HHsearch alignment for GI: 254780924 and conserved domain: pfam06965
>pfam06965 Na_H_antiport_1 Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyse the exchange of H+ for Na+ in a manner that is highly dependent on the pH.
Probab=98.31 E-value=0.00013 Score=48.61 Aligned_cols=268 Identities=17% Similarity=0.101 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHH----HHHCCHHH--HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHHHH
Q ss_conf 99999999999999882541688999----84151588--99899999999999999999678868999999-9997423
Q gi|254780924|r 49 LVPALAEIGIILLMFGVGLHFSVKDL----ISVRGIAL--PGALIQIILGTALGALMGMVMGWSLGGSVVFG-LALSIAS 121 (609)
Q Consensus 49 ~l~~l~~lgl~~llF~~Gleld~~~l----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lg~~~~~all~g-~~l~~ts 121 (609)
T Consensus 50 l~~wiNDgLMaiFFf~vGLEiKrE~~~GeLs~~r~a~lPi~AA~GGm~vPAliY~~~n~--~--~~~~-~~GW~IP~ATD 124 (374)
T pfam06965 50 LHHWINDGLMALFFLLVGLEIKRELLEGELRSPRQAALPGIAALGGMIVPALIYLLLNY--G--DPET-VSGWAIPMATD 124 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHEECC--C--CCCC-CCCCCCCCHHH
T ss_conf 99998756999999999999997641786798788888899998144098998810225--8--9510-14635444547
Q ss_pred HHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999987656554-114405789899877778999999999986134443301356789999887653210147999999
Q gi|254780924|r 122 TVVLLKALQENRI-LETDRGKIAVGWLIVEDLIIVLALVLIPAAATNYSAEPSSMTHPWTSFITQQMGFEVGMPGLIMIT 200 (609)
Q Consensus 122 ~~vv~~~l~~~~~-~~~~~g~~~~~~~~~~Di~~i~~l~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (609)
T Consensus 125 IAFAlgvlallG~rvP~~lr~FLlaLAIvDDlgaI~VIA~FY---t~~i~---~--------------------~~L~~a 178 (374)
T pfam06965 125 IAFALGVLALLGSRVPASLKIFLLALAIVDDLGAILIIALFY---SEELS---L--------------------AALLGA 178 (374)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEE---CCCCC---H--------------------HHHHHH
T ss_conf 999999999965768879999999999986211225788861---89754---9--------------------999999
Q ss_pred HHHHCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------
Q ss_conf 9841010000100034454387764203567368999999999999998887411002466666422202761-------
Q gi|254780924|r 201 LLKVVAFIGVMLIFGRRVIPWILHMIFYTGSRELFRLGVLAIALGFAYGSSKLFGVSLSLGAFFAGMILAESE------- 273 (609)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~s~~lgaf~aG~~l~~~~------- 273 (609)
T Consensus 179 ~~----~~~~l~---------~l~~~-~v~~~~~y~~~g~~~-----W~~~~~SGvHaTiAGV~la~~iP~~~~~~~~~~ 239 (374)
T pfam06965 179 AL----GIAVLA---------LLNRL-GVRSLLPYLVLGVIL-----WFAVLKSGVHATLAGVILGLLIPLKKRKGEPAA 239 (374)
T ss_pred HH----HHHHHH---------HHHHC-CCCCHHHHHHHHHHH-----HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99----999999---------99974-985214999999999-----999975144188898888840456654457655
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HHH-HHHHHHHHHHHHHHHHHHHHHHHHCC----------CCCC
Q ss_conf --45689999976689999999988653114798--862-02567777655542212232110002----------5587
Q gi|254780924|r 274 --LSQSAAQESLPLRDAFSVLFFISVGMMFNPDI--LIS-NPILLMMAVIIVIIGKALIAFIVVIA----------FGRS 338 (609)
Q Consensus 274 --~~~~~~~~~~~~~~~~~~~fFv~iG~~l~~~~--l~~-~~~~~l~~~~~~~~~k~~~~~~~~~~----------~~~~ 338 (609)
T Consensus 240 ~spl~rleh~L~p~v~~~IlPlFAfaNAGV~l~~~~~~~~~~pv~lGI~lGL~vGK~lGI~~~s~lavkl~~~~lP~g~~ 319 (374)
T pfam06965 240 HSPLERLEHALHPWVAFAILPLFAFANAGVSLAGMTLDDLTSPLTLGIALGLVVGKPIGIFGFSWLAVKLGLAKLPEGIS 319 (374)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 89899999975423798999999985068654677535311769999999998064388999999999946577999998
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf 9999998643212202567889887641
Q gi|254780924|r 339 VATALTIAASLSQIGEFSFILANLGVEL 366 (609)
Q Consensus 339 ~~~~~~~g~~l~~~g~~~~v~a~~a~~~ 366 (609)
T Consensus 320 w~~i~gv~~LaGIGFTmSLfIa~LAF~~ 347 (374)
T pfam06965 320 WGQIFGVAILCGIGFTMSLFIGSLAFPG 347 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999999999999986699