HHsearch alignment for GI: 254780924 and conserved domain: COG3263

>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism].
Probab=99.96  E-value=1.2e-25  Score=193.59  Aligned_cols=373  Identities=14%  Similarity=0.236  Sum_probs=264.3

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCCC--HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHH
Q ss_conf             9999999999998708886799999999627410385584--78999999999999998825416889998415158899
Q gi|254780924|r    7 GFVLAFIFGAIANRCRLPTLIGYLVAGILVGPRTPGFVAS--QSLVPALAEIGIILLMFGVGLHFSVKDLISVRGIALPG   84 (609)
Q Consensus         7 ~l~~a~i~g~la~rl~lP~i~~~il~GillGp~~l~~i~~--~~~l~~l~~lgl~~llF~~Gleld~~~l~~~~~~~~~~   84 (609)
T Consensus        15 lvivsif~s~~ssrfGvP~LllFl~iGm~aG~dGlg~I~fdNy~~Ay~vg~lALaiILfdgG~~T~lss~r~a~~palsL   94 (574)
T COG3263          15 LVIVSIFSSLISSRFGVPLLLLFLSIGMLAGVDGLGGIEFDNYPFAYMVGNLALAIILFDGGFGTQLSSFRVAAGPALSL   94 (574)
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf             99999999999987274699999998887077750313116638999998888888741376677188889775125678


Q ss_pred             HHHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8999999999-999999996788689999999997423899998765655411440578989987777899999999998
Q gi|254780924|r   85 ALIQIILGTA-LGALMGMVMGWSLGGSVVFGLALSIASTVVLLKALQENRILETDRGKIAVGWLIVEDLIIVLALVLIPA  163 (609)
Q Consensus        85 ~~~~~~~~~~-~~~~~~~~lg~~~~~all~g~~l~~ts~~vv~~~l~~~~~~~~~~g~~~~~~~~~~Di~~i~~l~il~~  163 (609)
T Consensus        95 ATlGVl~Ts~Ltg~aA~~ll~l~wle~~LiGAiVgSTDAAAVF~lL~~~nl~erv~stLEiESGtNDPmAvfLTitliel  174 (574)
T COG3263          95 ATLGVLITSGLTGVAAAYLLNLDWLEGLLIGAIVGSTDAAAVFSLLGGKNLNERVASTLEIESGSNDPMAVFLTITLIEL  174 (574)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHEEEECCCCCCEEEEEHHHHHHH
T ss_conf             88889999889999999980638999888877654640899999973587667644437740378986155105899999


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             61344433013567899998876532101479999999841010000100034454387764203567368999999999
Q gi|254780924|r  164 AATNYSAEPSSMTHPWTSFITQQMGFEVGMPGLIMITLLKVVAFIGVMLIFGRRVIPWILHMIFYTGSRELFRLGVLAIA  243 (609)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  243 (609)
T Consensus       175 i~~get~l~~~----------------------~ll~f~~q~glG~l~G~~gg~l~~~~Inr~n--Ld~GL~pil~la~~  230 (574)
T COG3263         175 IAGGETNLSWG----------------------FLLGFLQQFGLGLLLGLGGGKLLLQLINRIN--LDSGLYPILALAGG  230 (574)
T ss_pred             HHCCCCCCCHH----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHH
T ss_conf             96366667788----------------------9999999970899998878999999986514--66512689999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHH
Q ss_conf             9999988874110024666664222027614--568999997668999999998865311479886202-5677776555
Q gi|254780924|r  244 LGFAYGSSKLFGVSLSLGAFFAGMILAESEL--SQSAAQESLPLRDAFSVLFFISVGMMFNPDILISNP-ILLMMAVIIV  320 (609)
Q Consensus       244 ~~~~~~~~~~~g~s~~lgaf~aG~~l~~~~~--~~~~~~~~~~~~~~~~~~fFv~iG~~l~~~~l~~~~-~~~l~~~~~~  320 (609)
T Consensus       231 Ll~-fs~t~aiGGsG~LaVYl~Gll~GN~~i~~r~~I~~f~dG~twlaQI~MFlvLGLLvtPsql~~iavPailL~l~mi  309 (574)
T COG3263         231 LLI-FSLTGAIGGSGILAVYLAGLLLGNRPIRARHGILRFFDGLAWLAQILMFLVLGLLVTPSQLLPIAIPAILLSLWMI  309 (574)
T ss_pred             HHH-HHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf             999-9998771676227999988974787513778889873108999999999999986596550676689999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             422122321100025587999999864321220256788988764178786687-7877888999999999998678999
Q gi|254780924|r  321 IIGKALIAFIVVIAFGRSVATALTIAASLSQIGEFSFILANLGVELGILPDQAR-DLILASSIISIILNPLVFVLAEFLQ  399 (609)
Q Consensus       321 ~~~k~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~v~a~~a~~~g~i~~~~~-~~i~~~~~~s~~itp~l~~~~~~l~  399 (609)
T Consensus       310 fvaRP~aV~l~l~Pfrf~~~Ek~fvSWvGL-RGAv~IilAifpm~aglena~l~FNvAF~VVLvSlliQ-------G~tl  381 (574)
T COG3263         310 FVARPLAVFLGLIPFRFNRREKLFVSWVGL-RGAVPIILAIFPMMAGLENARLFFNVAFFVVLVSLLIQ-------GSTL  381 (574)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCHHHHEHHHC-CCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHC-------CCCC
T ss_conf             988689898710553557420231011311-55324567665775688565178642489999999981-------5751


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999875432100
Q gi|254780924|r  400 SFLVLRFARVTSS  412 (609)
Q Consensus       400 ~~~~~~~~~~~~~  412 (609)
T Consensus       382 ~~~a~~l~~i~p~  394 (574)
T COG3263         382 PWAAKKLKVIVPP  394 (574)
T ss_pred             HHHHHHCCCCCCC
T ss_conf             4788744533589