HHsearch alignment for GI: 254780924 and conserved domain: PRK08223

Probab=95.83  E-value=0.067  Score=29.92  Aligned_cols=99  Identities=17%  Similarity=0.150  Sum_probs=54.2

Q ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHCCC-CEEEECCCHHHHHHHHHCCCCEEECCCCCHHHHHHCCHHHCCEEEEECC
Q ss_conf             321347817997377489999999984799-0899719989999999769929997899989998489314679999359
Q gi|254780924|r  443 QKTDLCDHVILVGYGRIGKVIVQNLKAAGI-ALLVIEDSEKKIEELRSLGIDVIYGNATITKILLMANIEKARSLVVSIS  521 (609)
Q Consensus       443 ~~~~~~~~vii~G~g~~g~~~~~~L~~~~~-~v~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~  521 (609)
T Consensus        22 Q~kL~~s~VlVvG~GGlGs~~a~~LAraGVG~i~lvD~D~velSNLnRQi~---~~-------~~diG~-----------   80 (287)
T PRK08223         22 QQRLRNSRVAIAGLGGVGGVHLLTLARLGIGKFNIADFDVFELVNSNRQYG---AM-------MSSNGR-----------   80 (287)
T ss_pred             HHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHC---CC-------HHHCCC-----------
T ss_conf             999855968999367557999999998289759997499846344022234---47-------434498-----------


Q ss_pred             CHHHHHHHHHHHHHHCCCCEEEEEE--CCHHHHHHHHHCCCCEEEC
Q ss_conf             9689999999999958988089994--6989999999769987876
Q gi|254780924|r  522 TAFEAAYITQEARNSNPSILIIALA--DSDSEVEHLTRYGADTVVM  565 (609)
Q Consensus       522 ~~~~n~~~~~~~~~~~~~~~iia~~--~~~~~~~~l~~~Ga~~vi~  565 (609)
T Consensus        81 --~Kveva~e~l~~INP~v~V~~~~~~lt~~N~~~~l~-~~DvVvD  123 (287)
T PRK08223         81 --PKVEVMREIALDINPELEIRAFPEGIGKENLDTFLD-GVDVYVD  123 (287)
T ss_pred             --CHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH-CCCEEEE
T ss_conf             --589999999998698987999587899899999986-7999997