HHsearch alignment for GI: 254780924 and conserved domain: pfam06965

>pfam06965 Na_H_antiport_1 Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyse the exchange of H+ for Na+ in a manner that is highly dependent on the pH.
Probab=98.31  E-value=0.00013  Score=48.61  Aligned_cols=268  Identities=17%  Similarity=0.101  Sum_probs=132.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHH----HHHCCHHH--HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHHHH
Q ss_conf             99999999999999882541688999----84151588--99899999999999999999678868999999-9997423
Q gi|254780924|r   49 LVPALAEIGIILLMFGVGLHFSVKDL----ISVRGIAL--PGALIQIILGTALGALMGMVMGWSLGGSVVFG-LALSIAS  121 (609)
Q Consensus        49 ~l~~l~~lgl~~llF~~Gleld~~~l----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lg~~~~~all~g-~~l~~ts  121 (609)
T Consensus        50 l~~wiNDgLMaiFFf~vGLEiKrE~~~GeLs~~r~a~lPi~AA~GGm~vPAliY~~~n~--~--~~~~-~~GW~IP~ATD  124 (374)
T pfam06965        50 LHHWINDGLMALFFLLVGLEIKRELLEGELRSPRQAALPGIAALGGMIVPALIYLLLNY--G--DPET-VSGWAIPMATD  124 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHEECC--C--CCCC-CCCCCCCCHHH
T ss_conf             99998756999999999999997641786798788888899998144098998810225--8--9510-14635444547


Q ss_pred             HHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8999987656554-114405789899877778999999999986134443301356789999887653210147999999
Q gi|254780924|r  122 TVVLLKALQENRI-LETDRGKIAVGWLIVEDLIIVLALVLIPAAATNYSAEPSSMTHPWTSFITQQMGFEVGMPGLIMIT  200 (609)
Q Consensus       122 ~~vv~~~l~~~~~-~~~~~g~~~~~~~~~~Di~~i~~l~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (609)
T Consensus       125 IAFAlgvlallG~rvP~~lr~FLlaLAIvDDlgaI~VIA~FY---t~~i~---~--------------------~~L~~a  178 (374)
T pfam06965       125 IAFALGVLALLGSRVPASLKIFLLALAIVDDLGAILIIALFY---SEELS---L--------------------AALLGA  178 (374)
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEE---CCCCC---H--------------------HHHHHH
T ss_conf             999999999965768879999999999986211225788861---89754---9--------------------999999


Q ss_pred             HHHHCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------
Q ss_conf             9841010000100034454387764203567368999999999999998887411002466666422202761-------
Q gi|254780924|r  201 LLKVVAFIGVMLIFGRRVIPWILHMIFYTGSRELFRLGVLAIALGFAYGSSKLFGVSLSLGAFFAGMILAESE-------  273 (609)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~s~~lgaf~aG~~l~~~~-------  273 (609)
T Consensus       179 ~~----~~~~l~---------~l~~~-~v~~~~~y~~~g~~~-----W~~~~~SGvHaTiAGV~la~~iP~~~~~~~~~~  239 (374)
T pfam06965       179 AL----GIAVLA---------LLNRL-GVRSLLPYLVLGVIL-----WFAVLKSGVHATLAGVILGLLIPLKKRKGEPAA  239 (374)
T ss_pred             HH----HHHHHH---------HHHHC-CCCCHHHHHHHHHHH-----HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             99----999999---------99974-985214999999999-----999975144188898888840456654457655


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HHH-HHHHHHHHHHHHHHHHHHHHHHHHCC----------CCCC
Q ss_conf             --45689999976689999999988653114798--862-02567777655542212232110002----------5587
Q gi|254780924|r  274 --LSQSAAQESLPLRDAFSVLFFISVGMMFNPDI--LIS-NPILLMMAVIIVIIGKALIAFIVVIA----------FGRS  338 (609)
Q Consensus       274 --~~~~~~~~~~~~~~~~~~~fFv~iG~~l~~~~--l~~-~~~~~l~~~~~~~~~k~~~~~~~~~~----------~~~~  338 (609)
T Consensus       240 ~spl~rleh~L~p~v~~~IlPlFAfaNAGV~l~~~~~~~~~~pv~lGI~lGL~vGK~lGI~~~s~lavkl~~~~lP~g~~  319 (374)
T pfam06965       240 HSPLERLEHALHPWVAFAILPLFAFANAGVSLAGMTLDDLTSPLTLGIALGLVVGKPIGIFGFSWLAVKLGLAKLPEGIS  319 (374)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             89899999975423798999999985068654677535311769999999998064388999999999946577999998


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf             9999998643212202567889887641
Q gi|254780924|r  339 VATALTIAASLSQIGEFSFILANLGVEL  366 (609)
Q Consensus       339 ~~~~~~~g~~l~~~g~~~~v~a~~a~~~  366 (609)
T Consensus       320 w~~i~gv~~LaGIGFTmSLfIa~LAF~~  347 (374)
T pfam06965       320 WGQIFGVAILCGIGFTMSLFIGSLAFPG  347 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999999999999999986699