HHsearch alignment for GI: 254780925 and conserved domain: PRK12911

>PRK12911 bifunctional preprotein translocase subunit SecD/SecF; Reviewed.
Probab=100.00  E-value=0  Score=768.53  Aligned_cols=515  Identities=29%  Similarity=0.466  Sum_probs=434.3

Q ss_pred             ECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             01233344321013578876544432110000122333332011001102457888888999999999999730320356
Q gi|254780925|r  310 QAIPSGKAQISGNFTIETAGILAAMLRAGSLPIKLNIVEERNVGADLGSDSIYKGTCAIVAGLVLIVLFMIVLYGKWGLV  389 (833)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvvvvv~l~l~~~r~~li  389 (833)
T Consensus       859 ~~~l~~~a~~sg~fs~re~~~la~dlk~g~~sf~p~~l~e~~is~~lg~~~~~qgi~s~~~gla~~ii~M~VYYRf~GVI  938 (1405)
T PRK12911        859 NVPLKDHASVSGKFSHREVHRLATDLKSGAMSFVPEVLSEEVISPELGKSQRTQGIISVCLGLAVLIVLMSVYYRFGGVI  938 (1405)
T ss_pred             CCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             55433464321533288898888775058611565664101368000556785219999999999999999999876699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             66677777788999999998766557899999986533578999999987631025557999999999999999976556
Q gi|254780925|r  390 ADFSIFLNVILTLALLSLLGATLTLPSIAGIVLGIGLAVDSNILVNERIREENRKNQSVFCSLDMGFSRAYSTIFDSNIT  469 (833)
Q Consensus       390 ~~iaIpisii~tl~~l~~~G~tLn~~sl~gl~~~~g~~vd~~i~~~e~~~~~~~~~~~~~~a~~~~~~~~~~~i~~~~~t  469 (833)
T Consensus       939 AniALlLNlLLI~gaLa~lnATLTLPGIAGIVLTIGMAVDANVLIFERIREELr~GKSLr~AI~~GFkKAFSAI~DSNVT 1018 (1405)
T PRK12911        939 ASGAVLLNLLLIWAALQYLDAPLTLSGLAGIVLAMGMAVDANVLVFERIREEYLLSRSLSESVEAGYKKAFGAIFDSNLT 1018 (1405)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             99999999999999999838764550088999764001304479999999999769888999999987546888615199


Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEE
Q ss_conf             89998887614554431147887788899877775113999999861366775564333221010122001002221022
Q gi|254780925|r  470 ALIATVVLFFFGGGAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMKSIDINPLSRFFLIPDCIAIQFMRARFWG  549 (833)
Q Consensus       470 ~~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~  549 (833)
T Consensus      1019 TLIAA~ILF~FGTGPVKGFAVTLiIGIItSLFTALfITR~lf~~wv~k~k~~kL~~~------~kf~gik~DFmk~rKk~ 1092 (1405)
T PRK12911       1019 TVLASALLLMLDTGPIKGFALTLILGIFSSMFTALFMTKFFFMIWMNKTQETQLHMM------NKFIGIKHDFLKECKRL 1092 (1405)
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------CCCCCCCCCHHHHCCHH
T ss_conf             999999999964777306999999999999999999999999999733665554422------22347773567630178


Q ss_pred             EECCHHHCCCCCCCCCCCCCC--CCCCCCCCEEEEEECCC--CCCHHHHHHHHHHHHHC------CCCCCCCCCCCCEEE
Q ss_conf             110011002122211222234--55555660379997177--57889998855554200------233323568764024
Q gi|254780925|r  550 VGISILFSICSICLLFTHGLN--YGIDFKGGIQLGVLANR--PVDLSVVRSNLESLQIG------DISFQNFDGEKNFLV  619 (833)
Q Consensus       550 ~~~s~~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~  619 (833)
T Consensus      1093 ~iiS~aVIlIG~IaLgf~g~n~~LGIDFTGGtsitv~fs~~~~vDveqVR~~L~d~f~~aGls~~dvqVqT~gsseqIkI 1172 (1405)
T PRK12911       1093 WVVSGSVFVLGCVALGFGAWNSVLGMDFKGGYALTLNPSDVCIYDVAQMRSKLVKKFQQIGLSSRDFRIRTFDSSEKIKI 1172 (1405)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEE
T ss_conf             99999999999999998255766684617985899995577667899999999988885278866526873378761478


Q ss_pred             EEECCC------CCCCHHHHH---HHHHHHHHCCCCCC-------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             431155------542023567---88777541012444-------33332111210135789984579999999999999
Q gi|254780925|r  620 RLQYQP------GDSVAQTRV---LEMVKKKITEIVPL-------STIQNTEIVGPKISRELIRKGIVGVIISAIAMLIY  683 (833)
Q Consensus       620 ~~~~~~------~~~~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~~~a~~~al~~I~i~  683 (833)
T Consensus      1173 ~~s~n~l~rve~~e~~~te~~D~~la~v~giLse~g~d~s~esf~~tq~s~~KVGpsIg~ELr~nAIIAVliALIaILLY 1252 (1405)
T PRK12911       1173 YFSQNALSRVEADEGLSSEQNDHHLALVLGVLSDTGLDTSSETFNETQNFWFKVSGQLSNKMRTQATIALFGALAIILLY 1252 (1405)
T ss_pred             EECCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             62244210011023221000006789987654201432102444302575764778999999996999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHCCCCCCHH
Q ss_conf             999999998999999999999999999-----999757145699999999997533574788721035555057799989
Q gi|254780925|r  684 IWIRFKWYFALGAITTLILDITKTLGF-----FALFGIEFNLTAVAAVLTLIGYSVNDKVVVYDRMRKNMKLYTTSISFR  758 (833)
Q Consensus       684 i~~rf~~~~~i~aiial~~~v~~~~g~-----~~~~g~~~~~~~i~~~l~iiG~svd~~I~~~~RirE~~~~~~~~~~~~  758 (833)
T Consensus      1253 I~fRFeW~FALgAVVALlHDVLITLGVivi~~F~L~rIEIDltFIAAILTIIGYSINDTIVVFDRIRENlk~~-~~~~l~ 1331 (1405)
T PRK12911       1253 VSLRFEWRYAFSAICALIHDLLATCAVLVALHFFLQKIQIDLQAIGALMTVLGYSLNNTLIIFDRIREDRQEK-LFTPMP 1331 (1405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC-CCCCHH
T ss_conf             9988764329999999998999988999988776227255499999999994444058799987646764436-799789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999877799999999999999999970534356638999999999999999999999999863012203
Q gi|254780925|r  759 DLIDKSINETLGRSVYTSMAAFISVLPMAVWGGSVIGSFAIPMAFGIVVAASSSIFIAAPILLFIYDWRAKNA  831 (833)
Q Consensus       759 ~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~~~~~~~~f~~~~~~gvi~~~~~sifi~~~~~~~~~~~~~k~~  831 (833)
T Consensus      1332 eIVN~SINQTLSRTInTSLTTLLVLLaLfIFGGeSIrdFAFALLIGIVVGTYSSIFIASPLLLfL~rreer~~ 1404 (1405)
T PRK12911       1332 ILINDALQKTLGRTVMTTATTLSVLLILLFVGGGSIFNFAFIMTIGILLGTLSSLYIAPPLLLFMVRKEERNS 1404 (1405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
T ss_conf             9999999854235678889999999999996017899999999999998776489979999999818863258