HHsearch alignment for GI: 254780927 and conserved domain: cd01556
>cd01556 EPSP_synthase EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EC 2.5.1.19) catalyses the reaction between shikimate-3-phosphate (S3P) and phosphoenolpyruvate (PEP) to form 5-enolpyruvylshkimate-3-phosphate (EPSP), an intermediate in the shikimate pathway leading to aromatic amino acid biosynthesis. The reaction is phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate. It is found in bacteria and plants but not animals. The enzyme is the target of the widely used herbicide glyphosate, which has been shown to occupy the active site. In bacteria and plants, it is a single domain protein, while in fungi, the domain is found as part of a multidomain protein with functions that are all part of the shikimate pathway.
Probab=99.87 E-value=1.6e-20 Score=153.10 Aligned_cols=290 Identities=19% Similarity=0.263 Sum_probs=182.3
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC--CCCCCCCCCCCCCEEEEEEE-CCCCCCCCCCCC--CCCCHH
Q ss_conf 3320121234333210332245686148999502443--33333343466611356650-444468733233--222015
Q gi|254780927|r 128 IGTRPVDLFVDSLKSLGVVIKIDGGYVDARVSSKGLR--GTSYTFPKVSVGATQVMMMV-ASLSHGDTSIYN--AAREPE 202 (430)
Q Consensus 128 l~~RP~~~l~~~L~~lGa~i~~~~g~~p~~i~g~~l~--g~~i~l~~~S~q~~s~lLla-A~~a~G~t~I~~--~~~~P~ 202 (430)
T Consensus 34 ~~~~Dv~~~~~~l~~lG~~i~~~~~~~~--i~~~~~~~~~~~~~l~~g~sGt~~R~l~~ll~~~~~~~~l~G~~~l~~RP 111 (409)
T cd01556 34 LDSDDTLATLEALRALGAKIEEEGGTVE--IVGGGGLGLPPEAVLDCGNSGTTMRLLTGLLALQGGDSVLTGDESLRKRP 111 (409)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCEEE--EECCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHCCCC
T ss_conf 9039999999999987998998089999--98888877787411100024121765766651588369983773425898
Q ss_pred HHHHHHHHHCCCCCCCCCCC-CCEEECCCCCCCCCCCEECCCCHH--CCHHHHHCCCCCCCEEEECCCCCCC---CCHHH
Q ss_conf 99899875014544320244-321202554222234200143100--0010000012444201002345642---10468
Q gi|254780927|r 203 VVDLAHCLNSMGAKISGMGS-STITIQGVTSLSGTRHRILPDRIE--AGTYAMAVAMTGGDVILKMTDSSLL---KTVFK 276 (430)
Q Consensus 203 i~~t~~~L~~~Gv~I~~~~~-~~i~I~g~~~l~~~~~~V~~D~ss--Aa~fl~Aaalt~g~i~i~n~~~~~~---~~~l~ 276 (430)
T Consensus 112 i~~~i~~L~~lGa~i~~~~~~~~~~~~~~~~l~~~~i~l~~~~SSQ~~SalLmaa~~a~g~t~i~~~~~es~~yvd~T~~ 191 (409)
T cd01556 112 MGRLVDALRQLGAEIEGREGGGYPPLIGGGGLKGGEVEIPGAVSSQFKSALLLAAPLAEGPTTIIIGELESKPYIDHTER 191 (409)
T ss_pred CHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
T ss_conf 46899999988999996279753347248995052899776455118879999987369957997467466119999999
Q ss_pred HHHHCCCCEEEECC-CEEEEECCCCCCEEEEECCCCCCCCCCC--HHHHHHHHHCCCCCEEEEEE-CCHHHHHHHHHHHH
Q ss_conf 89752674367445-1267532676431576215356664210--13466763135664167320-46567566788974
Q gi|254780927|r 277 VMRQTGVDIDIIDE-GIRVRWNGEKLRPVDVITAPFPGFPTDL--QAQFMAMMCCAAGISHITET-IFENRFMHVQELVR 352 (430)
Q Consensus 277 iL~~mGa~i~~~~~-~i~V~~~~~~l~~~di~~~~~pg~~~D~--~p~la~laa~A~G~s~I~e~-i~e~R~~~~~eL~k 352 (430)
T Consensus 192 ~L~~~Ga~I~~~~~~~i~I~g~-~~l~~~~~~V~------~D~s~A~~~l~aaalt~~~v~i~~v~~~~~d~~~~~~L~~ 264 (409)
T cd01556 192 MLRAFGAEVEVDGYRTITVKGG-QKYKGPEYTVE------GDASSAAFFLAAAAITGSEIVIKNVGLNSGDTGIIDVLKE 264 (409)
T ss_pred HHHHCCCEEEECCCEEEEECCC-CCCCCCEECCC------CCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
T ss_conf 9985798289639819997786-33467501378------8988999999999976994999077832117999999998
Q ss_pred CCCEEEEEC-CEEEEECCCCCEEEEEEEC---CHHHHHHHHHHHHHCCCEEEEECCCEECC----CCCCHHHHHHHCCCE
Q ss_conf 885899978-9699988898510156608---18999999999985498199924330117----784878899866978
Q gi|254780927|r 353 LGARISLSG-QTARVEGVQGLRGAPVMAT---DLRASVSLVIAALAAQGETEISRVYHLDR----GFECLEKKLSRCGAL 424 (430)
Q Consensus 353 lG~~v~~~~-d~l~I~G~~~l~g~~v~~~---DHRiaMa~~ia~L~a~g~~~I~~~~~i~k----syp~f~~~L~~LGa~ 424 (430)
T Consensus 265 mG~~i~~~~~~~i~~~~~~~l~~~~i~~~~~pD--l~p~lavla~~a~G~s~i~~~~~lr~KEsdRi~a~~~eL~k~Ga~ 342 (409)
T cd01556 265 MGADIEIGNEDTVVVESGGKLKGIDIDGNDIPD--EAPTLAVLAAFAEGPTRIRNAAELRVKESDRIAAMATELRKLGAD 342 (409)
T ss_pred CCCEEEEECCCEEEECCCCCCCCEEECCCCCCH--HHHHHHHHHHHCCCCEEEEECCCCCCEECCHHHHHHHHHHHCCCE
T ss_conf 799899946978997358885447825876860--579999999856897278732011203130789999999977997
Q ss_pred EEEE
Q ss_conf 9995
Q gi|254780927|r 425 IQRI 428 (430)
Q Consensus 425 Ie~i 428 (430)
T Consensus 343 i~~~ 346 (409)
T cd01556 343 VEET 346 (409)
T ss_pred EEEE
T ss_conf 9997