RPSBLAST alignment for GI: 254780925 and conserved domain: TIGR00833

>gnl|CDD|129913 TIGR00833, actII, Transport protein. Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. This sub-family includes the S. coelicolor ActII3 protein, which may play a role in drug resistance, and the M. tuberculosis MmpL7 protein, which catalyzes export of an outer membrane lipid, phthiocerol dimycocerosate. Length = 910

 Score = 43.0 bits (101), Expect = 3e-04
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 8/170 (4%)

Query: 360 SIYKGTCAIVAGLVLIVLFMIVLYGK---WGLVADFSIFLNVILTLALLSLLG----ATL 412
           S  K    I A   +IVL +++L  +     LV   S+  +V++   ++SLLG      +
Sbjct: 170 SGDKDMNRITATTGIIVLIILLLVYRSPITMLVPLVSVGFSVVVAQGIVSLLGIPGLIGV 229

Query: 413 TLPSIAGIV-LGIGLAVDSNILVNERIREENRKNQSVFCSLDMGFSRAYSTIFDSNITAL 471
              +   +  L IG   D  + +  R  EE RK +S+  +           I  S +T  
Sbjct: 230 NAQTTVLLTALVIGAGTDYAVFLTGRYHEERRKGESLEEAAAEALRGTGKAILGSALTVA 289

Query: 472 IATVVLFFFGGGAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMK 521
           +A + L      + +   ++  + +L+++  A+++  A++    R   MK
Sbjct: 290 VAFLALSLARLPSFKTLGVSCAVGVLVALLNAVTLTPALLTLEGREGLMK 339