HHsearch alignment for GI: 254780925 and conserved domain: PRK05812
>PRK05812 secD preprotein translocase subunit SecD; Reviewed.
Probab=100.00 E-value=2.4e-31 Score=203.06 Aligned_cols=183 Identities=18% Similarity=0.446 Sum_probs=170.2
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 12444333321112101357899845799999999999999999999989999999999999999999997571456999
Q gi|254780925|r 644 EIVPLSTIQNTEIVGPKISRELIRKGIVGVIISAIAMLIYIWIRFKWYFALGAITTLILDITKTLGFFALFGIEFNLTAV 723 (833)
Q Consensus 644 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~a~~~al~~I~i~i~~rf~~~~~i~aiial~~~v~~~~g~~~~~g~~~~~~~i 723 (833)
T Consensus 326 aLP~~l~i~e~~tVgptLG~~si~~g~~A~~ig~~lV~~fmi~~Yr~-~G~~a~~aL~~~~~l~~~~l~~~~~tLTLpGI 404 (513)
T PRK05812 326 ALPAPLEIVEERTIGPSLGADSIRAGLIAGLIGLALVLLFMLLYYRL-FGLIANIALVANLLLILAVLSLLGATLTLPGI 404 (513)
T ss_pred CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHH
T ss_conf 77898655610788803009999999999999999999999999857-69999999999999999999995861538889
Q ss_pred HHHHHHHHHHHCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 99999997533574788721035555057799989999999987779999999999999999997053435663899999
Q gi|254780925|r 724 AAVLTLIGYSVNDKVVVYDRMRKNMKLYTTSISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVWGGSVIGSFAIPMAF 803 (833)
Q Consensus 724 ~~~l~iiG~svd~~I~~~~RirE~~~~~~~~~~~~~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~~~~~~~~f~~~~~~ 803 (833)
T Consensus 405 AGiiLtiGmavDanVlifERirEEl~---~G~~~~~ai~~G~~~A~~tI~dan~ttliaa~iL~~~g~G~vkGFA~tL~i 481 (513)
T PRK05812 405 AGIVLTIGMAVDANVLIFERIREELR---AGRSLQSAIEAGYERAFSTILDSNITTLIAAIILYALGTGPVKGFAVTLGI 481 (513)
T ss_pred HHHHHHHHHHHCCCEEHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 89998754300025412377799997---699889999999999999999967999999999999747781289999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999999986301220
Q gi|254780925|r 804 GIVVAASSSIFIAAPILLFIYDWRAKN 830 (833)
Q Consensus 804 gvi~~~~~sifi~~~~~~~~~~~~~k~ 830 (833)
T Consensus 482 gi~~s~fta~~~tr~l~~~~~~~~~~~ 508 (513)
T PRK05812 482 GILTSMFTAITVTRALVNLLYGGKRLK 508 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999999999996578886