HHsearch alignment for GI: 254780928 and conserved domain: KOG1885
>KOG1885 consensus.
Probab=98.24 E-value=0.00012 Score=49.33 Aligned_cols=99 Identities=26% Similarity=0.376 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 89999999999999999859848016520228875202675543332216898699988999888838999999951120
Q gi|254780928|r 22 EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT 101 (496)
Q Consensus 22 ~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~~~aR~~~~~~~~ 101 (496)
T Consensus 224 ~f~~RakII~~iRkfld~rgFlEVETPmmn~-----iaGGA~Ak---PFIT~hndldm~LylRiAPEL~lK~LvVGGl-- 293 (560)
T KOG1885 224 RFRIRAKIISYIRKFLDSRGFLEVETPMMNM-----IAGGATAK---PFITHHNDLDMDLYLRIAPELYLKMLVVGGL-- 293 (560)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEECCHHHCC-----CCCCCCCC---CEEECCCCCCCCEEEEECHHHHHHHHHHCCH--
T ss_conf 9999999999999986544956844465525-----46863257---6043145567551456365999998986017--
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
Q ss_conf 554112331013330258764442111110001
Q gi|254780928|r 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134 (496)
Q Consensus 102 ~~~p~k~yy~g~vfR~e~p~~Gr~REf~Q~g~e 134 (496)
T Consensus 294 ----drVYEIGr~FRNEGIDlTHNPEFTTcEfY 322 (560)
T KOG1885 294 ----DRVYEIGRQFRNEGIDLTHNPEFTTCEFY 322 (560)
T ss_pred ----HHHHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf ----89999878763057665458774218999