HHsearch alignment for GI: 254780924 and conserved domain: TIGR02354
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF; InterPro: IPR012729 Members of the HesA/MoeB/ThiF family of proteins (IPR000594 from INTERPRO) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees. The Escherichia coli ThiF and MoeB proteins are seemingly more closely related than the E. coli ThiF and Campylobacter (for example) ThiF. This entry represents the divergent clade of putative ThiF proteins as found in Campylobacter..
Probab=96.16 E-value=0.017 Score=34.08 Aligned_cols=98 Identities=18% Similarity=0.164 Sum_probs=70.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEE-EECCCHHHHHHHHHCCCCE---------------------EECC----CCC
Q ss_conf 7817997377489999999984799089-9719989999999769929---------------------9978----999
Q gi|254780924|r 448 CDHVILVGYGRIGKVIVQNLKAAGIALL-VIEDSEKKIEELRSLGIDV---------------------IYGN----ATI 501 (609)
Q Consensus 448 ~~~vii~G~g~~g~~~~~~L~~~~~~v~-vid~~~~~~~~~~~~g~~~---------------------~~gd----~~~ 501 (609)
T Consensus 21 ~a~VAicGlGGLGS~~AinLAR~GigkLiLvDfDvvepsNLnRQqY~~s~~G~~KteAlke~i~einPy~~ie~~d~ki~ 100 (200)
T TIGR02354 21 KASVAICGLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKVSDVGKKKTEALKENISEINPYVEIEIIDEKID 100 (200)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 58278970161168999999873022025664043236656132578762486217999987865088421231102127
Q ss_pred HHHHHHCCHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 899984893146799993599689999999999958988089994
Q gi|254780924|r 502 TKILLMANIEKARSLVVSISTAFEAAYITQEARNSNPSILIIALA 546 (609)
Q Consensus 502 ~~~l~~~~i~~a~~vi~~~~~~~~n~~~~~~~~~~~~~~~iia~~ 546 (609)
T Consensus 101 E~N~~~-~fkdaDiv~EAFDna~aKam~~n~vl~~ykdk~li~AS 144 (200)
T TIGR02354 101 EENLDK-LFKDADIVCEAFDNAEAKAMLVNAVLEKYKDKKLIAAS 144 (200)
T ss_pred HHHHHH-HHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 667987-84067478871699889999999999767864587602