HHsearch alignment for GI: 254780925 and conserved domain: pfam03176
>pfam03176 MMPL MMPL family. Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Probab=99.93 E-value=8.5e-24 Score=158.07 Aligned_cols=179 Identities=14% Similarity=0.186 Sum_probs=148.1
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC----CCCC
Q ss_conf 244433332111210135789984579999999999999999999-99899999999999999999999975----7145
Q gi|254780925|r 645 IVPLSTIQNTEIVGPKISRELIRKGIVGVIISAIAMLIYIWIRFK-WYFALGAITTLILDITKTLGFFALFG----IEFN 719 (833)
Q Consensus 645 ~~~~~~~~~~~~v~~~~~~~~~~~~~~a~~~al~~I~i~i~~rf~-~~~~i~aiial~~~v~~~~g~~~~~g----~~~~ 719 (833)
T Consensus 120 ~g~~v~vtG~~a~~~d~~~~~~~~~~~~~~~~~~l~~~~L~l~frS~~~~~~~l~~~~~s~~~~~g~~~~l~~~~~~~i~ 199 (332)
T pfam03176 120 EGLKAYLTGPAATVADLRDAGDRDLGLIEAVTLVVIFIILLIVYRSVVAALLPLLTVGLSLGAAQGLVAILAHILGIGLS 199 (332)
T ss_pred CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 99689997888888889988766678999999999999999998108999999999999999999999999985488708
Q ss_pred HHH-HHHHHHHHHHHHCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 699-9999999975335747887210355550577999899999999877799999999999999999970534356638
Q gi|254780925|r 720 LTA-VAAVLTLIGYSVNDKVVVYDRMRKNMKLYTTSISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVWGGSVIGSFA 798 (833)
Q Consensus 720 ~~~-i~~~l~iiG~svd~~I~~~~RirE~~~~~~~~~~~~~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~~~~~~~~f~ 798 (833)
T Consensus 200 ~~~~~~~~~l~~glgiDY~i~l~~R~ree~~~---g~~~~~A~~~a~~~~g~~i~~a~~t~~~~f~~l~~~~~~~~~~~G 276 (332)
T pfam03176 200 TFALNLLVVLLIAVGTDYALFLVSRYREELRA---GEDREEAVIRAVRGTGKVVTAAGLTVAIAMLALSFARLPVFAQVG 276 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 88999999999998776899999999999984---999899999999986699999999999999999975557899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999998630
Q gi|254780925|r 799 IPMAFGIVVAASSSIFIAAPILLFIYDW 826 (833)
Q Consensus 799 ~~~~~gvi~~~~~sifi~~~~~~~~~~~ 826 (833)
T Consensus 277 ~~~a~gv~~~~l~~ltllPAll~l~G~~ 304 (332)
T pfam03176 277 PTIAIGVLVDVLAALTLLPALLALLGRW 304 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999999999999991300