HHsearch alignment for GI: 254780924 and conserved domain: pfam05368
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=98.37 E-value=1.8e-05 Score=54.47 Aligned_cols=91 Identities=15% Similarity=0.250 Sum_probs=71.7
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCEEEECCCHH--HHHHHHHCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCCH----
Q ss_conf 799737-74899999999847990899719989--99999976992999789998999848931467999935996----
Q gi|254780924|r 451 VILVGY-GRIGKVIVQNLKAAGIALLVIEDSEK--KIEELRSLGIDVIYGNATITKILLMANIEKARSLVVSISTA---- 523 (609)
Q Consensus 451 vii~G~-g~~g~~~~~~L~~~~~~v~vid~~~~--~~~~~~~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~---- 523 (609)
T Consensus 1 IlV~GatG~iG~~vv~~L~~~g~~Vr~l~R~~~~~~~~~l~~~gve~v~gD~~d~~sl~~a-l~gvd~v~~~~~~~~~~~ 79 (232)
T pfam05368 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVEA-LKGVDVVFSVTGFWLSKE 79 (232)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHH-HCCCCEEEEECCCCCCHH
T ss_conf 0998968289999999998589938999718736656666417988999068887899999-679988999158874177
Q ss_pred -HHHHHHHHHHHHHCCCCEEE
Q ss_conf -89999999999958988089
Q gi|254780924|r 524 -FEAAYITQEARNSNPSILII 543 (609)
Q Consensus 524 -~~n~~~~~~~~~~~~~~~ii 543 (609)
T Consensus 80 ~~~~~~~~~AA~~aGVk-~~V 99 (232)
T pfam05368 80 IEDGKKLADAAKEAGVK-HFI 99 (232)
T ss_pred HHHHHHHHHHHHHCCCC-CEE
T ss_conf 99999999999973998-345