HHsearch alignment for GI: 254780924 and conserved domain: PRK12549
>PRK12549 shikimate 5-dehydrogenase; Reviewed.
Probab=94.50 E-value=0.092 Score=28.96 Aligned_cols=125 Identities=15% Similarity=0.190 Sum_probs=68.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-CEEEECCCHHHHHHHHHC-CCCEEECCCCCHHHHHHCCHHHCCEEEEECCCH--
Q ss_conf 7817997377489999999984799-089971998999999976-992999789998999848931467999935996--
Q gi|254780924|r 448 CDHVILVGYGRIGKVIVQNLKAAGI-ALLVIEDSEKKIEELRSL-GIDVIYGNATITKILLMANIEKARSLVVSISTA-- 523 (609)
Q Consensus 448 ~~~vii~G~g~~g~~~~~~L~~~~~-~v~vid~~~~~~~~~~~~-g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~-- 523 (609)
T Consensus 127 ~~~vlilGaGGaa~ai~~al~~~g~~~i~I~nR~~~r~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~d~iINaTp~Gm~ 205 (284)
T PRK12549 127 LERVVQLGAGGAGAAVAHALLTLGVERLTLFDVDPARAQALADELNARFPAARVTAGSDLA-AALAAADGLVHATPTGMA 205 (284)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECHHHH-HHHHHCCEEEECCCCCCC
T ss_conf 5718996566168999999997699989999798899999999998657986376416767-654213826657898877
Q ss_pred -HHHHHHHHHHHHHCCCCEEEEEECCH---HHHHHHHHCCCCEEECHHHHHHHHHHH
Q ss_conf -89999999999958988089994698---999999976998787658999999999
Q gi|254780924|r 524 -FEAAYITQEARNSNPSILIIALADSD---SEVEHLTRYGADTVVMSAREIALGMLD 576 (609)
Q Consensus 524 -~~n~~~~~~~~~~~~~~~iia~~~~~---~~~~~l~~~Ga~~vi~p~~~~a~~~~~ 576 (609)
T Consensus 206 ~~~~~p~--~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~-~i~Gl~MLv~Qa~~ 259 (284)
T PRK12549 206 KHPGLPL--PAELLRPGLWVADIVYFPLETELLRAARALGCR-TLDGGGMAVFQAVD 259 (284)
T ss_pred CCCCCCC--CHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCE-EECCHHHHHHHHHH
T ss_conf 8999999--988918787567612077457999999988590-77839999999999