HHsearch alignment for GI: 254780924 and conserved domain: PRK09496
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed.
Probab=99.95 E-value=6.5e-27 Score=202.36 Aligned_cols=161 Identities=19% Similarity=0.248 Sum_probs=145.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHC--CCCEEECCCCCHHHHHHCCHHHCCEEEEECCCHH
Q ss_conf 47817997377489999999984799089971998999999976--9929997899989998489314679999359968
Q gi|254780924|r 447 LCDHVILVGYGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSL--GIDVIYGNATITKILLMANIEKARSLVVSISTAF 524 (609)
Q Consensus 447 ~~~~vii~G~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~--g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~~ 524 (609)
T Consensus 231 ~~~~v~I~Ggg~ig~~la~~L~-~~~~v~iIe~d~~~~~~la~~l~~~~Vi~GD~td~~~L~e~gi~~aD~~ia~T~~De 309 (455)
T PRK09496 231 PVKRIMIAGGGNIGLYLAKLLE-KGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTNDDE 309 (455)
T ss_pred CCCEEEEECCCHHHHHHHHHHH-CCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCEEEEECCCHH
T ss_conf 6651899878699999999874-088389970898999999974785399978876889997636455648999038818
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCC
Q ss_conf 99999999999589880899946989999999769987876589999999999874210026---787877888730389
Q gi|254780924|r 525 EAAYITQEARNSNPSILIIALADSDSEVEHLTRYGADTVVMSAREIALGMLDRLNQVHHEKV---TCDRSNKDEIDSKDD 601 (609)
Q Consensus 525 ~n~~~~~~~~~~~~~~~iia~~~~~~~~~~l~~~Ga~~vi~p~~~~a~~~~~~l~~~~~~~~---~~~~~~~~e~~~~~~ 601 (609)
T Consensus 310 ~Ni~~~llAk~~g~~-~~ia~v~~~~y~~l~~~lgid~~isp~~~~a~~I~~~i~~~~v~~~~~l~~~~~evie~~v~~~ 388 (455)
T PRK09496 310 ANILSSLLAKRLGAK-KVIALINRSAYVDLVQGLGIDIAISPRQATISAILRHVRRGDIVAVHSLRRGAAEAIEAVAHET 388 (455)
T ss_pred HHHHHHHHHHHCCCC-CEEEEECCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCC
T ss_conf 899999999873997-3688844667887653248865788899999999998405684489995599569999997899
Q ss_pred CCCCCCCC
Q ss_conf 60048859
Q gi|254780924|r 602 SSVLSVNL 609 (609)
Q Consensus 602 ~~~~~~~l 609 (609)
T Consensus 389 s~~~gk~i 396 (455)
T PRK09496 389 SKVVGKPL 396 (455)
T ss_pred CCCCCCCH
T ss_conf 93359699