HHSEARCH alignment of GI: 254780927 and SCOP domain: d1g6sa_

Alignment
>d1g6sa_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]}
Probab=99.76  E-value=4.2e-17  Score=127.90  Aligned_cols=287  Identities=18%  Similarity=0.269  Sum_probs=184.7

Q ss_pred             CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC---CCCCCCCCCCCCCEEEEEEECCCCCC--CCCCCC--CCCC
Q ss_conf             3320121234333210332245686148999502443---33333343466611356650444468--733233--2220
Q gi|254780927|r  128 IGTRPVDLFVDSLKSLGVVIKIDGGYVDARVSSKGLR---GTSYTFPKVSVGATQVMMMVASLSHG--DTSIYN--AARE  200 (430)
Q Consensus       128 l~~RP~~~l~~~L~~lGa~i~~~~g~~p~~i~g~~l~---g~~i~l~~~S~q~~s~lLlaA~~a~G--~t~I~~--~~~~  200 (430)
                      +..+-+...+++|++||++|+.+++...+++.+.+..   .....++...++ +...++.+..+.+  .+.+.+  ...+
T Consensus        45 ~~~~Dv~~~~~~L~~LG~~i~~~~~~~~i~i~g~g~~~~~~~~~~i~~g~sg-t~~r~l~~l~~~~~~~v~l~G~~sL~~  123 (427)
T d1g6sa_          45 LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAG-TAMRPLAAALCLGSNDIVLTGEPRMKE  123 (427)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEECTTSCCEEEECCSSCCCCCTTEEEECTTCH-HHHHHHHHHTTSSEEEEEEECCGGGGG
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCEEECCCCC-HHEEEEEEEECCCCEEEECCCCCHHCC
T ss_conf             9239999999999986997999379509999957986566664100001220-110232233113432784366401102


Q ss_pred             HHHHHHHHHHHCCCCCCCCCC-CC--CEEECCCCCCCCCCCEECCCCHHCCH--HHHHCCCCCCCEEEE---CCC-CCCC
Q ss_conf             159989987501454432024-43--21202554222234200143100001--000001244420100---234-5642
Q gi|254780927|r  201 PEVVDLAHCLNSMGAKISGMG-SS--TITIQGVTSLSGTRHRILPDRIEAGT--YAMAVAMTGGDVILK---MTD-SSLL  271 (430)
Q Consensus       201 P~i~~t~~~L~~~Gv~I~~~~-~~--~i~I~g~~~l~~~~~~V~~D~ssAa~--fl~Aaalt~g~i~i~---n~~-~~~~  271 (430)
                      +.+...++.|+++|++|+..+ ..  -+.++|  .+.+.++.++.+.||...  .+.||++..+..+|+   |.. ....
T Consensus       124 Rp~~~~~~~L~~lGa~i~~~~~~~~~p~~i~g--~~~~~~i~~~~~~Ssq~~s~lllaA~~~~~~~~i~~~~~~~S~p~v  201 (427)
T d1g6sa_         124 RPIGHLVDALRLGGAKITYLEQENYPPLRLQG--GFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYI  201 (427)
T ss_dssp             SCCHHHHHHHHHTTCCEEESSSTTSSCEEEEE--CCCCEEEEEEESSCTHHHHHHHHHGGGSSSCEEEEEEEEECSTHHH
T ss_pred             CHHHHHHHHHHHCCCEEEEEECCCCEEEEECC--CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHH
T ss_conf             01456888998449889974056541599668--8766039988855707887899987762687489955655557213


Q ss_pred             CCHHHHHHHCCCCEEEECCCEEEEECC-CCCCEEEEECCCCCCCCCCC--HHHHHHHHHCCCCCEEEEEECCH----HHH
Q ss_conf             104688975267436744512675326-76431576215356664210--13466763135664167320465----675
Q gi|254780927|r  272 KTVFKVMRQTGVDIDIIDEGIRVRWNG-EKLRPVDVITAPFPGFPTDL--QAQFMAMMCCAAGISHITETIFE----NRF  344 (430)
Q Consensus       272 ~~~l~iL~~mGa~i~~~~~~i~V~~~~-~~l~~~di~~~~~pg~~~D~--~p~la~laa~A~G~s~I~e~i~e----~R~  344 (430)
                      ...++.|++||++++..+....+.... ....+.+..-.      .|+  ..+++++++...|..++++ +..    .+.
T Consensus       202 ~~t~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~v~------~D~s~Aa~~~~aa~l~~g~i~i~~-~~~~~~~~d~  274 (427)
T d1g6sa_         202 DITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVE------GDASSASYFLAAAAIKGGTVKVTG-IGRNSMQGDI  274 (427)
T ss_dssp             HHHHHHHHHTTCCCEEETTTEEEECSSCCCBCCSEEECC------BCHHHHHHHHHHHHHHEEEEEEES-CCTTCCCGGG
T ss_pred             HHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC------CHHHHHHHHHHHHHHHCCCEEECC-CCCCCCCCHH
T ss_conf             200011103454310123442223586113588368445------103135679998885057143054-0013231014


Q ss_pred             HHHHHHHHCCCEEEEECCEEEEECCCCCEEEEEEE---CCHHHHHHHHHHHHHCCCEEEEECCCEEC-CCCC---CHHHH
Q ss_conf             66788974885899978969998889851015660---81899999999998549819992433011-7784---87889
Q gi|254780927|r  345 MHVQELVRLGARISLSGQTARVEGVQGLRGAPVMA---TDLRASVSLVIAALAAQGETEISRVYHLD-RGFE---CLEKK  417 (430)
Q Consensus       345 ~~~~eL~klG~~v~~~~d~l~I~G~~~l~g~~v~~---~DHRiaMa~~ia~L~a~g~~~I~~~~~i~-ksyp---~f~~~  417 (430)
                      ..++.|++||++++..++.+.+.+ ..+++-.++.   +|-  ++.++++++.++|.+++.|+++++ |=+.   .+.+.
T Consensus       275 ~~~~~l~~~G~~i~~~~~~~~~~~-~~l~~~~~d~~~~pd~--~p~l~~la~~a~g~s~~~g~~~lr~KEsdRi~~~~~~  351 (427)
T d1g6sa_         275 RFADVLEKMGATICWGDDYISCTR-GELNAIDMDMNHIPDA--AMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATE  351 (427)
T ss_dssp             GHHHHHHHHTCEEEECSSEEEEEC-CCCBCCEEECTTSTTT--HHHHHHHGGGSBSCEEEESCGGGGGSSSCHHHHHHHH
T ss_pred             HHHHHHHHCCCCEEEECCCCCCCC-CCCCCEECCCCCCCCC--CHHHHHHHHHHCCCCCEECCCCCCEEEEHHHHHHHHH
T ss_conf             555555523550798404332221-2222020035226874--2269999765437631110443450884379999999


Q ss_pred             HHHCCCEEEE
Q ss_conf             9866978999
Q gi|254780927|r  418 LSRCGALIQR  427 (430)
Q Consensus       418 L~~LGa~Ie~  427 (430)
                      |+++|++++.
T Consensus       352 L~klG~~i~~  361 (427)
T d1g6sa_         352 LRKVGAEVEE  361 (427)
T ss_dssp             HHHTTCEEEE
T ss_pred             HHHCCCEEEE
T ss_conf             9977998999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: Enolpyruvate transferase, EPT
domain: 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase
species: Escherichia coli [TaxId: 562]