HHsearch alignment for GI: 254780924 and conserved domain: pfam01758
>pfam01758 SBF Sodium Bile acid symporter family. This family consists of Na+/bile acid co-transporters. These transmembrane proteins function in the liver in the uptake of bile acids from portal blood plasma a process mediated by the co-transport of Na+. Also in the family is ARC3 from S. cerevisiae; this is a putative transmembrane protein involved in resistance to arsenic compounds.
Probab=96.33 E-value=0.07 Score=29.80 Aligned_cols=67 Identities=22% Similarity=0.354 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999988254168899984151---5889989999999999999999-96788689999999997423899
Q gi|254780924|r 56 IGIILLMFGVGLHFSVKDLISVRG---IALPGALIQIILGTALGALMGM-VMGWSLGGSVVFGLALSIASTVV 124 (609)
Q Consensus 56 lgl~~llF~~Gleld~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~lg~~~~~all~g~~l~~ts~~v 124 (609)
T Consensus 2 i~L~~mMf~mgl~l~~~d~~~~~~~Pk~~~~gl~~q~ii~Pllaf~l~~~~~~~~~--~~~~Glil~~~~Pgg 72 (188)
T pfam01758 2 LGLFLMMFSMGLKVRYEDFKELFRRPKALLLGLLLQWVIMPLLMFILAWFLLRLPP--ELAVGLILVGCAPGG 72 (188)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHCCCCC
T ss_conf 62499888562575399999998181999999999999999999999999937988--899888962107864