HHsearch alignment for GI: 254780928 and conserved domain: COG2024
>COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) [Translation, ribosomal structure and biogenesis].
Probab=91.74 E-value=0.055 Score=32.08 Aligned_cols=81 Identities=22% Similarity=0.456 Sum_probs=39.0
Q ss_pred HHHHCCCCCCCCCCCHHHCCCCCCC-CCEEEEEEECCCCCC---CCCCCCCEEEECCCCCCCCC-CCCCCCCCCCCCEEE
Q ss_conf 9875088844300110100122123-412489985466677---67666310110032323552-111234567742133
Q gi|254780928|r 278 LVRKSGYNSNRIKISSTIVRGLEYY-TGCVYEAILGFPVMN---EKQKPVVFGSVGGGGRYDGL-VSRFKGQNVPATGFS 352 (496)
Q Consensus 278 ~l~~~gv~~~~i~~Dl~lvRgLdYY-TG~vFE~~~~~~~~~---~~~~~~~~~aI~~GGRYD~L-~~~f~~~~~pavGfa 352 (496)
T Consensus 255 lL~qfGFe--~F~FrpDEK~-SKYYvP~TQTEVyAyHPkL~gs~~kysdgWi-EiATFGlYSP~ALaeY-~Id~pVMNLG 329 (536)
T COG2024 255 LLRQFGFE--KFRFRPDEKK-SKYYVPGTQTEVYAYHPKLVGSIEKYSDGWI-EIATFGLYSPIALAEY-GIDYPVMNLG 329 (536)
T ss_pred HHHHHCCC--CEEECCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCCCCCCE-EEEEECCCCHHHHHHC-CCCCCEEECC
T ss_conf 99971940--0354662003-5534799630477745400365212588708-9996035672779872-9997012032
Q ss_pred ECCHHHHHHHH
Q ss_conf 11016899999
Q gi|254780928|r 353 IGISRLIVALK 363 (496)
Q Consensus 353 igverl~~~l~ 363 (496)
T Consensus 330 lGVERlaMIl~ 340 (536)
T COG2024 330 LGVERLAMILH 340 (536)
T ss_pred HHHHHHHHHHH
T ss_conf 20899999981