HHsearch alignment for GI: 254780924 and conserved domain: PRK13856

Probab=95.32  E-value=0.18  Score=27.00  Aligned_cols=99  Identities=13%  Similarity=0.087  Sum_probs=64.9

Q ss_pred             CCEEEECCCHHHHHHHH----HCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCC-HHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             90899719989999999----7699299978999899984893146799993599-689999999999958988089994
Q gi|254780924|r  472 IALLVIEDSEKKIEELR----SLGIDVIYGNATITKILLMANIEKARSLVVSIST-AFEAAYITQEARNSNPSILIIALA  546 (609)
Q Consensus       472 ~~v~vid~~~~~~~~~~----~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~-~~~n~~~~~~~~~~~~~~~iia~~  546 (609)
T Consensus         2 ~~ILlVEDD~~l~~~l~~~L~~~g~~v~~a~-~~~~~~~~l~~~~~DlvIlDi~lp~~~Gl~~~~~ir~~~~~-piiilt   79 (241)
T PRK13856          2 KHVLVIDDDVAMRHLIVEYLTIHAFKVTAVA-DSQQFNRVLSSETVDVVVVDLNLGREDGLEIVRSLATKSDV-PIIIIS   79 (241)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCC-CEEEEE
T ss_conf             9899996989999999999987799999989-99999999865999999996999876613455564036997-369997


Q ss_pred             C---CHHHHHHHHHCCCCEEECHHHHHHH
Q ss_conf             6---9899999997699878765899999
Q gi|254780924|r  547 D---SDSEVEHLTRYGADTVVMSAREIAL  572 (609)
Q Consensus       547 ~---~~~~~~~l~~~Ga~~vi~p~~~~a~  572 (609)
T Consensus        80 ~~~~~~~d~i~~l~~GADDYl~KPf~~~E  108 (241)
T PRK13856         80 GDRLEEADKVVALELGATDFIAKPFGTRE  108 (241)
T ss_pred             CCCCCHHHHHHHHHCCCCEEEECCCCHHH
T ss_conf             26787899999987699889977767779