHHHHH
T ss_conf             999999999999999971600370454557899861641555664103259846624767650---------78899999


Q ss_pred             HHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             876565-5411440578989987777899999999998613444330135678999988765321014799999998410
Q gi|254780924|r  127 KALQEN-RILETDRGKIAVGWLIVEDLIIVLALVLIPAAATNYSAEPSSMTHPWTSFITQQMGFEVGMPGLIMITLLKVV  205 (609)
Q Consensus       127 ~~l~~~-~~~~~~~g~~~~~~~~~~Di~~i~~l~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (609)
T Consensus       142 GvlaLLG~rVP~sLKiFLlaLAI~DDLGAIvIIAlF---Yt~~L-s~~a--------------------------l~~a~  191 (390)
T COG3004         142 GVLALLGSRVPLSLKIFLLALAIIDDLGAIVIIALF---YTTDL-SMAA--------------------------LGIAA  191 (390)
T ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE---ECCCC-CHHH--------------------------HHHHH
T ss_conf             999995377970599999999998315512798640---07886-6999--------------------------99999


Q ss_pred             CCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHH
Q ss_conf             100001000344543877642035673689999999999999988874110024666664222027-----614568999
Q gi|254780924|r  206 AFIGVMLIFGRRVIPWILHMIFYTGSRELFRLGVLAIALGFAYGSSKLFGVSLSLGAFFAGMILAE-----SELSQSAAQ  280 (609)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~s~~lgaf~aG~~l~~-----~~~~~~~~~  280 (609)
T Consensus       192 ~~i~vL~~lN~~--------~i~~l~~Y--~~~gviL-----W~~vlkSGVHATLAGVi~~f~IPl~~k~~~spl~~leh  256 (390)
T COG3004         192 LAIAVLAVLNRL--------GVRRLSPY--LLVGVIL-----WIAVLKSGVHATLAGVILAFFIPLKTKEGESPLERLEH  256 (390)
T ss_pred             HHHHHHHHHHHH--------CCHHHHHH--HHHHHHH-----HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHH
T ss_conf             999999999883--------65011299--9999999-----99999722079999889970653147778895899998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             997668999999998865311479886---2025677776555422122321100025
Q gi|254780924|r  281 ESLPLRDAFSVLFFISVGMMFNPDILI---SNPILLMMAVIIVIIGKALIAFIVVIAF  335 (609)
Q Consensus       281 ~~~~~~~~~~~~fFv~iG~~l~~~~l~---~~~~~~l~~~~~~~~~k~~~~~~~~~~~  335 (609)
T Consensus       257 ~L~pwvaf~IlPlFaFaNAGvsl~g~~~~~l~s~l~lgI~lGL~~GKplGIf~fs~lA  314 (390)
T COG3004         257 ALHPWVAFFILPLFAFANAGVSLQGVSLSGLTSPLTLGIILGLFLGKPLGIFLFSWLA  314 (390)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             7531288999999987257863025554221111499999999835722103338999