HHsearch alignment for GI: 254780925 and conserved domain: pfam07549
>pfam07549 Sec_GG SecD/SecF GG Motif. This family consists of various prokaryotic SecD and SecF protein export membrane proteins. This SecD and SecF proteins are part of the multimeric protein export complex comprising SecA, D, E, F, G, Y, and YajC. SecD and SecF are required to maintain a proton motive force. This alignment encompasses a -GG- motif typically found in N-terminal half of the SecD/SecF proteins.
Probab=95.73 E-value=0.0057 Score=33.83 Aligned_cols=23 Identities=43% Similarity=0.846 Sum_probs=19.5
Q ss_pred CCCCCCEECCCCEEEEEEECHHH
Q ss_conf 74221101278549999843367
Q gi|254780925|r 42 NRISLGLDLRGGSHLVLEVDEDD 64 (833)
Q Consensus 42 ~~i~lGLDL~GG~~v~~~~~~~~ 64 (833)
T Consensus 5 ~~l~lGlDf~GGt~i~~~~~~~~ 27 (29)
T pfam07549 5 RGLNLGLDFTGGTQILLEVDQPV 27 (29)
T ss_pred CCCCEEEECCCCEEEEEECCCCC
T ss_conf 33110042359838999736642