HHsearch alignment for GI: 254780928 and conserved domain: KOG0556

Probab=97.76  E-value=0.00033  Score=46.44  Aligned_cols=112  Identities=24%  Similarity=0.391  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCC-CEEEECCCCHHHHHHHHHHHHHHC
Q ss_conf             9999999999999998598480165202288752026755433322168986999-889998888389999999511205
Q gi|254780928|r   24 RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG-QWISLRYDLTAPLARYVAENFDTI  102 (496)
Q Consensus        24 ~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g-~~l~LRpDlT~~~aR~~~~~~~~~  102 (496)
T Consensus       229 riq~gvc~~FRe~L~~kgF~EIhTpKl-----i~asSEG----GanvF~v~Yfk~~A~LAQSPQLyKQMa--I~g---d-  293 (533)
T KOG0556         229 RIQAGVCFAFREYLRSKGFVEIHTPKL-----IGASSEG----GANVFRVSYFKQKAYLAQSPQLYKQMA--ICG---D-  293 (533)
T ss_pred             EHHHHHHHHHHHHHHHCCCCEECCCCC-----CCCCCCC----CCEEEEEEECCCCCHHHCCHHHHHHHH--HHC---C-
T ss_conf             068889999999997568604326320-----1466777----722689986067503205858887788--760---6-


Q ss_pred             CCCHHHHHHHHHHCCCCCCCC-CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             541123310133302587644-42111110001210000245788999999999
Q gi|254780928|r  103 VFPCRTYRIGPVFRNEKHGPG-RFRQFIQCDVDNVGSSAETADAEMCMMMADTL  155 (496)
Q Consensus       103 ~~p~k~yy~g~vfR~e~p~~G-r~REf~Q~g~eiiG~~~~~~DaEii~l~~~~l  155 (496)
T Consensus       294 -f-~rVyeIGpVfRAEdSnthRhltEFvGLD~EMaf~~h---YhEVm~~i~~lf  342 (533)
T KOG0556         294 -F-ERVYEIGPVFRAEDSNTHRHLTEFVGLDLEMAFNEH---YHEVMDTIGELF  342 (533)
T ss_pred             -H-HHEEEECCEEECCCCCHHHHHHHHHCCCHHHHHHHH---HHHHHHHHHHHH
T ss_conf             -1-104652355660446416666776174225477777---999999999999