HHSEARCH alignment of GI: 254780927 and SCOP domain: d1qmha2

Alignment

Probab=93.01  E-value=0.25  Score=25.18  Aligned_cols=67  Identities=19%  Similarity=0.282  Sum_probs=35.6

Q ss_pred             CCEEEEEECCCCCCCCCCCCCCCCCCE----EEEEEECCCCCCCCCCC-----CCCCCHHHH----HHHHHHHCCCCCCC
Q ss_conf             614899950244333333343466611----35665044446873323-----322201599----89987501454432
Q gi|254780927|r  152 GYVDARVSSKGLRGTSYTFPKVSVGAT----QVMMMVASLSHGDTSIY-----NAAREPEVV----DLAHCLNSMGAKIS  218 (430)
Q Consensus       152 g~~p~~i~g~~l~g~~i~l~~~S~q~~----s~lLlaA~~a~G~t~I~-----~~~~~P~i~----~t~~~L~~~Gv~I~  218 (430)
                      |.--+...++.+++++|+.+..+++.+    ..+|.+++++++.++|.     |....|-++    -++-+|++||++++
T Consensus        69 gst~l~f~Pg~i~~g~~~~~~~tagsi~l~lq~llp~~~f~~~~~~l~l~GgT~~~~~psvd~~~~v~lp~l~~~G~~~~  148 (239)
T d1qmha2          69 GSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQ  148 (239)
T ss_dssp             TCCCEEEECCCCCCEEEEEEEEEEEEHHHHHHHHHHHHTTSSSCEEEEEEEECBBTTBCCTHHHHHTHHHHHHHTTCEEE
T ss_pred             CCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf             84799988984238758995689830167999999999638997699998234899898888999999999997699738

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: RNA 3'-terminal phosphate cyclase, RPTC
domain: RNA 3'-terminal phosphate cyclase, RPTC
species: Escherichia coli [TaxId: 562]