HHsearch alignment for GI: 254780928 and conserved domain: COG0173

Probab=98.96  E-value=1.7e-08  Score=74.28  Aligned_cols=102  Identities=27%  Similarity=0.444  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf             68999999999999999985984801652022887520267554333221689869998899988883899999995112
Q gi|254780928|r   21 KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD  100 (496)
Q Consensus        21 ~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~~~aR~~~~~~~  100 (496)
T Consensus       139 ~~l~lR~kv~~~iR~~ld~~gF~EiETPiL------tkSTPEGARD--fLVPSRv~~G~FYALPQ--SPQlfKQLLMvs-  207 (585)
T COG0173         139 KNLKLRSKVTKAIRNFLDDQGFLEIETPIL------TKSTPEGARD--FLVPSRVHPGKFYALPQ--SPQLFKQLLMVA-  207 (585)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCCC------CCCCCCCCCC--CCCCCCCCCCCEEECCC--CHHHHHHHHHHH-
T ss_conf             999999999999999776549857346741------4679865544--30134558996530688--879999999880-


Q ss_pred             HCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             055411233101333025876444211111000121
Q gi|254780928|r  101 TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV  136 (496)
Q Consensus       101 ~~~~p~k~yy~g~vfR~e~p~~Gr~REf~Q~g~eii  136 (496)
T Consensus       208 Gf---dRYyQIarCFRDEDlRaDRQPEFTQiD~EmS  240 (585)
T COG0173         208 GF---DRYYQIARCFRDEDLRADRQPEFTQIDLEMS  240 (585)
T ss_pred             CC---CCEEEEEEEECCCCCCCCCCCCCEEEEEEEE
T ss_conf             53---3002356540466444446875336767764