HHsearch alignment for GI: 254780924 and conserved domain: TIGR02632
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=96.80 E-value=0.035 Score=31.83 Aligned_cols=141 Identities=13% Similarity=0.065 Sum_probs=82.0
Q ss_pred CCCCCCCCCCCCEEEE--CCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEECCCCCHHHH-HHCCHHHCCE
Q ss_conf 1222321347817997--377489999999984799089971998999999976992999789998999-8489314679
Q gi|254780924|r 439 EVTIQKTDLCDHVILV--GYGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSLGIDVIYGNATITKIL-LMANIEKARS 515 (609)
Q Consensus 439 ~~~~~~~~~~~~vii~--G~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l-~~~~i~~a~~ 515 (609)
T Consensus 414 ~rmP~ek~LA~~Va~VtGGasGIG~~~A~rL~~eGAhvV~aD~d~~~a~~va~~-~~~~fG~d~a~AGsdisaCGPaiGl 492 (709)
T TIGR02632 414 RRMPKEKELARRVAFVTGGASGIGRETARRLVDEGAHVVLADLDAEAAEAVAAE-IVDKFGADKAVAGSDISACGPAIGL 492 (709)
T ss_pred HCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH-HHHHCCCCCEECCCCHHCCCCCEEE
T ss_conf 247659671570688973886526899999973697799962365789999999-8631388812114320004671002
Q ss_pred EEEECCCHHHHHHHHHHHHHHCCCCEEEEEE------CCHHHHH--HHHHCCCCEEECHHHHHHHHHHHHHHHH
Q ss_conf 9993599689999999999958988089994------6989999--9997699878765899999999998742
Q gi|254780924|r 516 LVVSISTAFEAAYITQEARNSNPSILIIALA------DSDSEVE--HLTRYGADTVVMSAREIALGMLDRLNQV 581 (609)
Q Consensus 516 vi~~~~~~~~n~~~~~~~~~~~~~~~iia~~------~~~~~~~--~l~~~Ga~~vi~p~~~~a~~~~~~l~~~ 581 (609)
T Consensus 493 ~~DvT~e~~v~~~f~~v~~~yG-GvD~vv~nAGi~~S~p~~~t~r~~~W~l~~di~atG~FLVareA~r~~~~Q 565 (709)
T TIGR02632 493 KLDVTDEEAVKAAFAEVALAYG-GVDIVVNNAGIAVSSPLEETERLEEWDLNLDILATGYFLVAREAARLMRKQ 565 (709)
T ss_pred EEEECCHHHHHHHHHHHHHHHC-CEEEEEECCCHHCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHC
T ss_conf 7631758999999999999749-847876525301057702322155432012010120035888999999731