HHsearch alignment for GI: 254780925 and conserved domain: PRK10614
>PRK10614 multidrug efflux system subunit MdtC; Provisional.
Probab=100.00 E-value=8.6e-31 Score=199.79 Aligned_cols=157 Identities=17% Similarity=0.178 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q ss_conf 8888999999999999730320356666777777889999999987665578999999865335789999999-876310
Q gi|254780925|r 365 TCAIVAGLVLIVLFMIVLYGKWGLVADFSIFLNVILTLALLSLLGATLTLPSIAGIVLGIGLAVDSNILVNER-IREENR 443 (833)
Q Consensus 365 ~~~~~~~lvvvvv~l~l~~~r~~li~~iaIpisii~tl~~l~~~G~tLn~~sl~gl~~~~g~~vd~~i~~~e~-~~~~~~ 443 (833)
T Consensus 855 ~~~~ai~li~llL~~~F~S~~~pliIl~~iPla~iG~~~gl~l~~~~ls~~s~iG~i~L~GivvnnaIllvd~~~~~~~~ 934 (1025)
T PRK10614 855 LIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRH 934 (1025)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 99999999999999998339999999999999999999999998788569999999999999995720448789999985
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 25557999999999999999976556899988876145---544311478877888998777751139999998613667
Q gi|254780925|r 444 KNQSVFCSLDMGFSRAYSTIFDSNITALIATVVLFFFG---GGAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKM 520 (833)
Q Consensus 444 ~~~~~~~a~~~~~~~~~~~i~~~~~t~~~~~~~l~~~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (833)
T Consensus 935 ~~~~~~~Ai~~a~~~R~RPIlmTtlTti~GllPlal~~g~g~~~~~plA~~iigGL~~st~ltL~~vP~ly~~~~~~~~~ 1014 (1025)
T PRK10614 935 GNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLR 1014 (1025)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999868899999999999999998756885777625499999999999999999999999999999999
Q ss_pred C
Q ss_conf 7
Q gi|254780925|r 521 K 521 (833)
Q Consensus 521 ~ 521 (833)
T Consensus 1015 ~ 1015 (1025)
T PRK10614 1015 F 1015 (1025)
T ss_pred H
T ss_conf 7