HHsearch alignment for GI: 254780925 and conserved domain: PRK10555
>PRK10555 aminoglycoside/multidrug efflux system; Provisional.
Probab=100.00 E-value=0 Score=613.83 Aligned_cols=798 Identities=13% Similarity=0.079 Sum_probs=537.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHH
Q ss_conf 97517999999999999999996310243404457420476742211012785499998433675189887899999998
Q gi|254780925|r 1 MRNNPWLVILYSMICCIGLLIALPNFLPQSMLDRFPSAMPKNRISLGLDLRGGSHLVLEVDEDDFVNGFLQMYSDELRSF 80 (833)
Q Consensus 1 mr~~~~~~il~~~i~l~g~~~~lp~~~~~~~~~~~P~~~p~~~i~lGLDL~GG~~v~~~~~~~~~~~~~v~~~~e~l~~~ 80 (833)
T Consensus 6 i~~pv~~~~l~~~l~~~G~~s-----~~~lp~~~~P~i~~p~v-~--------V~~~~pGasp~~vE~~Vt~piE~~l~~ 71 (1037)
T PRK10555 6 IDRPIFAWVLAILLCLTGTLA-----IFSLPVEQYPDLAPPNV-R--------ITANYPGASAQTLENTVTQVIEQNMTG 71 (1037)
T ss_pred HCCHHHHHHHHHHHHHHHHHH-----HHHCCHHHCCCCCCCEE-E--------EEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 629499999999999999999-----98396621899998579-9--------999969999999999989999999728
Q ss_pred HHHCCCEEEEEE-EECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEECCCCCCCHHH
Q ss_conf 620591265898-3199799996697678999999999999874417654457731423677511687513456651268
Q gi|254780925|r 81 LKKEGIGVFSMR-QIQNKITLSFADSRFKENIADKVTLFLQGVNSKLNVDPKKNLLVTTTEKEISIVLSQNNIDQVISHA 159 (833)
Q Consensus 81 v~~~~~~~sts~-~~~~~I~V~f~~~~d~~~a~~~v~~~v~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (833)
T Consensus 72 v~gv~~i~S~s~~~G~s~i~v~f~~~~d~~~a~~~v~~~v~~~~~~LP~~~~~p~i~~~~~~~~~~~~~~~~~~~~~~~~ 151 (1037)
T PRK10555 72 LDNLMYMSSQSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDK 151 (1037)
T ss_pred CCCEEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCH
T ss_conf 99807999997178179999999789998999999999999888539975467864411468740799999917999799
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98778887631123103465421012573012333468988985412698999888740012344455565334666651
Q gi|254780925|r 160 IEQSMEIIRQRIDQIGISESTIQRLGSHRILIQLPGEQDPSRLRQLLGTTAKMSFHKVLPNNSKKGFMFGVRFLRDSDGN 239 (833)
Q Consensus 160 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (833)
T Consensus 152 ~~l~~~~~~~l~~~L~~v~GV~~V~~~G~-~~ei~I~~dp~kL~~~gls~~~v~~ai~~~n~~~~~G~l~g~~~~~~~~~ 230 (1037)
T PRK10555 152 QDIADYVASNIQDPLSRVNGVGDIDAYGS-QYSMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQLGGTPSVDKQAL 230 (1037)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCC-CEEEEEEECHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
T ss_conf 99999999999999736999369873377-27999998899998869899999999986232057875578765456527
Q ss_pred EEECCCCCEEECCEECCCCCCCCCCCCCCCEECCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 00026750120211101111223333221000012332210110010000012322110000001332000123334432
Q gi|254780925|r 240 QYLVEDKVEISGIHLNGATANFDPKTHKPVVDISFDEMGARRFFEVTRDNIGKPLAVVLDGRVLTAPVINQAIPSGKAQI 319 (833)
Q Consensus 240 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (833)
T Consensus 231 ~~~i~----~~~~~~~~~~---------i~~i~i~~~~~G~~v~L~DvA~V~~~~~~~~~~~r~nG~~av~l~V~~~~~a 297 (1037)
T PRK10555 231 NATIN----AQSLLQTPEQ---------FRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGA 297 (1037)
T ss_pred EEEEE----CCCCCCCHHH---------HHCCEEEECCCCCEEEEEEEEEEECCCCCCCEEEEECCCCEEEEEEEECCCC
T ss_conf 99996----2201089989---------8215788569997899851478831556653036646876378998743887
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 10135788765444321100001223333320110011024578888889999999999997303203566667777778
Q gi|254780925|r 320 SGNFTIETAGILAAMLRAGSLPIKLNIVEERNVGADLGSDSIYKGTCAIVAGLVLIVLFMIVLYGKWGLVADFSIFLNVI 399 (833)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvvvvv~l~l~~~r~~li~~iaIpisii 399 (833)
T Consensus 298 n~v~v~~~V~~~l~~l~~~lP~g~~i~~~~D~s~~i~~~i~~v~~~~~~g~ilv~lvl~lfL~~~R~aliv~~~IPis~l 377 (1037)
T PRK10555 298 NEMATAKLVLNRLDELAQYFPHGLEYKIAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLM 377 (1037)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
T ss_conf 68999999999999877547888537885022688999999999999999999998899875056532799983422788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999998766557899999986533578999999987631-025557999999999999999976556899988876
Q gi|254780925|r 400 LTLALLSLLGATLTLPSIAGIVLGIGLAVDSNILVNERIREEN-RKNQSVFCSLDMGFSRAYSTIFDSNITALIATVVLF 478 (833)
Q Consensus 400 ~tl~~l~~~G~tLn~~sl~gl~~~~g~~vd~~i~~~e~~~~~~-~~~~~~~~a~~~~~~~~~~~i~~~~~t~~~~~~~l~ 478 (833)
T Consensus 378 ~t~~~m~~~G~slN~iSL~gliialGilVDdaIVV~EnI~r~~~~~G~~~~~Aa~~g~~ev~~~v~~stltti~vFlPl~ 457 (1037)
T PRK10555 378 GTFSVLYAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMA 457 (1037)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998296052788999888654301020333468999998749998999999998764467889999999985898
Q ss_pred HCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-----CCCC----CCCCCCEEECCCCC
Q ss_conf 1455---4431147887788899877775113999999861366775564333-----2210----10122001002221
Q gi|254780925|r 479 FFGG---GAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMKSIDINPL-----SRFF----LIPDCIAIQFMRAR 546 (833)
Q Consensus 479 ~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~i~f~~~~ 546 (833)
T Consensus 458 f~~G~~G~~f~~~~~tv~~al~~Sl~vAl~l~P~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~l~~~l~~~ 537 (1037)
T PRK10555 458 FFGGTTGAIYRQFSITIVSAMVLSVLVAMILTPALCATLLKPLKKGEHHGQKGFFGWFNRMFNRNAERYEKGVAKILHRS 537 (1037)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 63551326777798999999999999999988999998567767654333201789999999999999999999999999
Q ss_pred EEEEECCHHHCCCCCCCCCCCCCCC-CCCCCCCEEEEEECCCCCCHHHH-------------------------------
Q ss_conf 0221100110021222112222345-55556603799971775788999-------------------------------
Q gi|254780925|r 547 FWGVGISILFSICSICLLFTHGLNY-GIDFKGGIQLGVLANRPVDLSVV------------------------------- 594 (833)
Q Consensus 547 ~~~~~~s~~li~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 594 (833)
T Consensus 538 ~~~~~~~~~l~~~~~~l~~~l~~~f~P~~d~~~~~v~v~~p~Gtsle~t~~~~~~ie~~l~~~~~~~v~~~~~~ig~~~~ 617 (1037)
T PRK10555 538 LRWILIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEKVENYYFTHEKDNIMSVFATVGSGPG 617 (1037)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
T ss_conf 99999999999999999997463537877775699999948998899999999999999751588866999998445788
Q ss_pred ---------------------------------HHHHHHHHHCCC-----------------------------------
Q ss_conf ---------------------------------885555420023-----------------------------------
Q gi|254780925|r 595 ---------------------------------RSNLESLQIGDI----------------------------------- 606 (833)
Q Consensus 595 ---------------------------------~~~~~~~~~~~~----------------------------------- 606 (833)
T Consensus 618 ~~~~~~~~~~v~L~~~~~r~~~~~~~~~ii~~~~~~~~~i~~~~~~~~~~~~~~~~g~~~~~~i~l~~~~g~~~~~L~~~ 697 (1037)
T PRK10555 618 GNGQNVARMFIRLKDWDERDSKTGSSFAIIERATKAFNKIKEARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAA 697 (1037)
T ss_pred CCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
T ss_conf 88875058999916767658742219999999998750377717862068533577888762589996478778999999
Q ss_pred ----------------------------------------------------------CCCC-CCCCCCEEEEEEC----
Q ss_conf ----------------------------------------------------------3323-5687640244311----
Q gi|254780925|r 607 ----------------------------------------------------------SFQN-FDGEKNFLVRLQY---- 623 (833)
Q Consensus 607 ----------------------------------------------------------~~~~-~~~~~~~~~~~~~---- 623 (833)
T Consensus 698 a~~l~~~l~~~pgv~~v~~~~~~~~~e~~i~id~~~a~~~Gls~~~ia~~l~~a~~G~~~~~~~~~~~~~~v~vr~~~~~ 777 (1037)
T PRK10555 698 RNQLLALAAENPELTRVRHNGLDDSPQLQIDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPY 777 (1037)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCHHH
T ss_conf 99999997439983886225667971599996899998719999999988887626830002202781320157417232
Q ss_pred --------------------------------------------------CCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf --------------------------------------------------555420235678877754101244433332
Q gi|254780925|r 624 --------------------------------------------------QPGDSVAQTRVLEMVKKKITEIVPLSTIQN 653 (833)
Q Consensus 624 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (833)
T Consensus 778 r~~~~~L~~~~i~~~~G~~vpL~~va~i~~~~~~~~I~r~n~~r~i~v~a~~~~~~~~~~~~~~~~~~~~~l-P~--g~~ 854 (1037)
T PRK10555 778 RMLPDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDVMESLVKQL-PN--GFG 854 (1037)
T ss_pred CCCHHHHHHCEEECCCCCEEECCCEEEEEEECCCCCEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHC-CC--CCE
T ss_conf 159667830411157886743020058875048740355166489999996189977799999999999868-99--928
Q ss_pred CCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 111210135-789984579999999999999999999-998999999999999999999999757145699999999997
Q gi|254780925|r 654 TEIVGPKIS-RELIRKGIVGVIISAIAMLIYIWIRFK-WYFALGAITTLILDITKTLGFFALFGIEFNLTAVAAVLTLIG 731 (833)
Q Consensus 654 ~~~v~~~~~-~~~~~~~~~a~~~al~~I~i~i~~rf~-~~~~i~aiial~~~v~~~~g~~~~~g~~~~~~~i~~~l~iiG 731 (833)
T Consensus 855 ~~~~g~~~~~~~~~~~~~~~~~lal~li~liL~~~F~S~~~pliIl~~IPl~~iG~~l~l~l~g~~l~~~s~iG~i~L~G 934 (1037)
T PRK10555 855 LEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIG 934 (1037)
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99800779999998779999999999999999999851999999999999999999999999868825999999999999
Q ss_pred HHHCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHH
Q ss_conf 5335747887210355550577999899999999877799999999999999999970---5343566389999999999
Q gi|254780925|r 732 YSVNDKVVVYDRMRKNMKLYTTSISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVW---GGSVIGSFAIPMAFGIVVA 808 (833)
Q Consensus 732 ~svd~~I~~~~RirE~~~~~~~~~~~~~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~---~~~~~~~f~~~~~~gvi~~ 808 (833)
T Consensus 935 IvVnn~Illvd~~n~~~---~~g~~~~~Ai~~a~~~RlRPIlmTtlTTi~GllPlal~~g~g~~~~~plai~iigGL~~s 1011 (1037)
T PRK10555 935 LSAKNAILIVEFANEMN---QKGHDLFEATLHASRQRLRPILMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISA 1011 (1037)
T ss_pred HHHHCHHHHHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99838407999999999---869999999999999848899999999999999998426885887621799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999998630122036
Q gi|254780925|r 809 ASSSIFIAAPILLFIYDWRAKNAR 832 (833)
Q Consensus 809 ~~~sifi~~~~~~~~~~~~~k~~~ 832 (833)
T Consensus 1012 t~ltL~~vP~ly~l~~r~~~~~~~ 1035 (1037)
T PRK10555 1012 TILAIFFVPLFFVLVRRRFPLKPR 1035 (1037)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999998805689977