HHsearch alignment for GI: 254780924 and conserved domain: PRK09186
>PRK09186 flagellin modification protein A; Provisional.
Probab=95.61 E-value=0.14 Score=27.64 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=50.2
Q ss_pred EEEE-CCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHC-----CC--CEEECCCCCHHHHHHC------CHHHCCEE
Q ss_conf 7997-377489999999984799089971998999999976-----99--2999789998999848------93146799
Q gi|254780924|r 451 VILV-GYGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSL-----GI--DVIYGNATITKILLMA------NIEKARSL 516 (609)
Q Consensus 451 vii~-G~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~-----g~--~~~~gd~~~~~~l~~~------~i~~a~~v 516 (609)
T Consensus 7 ~lVTGgs~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~Dvt~~~~v~~~~~~~~~~~g~id~l 86 (255)
T PRK09186 7 ILITGAGGLIGSALVKAILEAGGIVIAADINKEALNKLLESLGTIEKTKLTLVELDITDQESLEEFLSKSQERYGKIDGA 86 (255)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99979586899999999998799999996988999999999987059807999846899999999999999981997789
Q ss_pred EEE
Q ss_conf 993
Q gi|254780924|r 517 VVS 519 (609)
Q Consensus 517 i~~ 519 (609)
T Consensus 87 Vnn 89 (255)
T PRK09186 87 VNC 89 (255)
T ss_pred EEC
T ss_conf 975