HHsearch alignment for GI: 254780924 and conserved domain: pfam02719
>pfam02719 Polysacc_synt_2 Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI).
Probab=94.87 E-value=0.11 Score=28.35 Aligned_cols=92 Identities=14% Similarity=0.170 Sum_probs=55.2
Q ss_pred ECCCHHHHHHHHHHHHCC-CCEEEECCCHHHHH----HHH----HCCCCEEECCCCCHHHHHHCCH-HHCCEEEE--EC-
Q ss_conf 737748999999998479-90899719989999----999----7699299978999899984893-14679999--35-
Q gi|254780924|r 454 VGYGRIGKVIVQNLKAAG-IALLVIEDSEKKIE----ELR----SLGIDVIYGNATITKILLMANI-EKARSLVV--SI- 520 (609)
Q Consensus 454 ~G~g~~g~~~~~~L~~~~-~~v~vid~~~~~~~----~~~----~~g~~~~~gd~~~~~~l~~~~i-~~a~~vi~--~~- 520 (609)
T Consensus 5 GGaGFIGS~Lv~~Ll~~g~~~v~v~d~~~~~~~~~~~~l~~~~~~~~~~~~~~DI~D~~~l~~~~~~~~~D~V~HlAA~~ 84 (280)
T pfam02719 5 GGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIEQELREEYNDPKLRFFIGDVRDRERLERAMEEYGVDTVFHAAALK 84 (280)
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECHHHC
T ss_conf 48867999999999968998899990887427789999886267898389981168989999998754999999810311
Q ss_pred ------CCH----HHHH----HHHHHHHHHCCCCEEEEEE
Q ss_conf ------996----8999----9999999958988089994
Q gi|254780924|r 521 ------STA----FEAA----YITQEARNSNPSILIIALA 546 (609)
Q Consensus 521 ------~~~----~~n~----~~~~~~~~~~~~~~iia~~ 546 (609)
T Consensus 85 ~V~~s~~~P~~~~~~Nv~gT~nlLe~a~~~~vk-~~v~~S 123 (280)
T pfam02719 85 HVPLVEYNPMEAIKTNVLGTENVAEAAIENGVE-KFVLIS 123 (280)
T ss_pred CCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCC-EEECCC
T ss_conf 653276699999988727779999888853962-455147