PSIBLAST alignment of GI: 254780925 and protein with PDB id: 2hqd
>gi|146387262|pdb|2HQD|A Chain A, Conformation Of The Acrb Multidrug Efflux Pump In Mutants Of The Putative Proton Relay Pathway Length = 1053
Score = 59.7 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/234 (13%), Positives = 73/234 (31%), Gaps = 8/234 (3%)
Query: 583 VLANRPVDLSVVRSNLESLQIGDISFQNFDGEKNFLVRLQYQPGDSVAQTRVLEMVKKKI 642
V A + + + G + ++G + + Q PG S + L
Sbjct: 791 VRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASK 850
Query: 643 TEIVPLSTIQNTEIVGPKISRELIRKGIVGVIISAIAMLIYIWIRFKWYFALGAITTLIL 702
+ + +I+ + + + W + + L
Sbjct: 851 LPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLA---ALYESWSIPFSVMLVVPL 907
Query: 703 DITKTLGFFALFGIEFNLTAVAAVLTLIGYSVNDKVVVYDRMRKNMKLYTTSISFRDLID 762
+ L G+ ++ +LT IG S + +++ + + M +
Sbjct: 908 GVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKG--LIEATL 965
Query: 763 KSINETLGRSVYTSMAAFISVLPMAVW---GGSVIGSFAIPMAFGIVVAASSSI 813
++ L + TS+A + V+P+ + G + + G+V A +I
Sbjct: 966 DAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAI 1019