HHsearch alignment for GI: 254780925 and conserved domain: TIGR03480

>TIGR03480 HpnN hopanoid biosynthesis associated RND transporter like protein HpnN. The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Probab=99.94  E-value=1.2e-24  Score=163.11  Aligned_cols=141  Identities=18%  Similarity=0.219  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             88899999999999973032035666677777788999999998766557899999986533578999999987631025
Q gi|254780925|r  366 CAIVAGLVLIVLFMIVLYGKWGLVADFSIFLNVILTLALLSLLGATLTLPSIAGIVLGIGLAVDSNILVNERIREENRKN  445 (833)
Q Consensus       366 ~~~~~~lvvvvv~l~l~~~r~~li~~iaIpisii~tl~~l~~~G~tLn~~sl~gl~~~~g~~vd~~i~~~e~~~~~~~~~  445 (833)
T Consensus       718 ~~la~~~i~lll~l~fRs~~~~l~~liP~~l~~~~~~g~m~l~gi~ln~~t~~v~~l~iGIgVDy~Ih~~~r~r~~~~~~  797 (862)
T TIGR03480       718 FIYALVAITVLLLLTLRRVRDVLLVLAPLLLAGLLTVAAMVLLGIPFNFANIIALPLLLGLGVDFGIYMVHRWRNGVDSG  797 (862)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999995699999999999999999999999978997499999999998877520999999999653136


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             55799999999999999997655689998887614554431147887788899877775113999999
Q gi|254780925|r  446 QSVFCSLDMGFSRAYSTIFDSNITALIATVVLFFFGGGAVRGFAITMGLSILISMFTAISIVRAMMIF  513 (833)
Q Consensus       446 ~~~~~a~~~~~~~~~~~i~~~~~t~~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  513 (833)
T Consensus       798 ~~~~~-------~tg~Ai~~saltt~~GF~~L~~S~~~~~~~~G~~~~igi~~all~~l~~lPaLL~~  858 (862)
T TIGR03480       798 NLLQS-------STARAVFFSALTTATAFGSLAVSSHPGTASMGILLSLGLGLTLLCTLIFLPALLGK  858 (862)
T ss_pred             CHHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             61552-------79999999999999999999997588999999999999999999999998885489