HHsearch alignment for GI: 254780924 and conserved domain: TIGR03201
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.65 E-value=0.034 Score=31.94 Aligned_cols=86 Identities=20% Similarity=0.310 Sum_probs=60.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEECCCCC---HHHHHH-------CCHHH-CCEEE
Q ss_conf 81799737748999999998479908997199899999997699299978999---899984-------89314-67999
Q gi|254780924|r 449 DHVILVGYGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSLGIDVIYGNATI---TKILLM-------ANIEK-ARSLV 517 (609)
Q Consensus 449 ~~vii~G~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~g~~~~~gd~~~---~~~l~~-------~~i~~-a~~vi 517 (609)
T Consensus 168 ~~V~V~G~G~iGl~a~~~ak~~Ga~Vi~vd~~~~rle~a~~~Ga~~~i~-~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~ 246 (349)
T TIGR03201 168 DLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLN-PKDKSAREVKKLIKAFAKARGLRSTGWKIF 246 (349)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEC-CCCCCHHHHHHHHHHHCCCCCCCCCCCEEE
T ss_conf 8899989748999999999985997999949999999999649989987-876778999999975414567565563699
Q ss_pred EECCCHHHHHHHHHHHHH
Q ss_conf 935996899999999999
Q gi|254780924|r 518 VSISTAFEAAYITQEARN 535 (609)
Q Consensus 518 ~~~~~~~~n~~~~~~~~~ 535 (609)
T Consensus 247 e~~G~~~~~~~a~~~~~~ 264 (349)
T TIGR03201 247 ECSGSKPGQESALSLLSH 264 (349)
T ss_pred EECCCHHHHHHHHHHCCC
T ss_conf 824888999999997358