HHsearch alignment for GI: 254780924 and conserved domain: PRK10537
>PRK10537 voltage-gated potassium channel; Provisional.
Probab=99.97 E-value=2.1e-27 Score=205.72 Aligned_cols=134 Identities=18% Similarity=0.215 Sum_probs=124.8
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCCHHH
Q ss_conf 34781799737748999999998479908997199899999997699299978999899984893146799993599689
Q gi|254780924|r 446 DLCDHVILVGYGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSLGIDVIYGNATITKILLMANIEKARSLVVSISTAFE 525 (609)
Q Consensus 446 ~~~~~vii~G~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~~~ 525 (609)
T Consensus 202 ~~kdH~IICGyG~~g~~v~~eL~~~g~~vVVI~~~~~~~--~~~~~~~~I~GDaTdd~~L~kAgI~~Ak~VI~~~~~Da~ 279 (356)
T PRK10537 202 HRKDHFIICGHSPLAINTYLGLRQRGQAVTVIVPLGEEH--RLPDDADLIPGDSSDSAVLKKAGAARARAILALRDNDAD 279 (356)
T ss_pred HCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHH--CCCCCCCEEECCCCCHHHHHHCCCHHHCEEEECCCCCHH
T ss_conf 419968998988379999999997299979994580443--020568879508997899987593450798880787778
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHH
Q ss_conf 99999999995898808999469899999997699878765899999999998742
Q gi|254780924|r 526 AAYITQEARNSNPSILIIALADSDSEVEHLTRYGADTVVMSAREIALGMLDRLNQV 581 (609)
Q Consensus 526 n~~~~~~~~~~~~~~~iia~~~~~~~~~~l~~~Ga~~vi~p~~~~a~~~~~~l~~~ 581 (609)
T Consensus 280 NvfivLTAR~LnP~v~IVA~a~~~en~~KlrrAGAD~VISP~~lGg~LLA~~l~ge 335 (356)
T PRK10537 280 NAFVVLAAKEMSSDVKTVAAVNDSKNLEKIKRVHPDMIFSPQLLGSELLARTLNGE 335 (356)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCC
T ss_conf 99999849986899769999676757999986289999868887899999984588