HHsearch alignment for GI: 254780924 and conserved domain: cd05292
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.74 E-value=0.038 Score=31.62 Aligned_cols=108 Identities=17% Similarity=0.251 Sum_probs=64.4
Q ss_pred CEEEECCCHHHHHHHHHHHHCCC--CEEEECCCHHHHHHHHHC--------C-CCEEECCCCCHHHHHHCCHHHCCEEEE
Q ss_conf 17997377489999999984799--089971998999999976--------9-929997899989998489314679999
Q gi|254780924|r 450 HVILVGYGRIGKVIVQNLKAAGI--ALLVIEDSEKKIEELRSL--------G-IDVIYGNATITKILLMANIEKARSLVV 518 (609)
Q Consensus 450 ~vii~G~g~~g~~~~~~L~~~~~--~v~vid~~~~~~~~~~~~--------g-~~~~~gd~~~~~~l~~~~i~~a~~vi~ 518 (609)
T Consensus 2 KI~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~DL~~a~~~~~~~~i~~~~---~---~--~l~daDvVVi 73 (308)
T cd05292 2 KVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGD---Y---A--DCKGADVVVI 73 (308)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECC---H---H--HHCCCCEEEE
T ss_conf 799999488899999999867998879999188984512568766241036881684099---9---9--9779999998
Q ss_pred ECCC---------H--HHHH----HHHHHHHHHCCCCEEEEEECCHHHHH--HHHH-CC--CCEEECH
Q ss_conf 3599---------6--8999----99999999589880899946989999--9997-69--9878765
Q gi|254780924|r 519 SIST---------A--FEAA----YITQEARNSNPSILIIALADSDSEVE--HLTR-YG--ADTVVMS 566 (609)
Q Consensus 519 ~~~~---------~--~~n~----~~~~~~~~~~~~~~iia~~~~~~~~~--~l~~-~G--a~~vi~p 566 (609)
T Consensus 74 taG~~rk~g~tR~dll~~Na~I~~~i~~~i~~~~p~~iv-ivvsNPvDv~t~~~~k~sg~p~~rViG~ 140 (308)
T cd05292 74 TAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAIL-LVVTNPVDVLTYVAYKLSGLPPNRVIGS 140 (308)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE-EECCCCHHHHHHHHHHHCCCCCHHEEEC
T ss_conf 999999989987899988899999999999841998089-9727954789999999729980226602