HHsearch alignment for GI: 254780925 and conserved domain: PRK10614
>PRK10614 multidrug efflux system subunit MdtC; Provisional.
Probab=100.00 E-value=0 Score=634.36 Aligned_cols=793 Identities=14% Similarity=0.107 Sum_probs=561.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHH
Q ss_conf 97517999999999999999996310243404457420476742211012785499998433675189887899999998
Q gi|254780925|r 1 MRNNPWLVILYSMICCIGLLIALPNFLPQSMLDRFPSAMPKNRISLGLDLRGGSHLVLEVDEDDFVNGFLQMYSDELRSF 80 (833)
Q Consensus 1 mr~~~~~~il~~~i~l~g~~~~lp~~~~~~~~~~~P~~~p~~~i~lGLDL~GG~~v~~~~~~~~~~~~~v~~~~e~l~~~ 80 (833)
T Consensus 8 i~rp~~~~~l~~~l~~~G~~~-----~~~lp~~~~P~~~~p~v-~--------V~~~ypGasp~~vE~~Vt~piE~~l~~ 73 (1025)
T PRK10614 8 IYRPVATILLSLAITLCGILG-----FRLLPVAPLPQVDFPVI-M--------VSASLPGASPETMASSVATPLERSLGR 73 (1025)
T ss_pred HCCHHHHHHHHHHHHHHHHHH-----HHHCCHHHCCCCCCCEE-E--------EEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 739299999999999999999-----98496622899999569-9--------999969999999999989999999728
Q ss_pred HHHCCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCCCEECCCCCCCEEEEEECCCCCCCHHH
Q ss_conf 62059126589831997999966976789999999999998744176544-57731423677511687513456651268
Q gi|254780925|r 81 LKKEGIGVFSMRQIQNKITLSFADSRFKENIADKVTLFLQGVNSKLNVDP-KKNLLVTTTEKEISIVLSQNNIDQVISHA 159 (833)
Q Consensus 81 v~~~~~~~sts~~~~~~I~V~f~~~~d~~~a~~~v~~~v~~~~~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (833)
T Consensus 74 v~gv~~i~S~s~~g~s~i~v~f~~~~d~~~a~~~v~~~v~~~~~~lP~~~~~~p~~~~~~~~~~~v~~~~l~~d~~~~-- 151 (1025)
T PRK10614 74 IAGVNEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQ-- 151 (1025)
T ss_pred CCCCEEEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCH--
T ss_conf 999279999995781999999978999899999999999988862998666687466227775409999996799999--
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98778887631123103465421012573012333468988985412698999888740012344455565334666651
Q gi|254780925|r 160 IEQSMEIIRQRIDQIGISESTIQRLGSHRILIQLPGEQDPSRLRQLLGTTAKMSFHKVLPNNSKKGFMFGVRFLRDSDGN 239 (833)
Q Consensus 160 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (833)
T Consensus 152 ~~l~~~a~~~l~~~L~~i~GV~~V~~~G~~~~ei~I~~dp~kL~~~gls~~~v~~~l~~~n~~~~~G~~~~~~~~~~i~~ 231 (1025)
T PRK10614 152 GELYDFASTQLAQTIAQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRRPQGAIEDSTHRWQIQT 231 (1025)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEEEEE
T ss_conf 99999999999999857989269997278707999997899998859899999999975034578855732866899982
Q ss_pred EEECCCCCEEECCEECCCCCCCCCCCCCCCEECCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 00026750120211101111223333221000012332210110010000012322110000001332000123334432
Q gi|254780925|r 240 QYLVEDKVEISGIHLNGATANFDPKTHKPVVDISFDEMGARRFFEVTRDNIGKPLAVVLDGRVLTAPVINQAIPSGKAQI 319 (833)
Q Consensus 240 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (833)
T Consensus 232 ~~~~~~~~~i~----------~l--------~i~-~~-~G~~i~L~DvA~V~~~~~~~~~~~~~nG~~av~l~V~~~~~a 291 (1025)
T PRK10614 232 NDELKTAAEYQ----------PL--------IIH-YN-NGAAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEA 291 (1025)
T ss_pred CCCCCCHHHHH----------HH--------CCC-CC-CCCEEEECCEEEEECCCCCCCHHHHCCCCCCEEEEEEECCCC
T ss_conf 66337888975----------31--------200-68-993687400136622655530344217866279999956888
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 10135788765444321100001223333320110011024578888889999999999997303203566667777778
Q gi|254780925|r 320 SGNFTIETAGILAAMLRAGSLPIKLNIVEERNVGADLGSDSIYKGTCAIVAGLVLIVLFMIVLYGKWGLVADFSIFLNVI 399 (833)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvvvvv~l~l~~~r~~li~~iaIpisii 399 (833)
T Consensus 292 n~v~v~~~v~~~l~~~~~~lp~~~~i~~~~D~s~~i~~~i~~~~~~~~~g~~lv~~vl~lFL~~~R~~liv~~~IP~s~l 371 (1025)
T PRK10614 292 NIIQTVDSIRAKLPELRATIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATLIPAVAVPVSLI 371 (1025)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHH
T ss_conf 88999999999999887447877315884045098999899999999999999999999997300426124332237788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999987665578999999865335789999999876310255579999999999999999765568999888761
Q gi|254780925|r 400 LTLALLSLLGATLTLPSIAGIVLGIGLAVDSNILVNERIREENRKNQSVFCSLDMGFSRAYSTIFDSNITALIATVVLFF 479 (833)
Q Consensus 400 ~tl~~l~~~G~tLn~~sl~gl~~~~g~~vd~~i~~~e~~~~~~~~~~~~~~a~~~~~~~~~~~i~~~~~t~~~~~~~l~~ 479 (833)
T Consensus 372 ~~~~~m~~~G~slN~iSL~gl~lalG~lVDdAIVV~EnI~r~~~~G~~~~~Aa~~g~~ev~~pv~astlTti~vFlPl~f 451 (1025)
T PRK10614 372 GTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLL 451 (1025)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998197276899999887302334022222567799998399989999998888899999999999999989986
Q ss_pred CCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCC----CCCCEEECCCCCEEEEE
Q ss_conf 455---4431147887788899877775113999999861366775564333-221010----12200100222102211
Q gi|254780925|r 480 FGG---GAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMKSIDINPL-SRFFLI----PDCIAIQFMRARFWGVG 551 (833)
Q Consensus 480 ~~~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~i~f~~~~~~~~~ 551 (833)
T Consensus 452 ~~G~~G~~~~~i~~tv~~aL~~SlivAltliP~l~~~~lk~~~~~~~~~~~~~~~~~~~l~~~Y~~~L~~~l~~~~~~l~ 531 (1025)
T PRK10614 452 MGGLPGRLLREFAVTLSVAIGISLVVSLTLTPMMCGWMLKSSKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGV 531 (1025)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 57862002135577899999999999999899999986668886433101115689999999999999999953099999
Q ss_pred CCHHHCCCCCCCCCCCCCCCCCC-------------------------------------------CCC-----CEEEEE
Q ss_conf 00110021222112222345555-------------------------------------------566-----037999
Q gi|254780925|r 552 ISILFSICSICLLFTHGLNYGID-------------------------------------------FKG-----GIQLGV 583 (833)
Q Consensus 552 ~s~~li~~~~~~~~~~~~~~~~~-------------------------------------------~~~-----~~~~~~ 583 (833)
T Consensus 532 i~~~~l~ls~~l~~~l~~~f~P~~d~~~i~v~i~~p~g~sle~~~~~~~~~~~~l~~~p~v~~v~~~~g~~~~~~~~~~i 611 (1025)
T PRK10614 532 VLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFI 611 (1025)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEE
T ss_conf 99999999999997476555776776469999986999889999999999999973698838999851677776624999
Q ss_pred ECC----CCCCHHHH----HHHHHHHHHCC--------------------------------------------------
Q ss_conf 717----75788999----88555542002--------------------------------------------------
Q gi|254780925|r 584 LAN----RPVDLSVV----RSNLESLQIGD-------------------------------------------------- 605 (833)
Q Consensus 584 ~~~----~~~~~~~~----~~~~~~~~~~~-------------------------------------------------- 605 (833)
T Consensus 612 ~l~p~~~r~~~~~~~i~~lr~~l~~~pg~~~~~~~~~~~~~gg~~~~~~i~i~l~G~d~~~L~~~a~~l~~~l~~~~gv~ 691 (1025)
T PRK10614 612 TLKPRGERSETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKALAALPELA 691 (1025)
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 95253446667999999999987307783799843665556788888777999967999999999999999986399821
Q ss_pred ------------------------------------------CCCCC-CCCCCCEEEE----------------------
Q ss_conf ------------------------------------------33323-5687640244----------------------
Q gi|254780925|r 606 ------------------------------------------ISFQN-FDGEKNFLVR---------------------- 620 (833)
Q Consensus 606 ------------------------------------------~~~~~-~~~~~~~~~~---------------------- 620 (833)
T Consensus 692 dv~~~~~~~~~e~~i~~d~~~a~~lGlt~~~v~~~l~~~~~G~~v~~~~~~~~~~~v~v~~~~~~r~~~~~L~~l~i~~~ 771 (1025)
T PRK10614 692 DVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINN 771 (1025)
T ss_pred CCCCCCCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECHHHCCCHHHHHCEEEECC
T ss_conf 04466567982499996899998769997899999987417841125523884246999968344159776833376579
Q ss_pred --------------------------------EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-HHHHHHHH
Q ss_conf --------------------------------311555420235678877754101244433332111210-13578998
Q gi|254780925|r 621 --------------------------------LQYQPGDSVAQTRVLEMVKKKITEIVPLSTIQNTEIVGP-KISRELIR 667 (833)
Q Consensus 621 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~ 667 (833)
T Consensus 772 ~G~~VpLs~la~i~~~~~~~~I~r~~~~r~~~v~~~~~~g~~~~~~~~~i~~~l~~~~l-P~g~~~~~~G~~~~~~e~~~ 850 (1025)
T PRK10614 772 EGKAIPLSYFAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIERAMTQLGV-PSTVRGSFAGTAQVFQETMN 850 (1025)
T ss_pred CCCEEECCCEEEEEECCCCCCEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEECCHHHHHHHHHH
T ss_conf 99678700327899715840301327506999985069998799999999999985389-99649985408999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEHH
Q ss_conf 4579999999999999999999-998999999999999999999999757145699999999997533574788721035
Q gi|254780925|r 668 KGIVGVIISAIAMLIYIWIRFK-WYFALGAITTLILDITKTLGFFALFGIEFNLTAVAAVLTLIGYSVNDKVVVYDRMRK 746 (833)
Q Consensus 668 ~~~~a~~~al~~I~i~i~~rf~-~~~~i~aiial~~~v~~~~g~~~~~g~~~~~~~i~~~l~iiG~svd~~I~~~~RirE 746 (833)
T Consensus 851 ~l~~~~~~ai~li~llL~~~F~S~~~pliIl~~iPla~iG~~~gl~l~~~~ls~~s~iG~i~L~GivvnnaIllvd~~~~ 930 (1025)
T PRK10614 851 SQLILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALE 930 (1025)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 89999999999999999999833999999999999999999999999878856999999999999999572044878999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55505779998999999998777999999999999999999705---343566389999999999999999999999998
Q gi|254780925|r 747 NMKLYTTSISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVWG---GSVIGSFAIPMAFGIVVAASSSIFIAAPILLFI 823 (833)
Q Consensus 747 ~~~~~~~~~~~~~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~~---~~~~~~f~~~~~~gvi~~~~~sifi~~~~~~~~ 823 (833)
T Consensus 931 ~~~--~~~~~~~~Ai~~a~~~R~RPIlmTtlTti~GllPlal~~g~g~~~~~plA~~iigGL~~st~ltL~~vP~ly~~~ 1008 (1025)
T PRK10614 931 AQR--HGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFF 1008 (1025)
T ss_pred HHH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 998--579999999999999868899999999999999998756885777625499999999999999999999999999
Q ss_pred HHHHHHCCC
Q ss_conf 630122036
Q gi|254780925|r 824 YDWRAKNAR 832 (833)
Q Consensus 824 ~~~~~k~~~ 832 (833)
T Consensus 1009 ~~~~~~~~r 1017 (1025)
T PRK10614 1009 DRLRLRFSR 1017 (1025)
T ss_pred HHHHHHHCC
T ss_conf 999999705