HHsearch alignment for GI: 254780924 and conserved domain: cd01483
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.71 E-value=0.1 Score=28.69 Aligned_cols=34 Identities=32% Similarity=0.580 Sum_probs=28.1
Q ss_pred CEEEECCCHHHHHHHHHHHHCCC-CEEEECCCHHH
Q ss_conf 17997377489999999984799-08997199899
Q gi|254780924|r 450 HVILVGYGRIGKVIVQNLKAAGI-ALLVIEDSEKK 483 (609)
Q Consensus 450 ~vii~G~g~~g~~~~~~L~~~~~-~v~vid~~~~~ 483 (609)
T Consensus 1 kVlivG~GglG~~va~~L~~~Gv~~i~ivD~D~v~ 35 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVE 35 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 99999979899999999999379719999789875