HHsearch alignment for GI: 254780924 and conserved domain: PRK12771

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional.
Probab=95.72  E-value=0.088  Score=29.12  Aligned_cols=82  Identities=12%  Similarity=0.246  Sum_probs=56.3

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCC-CEEEE--------CCCHHHHHHHHHCCCCEEECCCCCHHHHHH---------
Q ss_conf             347817997377489999999984799-08997--------199899999997699299978999899984---------
Q gi|254780924|r  446 DLCDHVILVGYGRIGKVIVQNLKAAGI-ALLVI--------EDSEKKIEELRSLGIDVIYGNATITKILLM---------  507 (609)
Q Consensus       446 ~~~~~vii~G~g~~g~~~~~~L~~~~~-~v~vi--------d~~~~~~~~~~~~g~~~~~gd~~~~~~l~~---------  507 (609)
T Consensus       265 ~~Gk~VvVIGGGntAmD~artA~RlGa~~V~ivyrr~~~~MpA~~~Ei~~A~eEGV~~~~~~~p~~-i~~~~g~v~gl~~  343 (560)
T PRK12771        265 KLGKRVVVIGGGNTAMDAARTARRLGAEEVVIVYRRTREEMPAHAFEIDDALREGVEINWLRTPVE-VEKDEDGVTGLRV  343 (560)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCEE-EECCCCEEEEEEE
T ss_conf             568868998998228999999997389769998314420289998999878747956896346479-9806985989999


Q ss_pred             ----------------CCHHHCCEEEEECCCHHHHHH
Q ss_conf             ----------------893146799993599689999
Q gi|254780924|r  508 ----------------ANIEKARSLVVSISTAFEAAY  528 (609)
Q Consensus       508 ----------------~~i~~a~~vi~~~~~~~~n~~  528 (609)
T Consensus       344 ~~~~~~e~g~~~~~g~~~~i~aD~VI~AiGq~~d~~~  380 (560)
T PRK12771        344 EKMELDEKGEPGPTGEFFTLEADMVVLAIGQDTDSEF  380 (560)
T ss_pred             EEEEECCCCCCCCCCCCEEEECCEEEECCCCCCCCCH
T ss_conf             9999889988788997267546899992257887300