>TIGR00833 actII Transport protein; InterPro: IPR004707 Characterised members of the Resistance-Nodulation-Cell Division (RND) superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. This group includes the Streptomyces coelicolor ActII3 protein, which may play a role in drug resistance, and the Mycobacterium tuberculosis MmpL7 protein, which catalyzes export of an outer membrane lipid, phthiocerol dimycocerosate.; GO: 0016021 integral to membrane.

Probab=100.00 E-value=5.2e-39 Score=248.83 Aligned_cols=460 Identities=15% Similarity=0.140 Sum_probs=285.4 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHH-HHHHHHHHHHHHHHHHHHHH Q ss_conf 88889999999999997303203566667777778899999999876655----78999-99986533578999999987 Q gi|254780925|r 365 TCAIVAGLVLIVLFMIVLYGKWGLVADFSIFLNVILTLALLSLLGATLTL----PSIAG-IVLGIGLAVDSNILVNERIR 439 (833) Q Consensus 365 ~~~~~~~lvvvvv~l~l~~~r~~li~~iaIpisii~tl~~l~~~G~tLn~----~sl~g-l~~~~g~~vd~~i~~~e~~~ 439 (833) T Consensus 186 i~a~t~~~vl~iLl~vYRS~i~~lvPL~~~~~s~v~a~g~v~lL~~~~~igv~~~~~~~~~a~~iGAGtDYa~fl~~RY~ 265 (992) T TIGR00833 186 ITATTVIIVLIILLLVYRSPITMLVPLVSVGVSVVVAQGIVSLLAETGLIGVSAFTVVLLTALVIGAGTDYAVFLIGRYH 265 (992) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHH T ss_conf 89999999999999998889999998889999999987889886101001367999999999999974212111110007 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH- Q ss_conf 63102555799999999999999997655689---99888761455443114788778889987777511399999986- Q gi|254780925|r 440 EENRKNQSVFCSLDMGFSRAYSTIFDSNITAL---IATVVLFFFGGGAVRGFAITMGLSILISMFTAISIVRAMMIFII- 515 (833) Q Consensus 440 ~~~~~~~~~~~a~~~~~~~~~~~i~~~~~t~~---~~~~~l~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~- 515 (833) T Consensus 266 E~rr~~~~~~~A~~~A~r~~g~aI~gsa~tv~tsl~~~l~Ls~a~l~~f~~lG~~~avG~l~~~L~A~tL~PAll~l~~e 345 (992) T TIGR00833 266 EERRKGEKKEEALAEALRGTGKAILGSALTVATSLVAFLALSLARLPSFKTLGVVCAVGVLVALLAALTLTPALLTLESE 345 (992) T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 86406888889999999988899998899999999999999998754432236999999999999999999999998014 Q ss_pred -HCCCCCCC--CCCCCCCCCCCCCCCEEECC-CCCEEEEECCHHHCCCCCCCCCC--CCCC------------------- Q ss_conf -13667755--64333221010122001002-22102211001100212221122--2234------------------- Q gi|254780925|r 516 -RYKKMKSI--DINPLSRFFLIPDCIAIQFM-RARFWGVGISILFSICSICLLFT--HGLN------------------- 570 (833) Q Consensus 516 -~~~~~~~~--~~~~~~~~~~~~~~~~i~f~-~~~~~~~~~s~~li~~~~~~~~~--~~~~------------------- 570 (833) T Consensus 346 fR~~~~kp~ei~~~G~~~~~~r~~wrR~G~~v~R~P~~~Lv~~sl~~~~v~~~a~~~~~~~~~~~~~~P~~~es~~G~~a 425 (992) T TIGR00833 346 FREGLLKPKEIIAIGKRKSKIRFLWRRLGTAVVRRPLPILVTSSLIISLVLLLALPLIRTNYDDEKAIPTKVESVQGYEA 425 (992) T ss_pred HHHHHCCCCCHHCCCCCCCEEEEEEHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHH T ss_conf 42420574210004897521220002000222057589999999999999997652277663044167877406789998 Q ss_pred ----CCCCCCCCEEEEEECCCCCCHHHHHHHHHHH------HHCCCCCCCCCCCC------------------------- Q ss_conf ----5555566037999717757889998855554------20023332356876------------------------- Q gi|254780925|r 571 ----YGIDFKGGIQLGVLANRPVDLSVVRSNLESL------QIGDISFQNFDGEK------------------------- 615 (833) Q Consensus 571 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~------------------------- 615 (833) T Consensus 426 ~~RHFp~~~~~P~~~~Ik~DhD~R~Pa~l~~i~~~~r~I~~~pgi~~V~~~~~~~G~~~~~t~~~f~aG~~g~~lde~~~ 505 (992) T TIGR00833 426 ADRHFPANSMEPMVVMIKSDHDLRNPAALADIERLEREIKAVPGIVMVQELQRPDGVVLKKTKVSFQAGELGDKLDEASK 505 (992) T ss_pred HHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHCCCCCHHHHHCCCHHHHHHH T ss_conf 60137666788248998378876783889999999999864788222355667688510001020225411653789999 Q ss_pred -------------------------------------------------------------------------------- Q ss_conf -------------------------------------------------------------------------------- Q gi|254780925|r 616 -------------------------------------------------------------------------------- 615 (833) Q Consensus 616 -------------------------------------------------------------------------------- 615 (833) T Consensus 506 ~l~~rGGe~~~l~~~~~~~a~~~a~~~neinGavasssGivn~~qa~~~l~gGdktirqlen~~q~~~~~r~mq~~~skl 585 (992) T TIGR00833 506 LLKERGGELDDLLQDAEKLAEAIAALRNEINGAVASSSGIVNLLQALMDLLGGDKTIRQLENLSQVVLAVREMQKALSKL 585 (992) T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 98841542676444799999999862000101243223389999999975146237788741579999999987544355 Q ss_pred -------------------------------------------------------------------------------- Q ss_conf -------------------------------------------------------------------------------- Q gi|254780925|r 616 -------------------------------------------------------------------------------- 615 (833) Q Consensus 616 -------------------------------------------------------------------------------- 615 (833) T Consensus 586 ~~~a~~~~d~~~P~r~~~~~~p~C~~~P~C~~~raqla~ivqa~d~Gllrsir~~~~~~~l~~~~g~lar~~~~~~~~l~ 665 (992) T TIGR00833 586 RDEAEDVADFFDPLRRYLAAEPECRADPVCRSARAQLAEIVQALDDGLLRSIRVVEVAEKLADAVGDLARTVALLDSALE 665 (992) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 41088899999999999741654357864356888999999874386001467999999999998889888866566430 Q ss_pred -------------------------------------------------------CEE--------------EEEEC--- Q ss_conf -------------------------------------------------------402--------------44311--- Q gi|254780925|r 616 -------------------------------------------------------NFL--------------VRLQY--- 623 (833) Q Consensus 616 -------------------------------------------------------~~~--------------~~~~~--- 623 (833) T Consensus 666 qv~~~~~a~dg~~t~la~~~~~a~g~~d~~n~~~A~~~EL~D~~~~~~~~~~~a~~~~~GikrdadkPsmaGfy~pp~if 745 (992) T TIGR00833 666 QVSSLLEALDGLRTKLAQMRESAAGVADLLNALAAALRELSDYVKTMGKLLGEAKGVDLGIKRDADKPSMAGFYLPPRIF 745 (992) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHC T ss_conf 36742665311135789998789999988888875765337899999986145778510332246774310013570332 Q ss_pred -------------------------CCCCC--CHHHHHHHHHHH----HHC---CCC-CCCCCCCCCCCCCHHHHHHHHH Q ss_conf -------------------------55542--023567887775----410---124-4433332111210135789984 Q gi|254780925|r 624 -------------------------QPGDS--VAQTRVLEMVKK----KIT---EIV-PLSTIQNTEIVGPKISRELIRK 668 (833) Q Consensus 624 -------------------------~~~~~--~~~~~~~~~~~~----~~~---~~~-~~~~~~~~~~v~~~~~~~~~~~ 668 (833) T Consensus 746 ~~~~fk~~~~~FlS~dGHAaR~~v~~~g~pa~~~~~~~~n~I~~~~~~~~~~~~L~~G~~~~LaG~~~~~~Dl~d~~n~D 825 (992) T TIGR00833 746 KDDEFKKALKIFLSADGHAARYLVLSAGDPASVEGIDEVNAIRTVAEEAIKEAELEDGAKVELAGVSAVLRDLRDLVNSD 825 (992) T ss_pred CCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCC T ss_conf 88258899984049953787888861588556899999999999999862278988970788546336788877641011 Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCC------CCCH-HHHHHHHHHHHHHHCCEEEE Q ss_conf 579999999999999999999-998999999999999999999999757------1456-99999999997533574788 Q gi|254780925|r 669 GIVGVIISAIAMLIYIWIRFK-WYFALGAITTLILDITKTLGFFALFGI------EFNL-TAVAAVLTLIGYSVNDKVVV 740 (833) Q Consensus 669 ~~~a~~~al~~I~i~i~~rf~-~~~~i~aiial~~~v~~~~g~~~~~g~------~~~~-~~i~~~l~iiG~svd~~I~~ 740 (833) T Consensus 826 l~~i~~~~l~~vf~I~~~llRa~vA~~~~ig~v~lS~~~alG~~~L~~~hilgf~~lh~~~l~~~f~~Lva~G~DYN~ll 905 (992) T TIGR00833 826 LGLIVIITLAIVFLILALLLRALVAPIVLIGSVALSYLAALGLSVLVFQHILGFAELHWSVLALVFVLLVAVGVDYNLLL 905 (992) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 38899999999999999998778999999999999999998899998777523201256756788888878776677999 Q ss_pred EEEEHHHH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 72103555-50577999899999999877799999999999999999970534356638999999999999999999999 Q gi|254780925|r 741 YDRMRKNM-KLYTTSISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVWGGSVIGSFAIPMAFGIVVAASSSIFIAAPI 819 (833) Q Consensus 741 ~~RirE~~-~~~~~~~~~~~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~~~~~~~~f~~~~~~gvi~~~~~sifi~~~~ 819 (833) T Consensus 906 ~~Ri~eE~d~~G~r-----~g~Ir~l~stG~ViT~AGLvfA~tm~aL~~~~l~~iaq~G~t~g~G~llDtl~vR~v~~pa 980 (992) T TIGR00833 906 VSRIKEESDPAGLR-----TGVIRALGSTGGVITAAGLVFAGTMFALVSAQLTAIAQVGFTVGVGILLDTLIVRSVTVPA 980 (992) T ss_pred HHHHHHHHHHCCCC-----CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999866314785-----5501022466840024689999999999987787777621598899999999999999999 Q ss_pred HH-HHHHHHHH Q ss_conf 99-98630122 Q gi|254780925|r 820 LL-FIYDWRAK 829 (833) Q Consensus 820 ~~-~~~~~~~k 829 (833) T Consensus 981 L~~~~GR~~WW 991 (992) T TIGR00833 981 LTLLLGRWLWW 991 (992) T ss_pred HHHHHHHHCCC T ss_conf 99985141058

HHsearch alignment for GI: 254780925 and conserved domain: TIGR00833