HHsearch alignment for GI: 254780928 and conserved domain: COG0016
>COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis].
Probab=98.14 E-value=3.4e-05 Score=52.88 Aligned_cols=144 Identities=22% Similarity=0.336 Sum_probs=89.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHH-HHHCCCCCCCCCCCC---EEEEECCCCCEEE
Q ss_conf 710379987658866899999999999999998598480165202288-752026755433322---1689869998899
Q gi|254780928|r 7 LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKG---VFSLQDDDGQWIS 82 (496)
Q Consensus 7 ~~~~~P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~-~~~~~~~~~~~~~k~---~y~f~D~~g~~l~ 82 (496)
T Consensus 96 ~dv~lp-~~-~~~~G~~Hpl~~~~e~i~~iF~~mGF~~~~gp~IE~d~~NFDaLn~P~dHPARdmqDTFy~~~~~~-~~l 172 (335)
T COG0016 96 IDVTLP-GR-RIYPGSLHPLTQTIEEIEDIFLGMGFTEVEGPEIETDFYNFDALNIPQDHPARDMQDTFYLKDDRE-KLL 172 (335)
T ss_pred CCCCCC-CC-CCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCC-CEE
T ss_conf 775788-86-677898670899999999999974966645882132022524324999998412444378768877-300
Q ss_pred ECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 9888838999999951120554112331013330258764442111110001210000245788999999999751
Q gi|254780928|r 83 LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158 (496)
Q Consensus 83 LRpDlT~~~aR~~~~~~~~~~~p~k~yy~g~vfR~e~p~~Gr~REf~Q~g~eiiG~~~~~~DaEii~l~~~~l~~l 158 (496)
T Consensus 173 LRTHTs~vq~R~l~~~~~---~P~k~~~~grvyR~D~~DaTHs~~FhQiEGlvvd~~~s~~--~Lkg~L~~f~~~~ 243 (335)
T COG0016 173 LRTHTSPVQARTLAENAK---IPIKIFSPGRVYRNDTVDATHSPEFHQIEGLVVDKNISFA--DLKGTLEEFAKKF 243 (335)
T ss_pred ECCCCCHHHHHHHHHCCC---CCCEEECCCCEECCCCCCCCCCHHEEEEEEEEEECCCCHH--HHHHHHHHHHHHH
T ss_conf 236682765999984799---9915845663411788776426101336789995895699--9999999999996