HHsearch alignment for GI: 254780924 and conserved domain: pfam02558
>pfam02558 ApbA Ketopantoate reductase PanE/ApbA. This is a family of 2-dehydropantoate 2-reductases also known as ketopantoate reductases, EC:1.1.1.169. The reaction catalysed by this enzyme is: (R)-pantoate + NADP(+) <= 2-dehydropantoate + NADPH. AbpA catalyses the NADPH reduction of ketopantoic acid to pantoic acid in the alternative pyrimidine biosynthetic (APB) pathway. ApbA and PanE are allelic. ApbA, the ketopantoate reductase enzyme is required for the synthesis of thiamine via the APB biosynthetic pathway.
Probab=97.71 E-value=0.00069 Score=43.63 Aligned_cols=113 Identities=18% Similarity=0.292 Sum_probs=75.4
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEECCC--C--CHHHH-HHCCHHHCCEEEEECCCHHH
Q ss_conf 7997377489999999984799089971998999999976992999789--9--98999-84893146799993599689
Q gi|254780924|r 451 VILVGYGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSLGIDVIYGNA--T--ITKIL-LMANIEKARSLVVSISTAFE 525 (609)
Q Consensus 451 vii~G~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~g~~~~~gd~--~--~~~~l-~~~~i~~a~~vi~~~~~~~~ 525 (609)
T Consensus 1 I~IiGaGaiG~~~a~~L~~ag~~V~lv~R~~-~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~~~ 79 (150)
T pfam02558 1 IAILGAGAVGSLYGARLARAGHDVTLIARGR-HLEAIRENGLRITSPGGERTVPPPVATSASEELGPADLVIVAVKAYQT 79 (150)
T ss_pred CEEECCCHHHHHHHHHHHHCCCEEEEEECCC-HHHHHHHCCEEEEECCCCEEEECCEECCCHHHCCCCCEEEEEECCCCH
T ss_conf 9999668999999999997799289997563-678877497699947983898074103865765886799997224588
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-CCCCEEE
Q ss_conf 99999999995898808999469899999997-6998787
Q gi|254780924|r 526 AAYITQEARNSNPSILIIALADSDSEVEHLTR-YGADTVV 564 (609)
Q Consensus 526 n~~~~~~~~~~~~~~~iia~~~~~~~~~~l~~-~Ga~~vi 564 (609)
T Consensus 80 ~~al~~l~~~l~~~t~iv~lqNG~g~~e~l~~~~~~~~v~ 119 (150)
T pfam02558 80 AEALEDLAPLLGPNTVVLLLQNGLGHEEELREAFPRERVL 119 (150)
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEE
T ss_conf 9999998865288838999425877399999875998799