HHsearch alignment for GI: 254780924 and conserved domain: PRK10336

>PRK10336 DNA-binding transcriptional regulator QseB; Provisional.
Probab=95.15  E-value=0.12  Score=28.07  Aligned_cols=93  Identities=17%  Similarity=0.193  Sum_probs=61.4

Q ss_pred             CEEEECCCHHHHHHHH----HCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCCH-HHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             0899719989999999----76992999789998999848931467999935996-899999999999589880899946
Q gi|254780924|r  473 ALLVIEDSEKKIEELR----SLGIDVIYGNATITKILLMANIEKARSLVVSISTA-FEAAYITQEARNSNPSILIIALAD  547 (609)
Q Consensus       473 ~v~vid~~~~~~~~~~----~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~-~~n~~~~~~~~~~~~~~~iia~~~  547 (609)
T Consensus         2 kILlVEDd~~l~~~l~~~L~~~g~~V~~a-~~g~~a~~~~~~~~~DlvilDi~lP~~dG~~l~~~iR~~~~~~PII~lta   80 (219)
T PRK10336          2 RILLIEDDMLIGDGIKTGLSKMGFSVDWF-TQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLILTA   80 (219)
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEE-CCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEC
T ss_conf             89999389999999999999879999998-99999999986289699999799999985631010465278887899806


Q ss_pred             CHHHHH--HHHHCCCCEEE-CH
Q ss_conf             989999--99976998787-65
Q gi|254780924|r  548 SDSEVE--HLTRYGADTVV-MS  566 (609)
Q Consensus       548 ~~~~~~--~l~~~Ga~~vi-~p  566 (609)
T Consensus        81 ~~~~~d~i~~l~~GAdDYl~KP  102 (219)
T PRK10336         81 RDALAERVEGLRLGADDYLCKP  102 (219)
T ss_pred             CCCHHHHHHHHHCCCCEEEECC
T ss_conf             8999999999976998886889