HHsearch alignment for GI: 254780928 and conserved domain: PRK00413
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=8.2e-34 Score=238.73 Aligned_cols=367 Identities=19% Similarity=0.271 Sum_probs=243.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHH
Q ss_conf 79987658866899999999999999998598480165202288752026755433322168986999889998888389
Q gi|254780928|r 11 LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90 (496)
Q Consensus 11 ~P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~~ 90 (496)
T Consensus 256 ~~pGl~~w~P~G~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~Lw-~~SGHw~~Y~e~Mf~~~~~~~~~~~lKPMNCP~ 334 (639)
T PRK00413 256 EGPGLPFWHPKGWIIRNELEDYMRRRHLKAGYQEVNTPHILDRSLW-ETSGHWDHYRENMFPTMSDDGEDYALKPMNCPG 334 (639)
T ss_pred CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH-HHCCCHHHHCCCCCCCEECCCCEEEECCCCCCC
T ss_conf 6887646637689999999999999999869859836413468899-654742232254223240152103204668700
Q ss_pred HHHHHHHH-HHHCCCCHHHHHHHHHHCCCCCCC--C--CCCCCCCCCHHHHHCCCHHH-HH-HHHHHHHHHHHHCCCCCC
Q ss_conf 99999951-120554112331013330258764--4--42111110001210000245-78-899999999975188877
Q gi|254780928|r 91 LARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGP--G--RFRQFIQCDVDNVGSSAETA-DA-EMCMMMADTLEAVGIKRN 163 (496)
Q Consensus 91 ~aR~~~~~-~~~~~~p~k~yy~g~vfR~e~p~~--G--r~REf~Q~g~eiiG~~~~~~-Da-Eii~l~~~~l~~lgl~~~ 163 (496)
T Consensus 335 H~~if~~~~~SYRdLPlR~aEfg~~~R~E~SG~L~GL~RvR~FtqdDaHIFc~~dQi~~Ei~~~l~~~~~vy~~fGf~-- 412 (639)
T PRK00413 335 HILIFKSGLRSYRELPLRLAEFGTVHRYEKSGALHGLMRVRGFTQDDAHIFCTPEQIKDELLSVLDLILSVYKDFGLT-- 412 (639)
T ss_pred HHHHHHCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC--
T ss_conf 335644355355547556664113205677874456423300001584132478999999999999999999974998--
Q ss_pred CCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 71130366055899999832560356433455533322001289678998621016500355530489997789988874
Q gi|254780928|r 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243 (496)
Q Consensus 164 ~~~I~in~~~il~~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (496)
T Consensus 413 ~~~~~lStrp--e---k~~g~~e~W~~A----------------e~~L~~al~~~g~----~y~~~~GegAFYGPKI--- 464 (639)
T PRK00413 413 DYYLELSTRP--E---KRVGSDELWEKA----------------TEALREALEESGL----EYVENPGEGAFYGPKI--- 464 (639)
T ss_pred EEEEEEECCC--C---CCCCCHHHHHHH----------------HHHHHHHHHHCCC----CEEECCCCCCEECCEE---
T ss_conf 0389996475--1---135888999999----------------9999999997499----8087888611110166---
Q ss_pred HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC--CCCCCCEEEEEEECCCCCCCCCC
Q ss_conf 0478568899899860357325888999999999987508884430011010012--21234124899854666776766
Q gi|254780928|r 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG--LEYYTGCVYEAILGFPVMNEKQK 321 (496)
Q Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvRg--LdYYTG~vFE~~~~~~~~~~~~~ 321 (496)
T Consensus 465 -----D-------------~~~~DalgR---------~wq~--~TiQlDf~lPerF~l~Y-~~----------~dg~~~~ 504 (639)
T PRK00413 465 -----D-------------VQLKDAIGR---------TWQC--GTIQLDFNLPERFDLEY-IA----------ADGEKHR 504 (639)
T ss_pred -----E-------------EEEECCCCC---------EEEC--CHHHHHHCCHHHCCCEE-EC----------CCCCCCC
T ss_conf -----7-------------785144687---------1320--02332222454248889-98----------8898163
Q ss_pred CCCE-EEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHC-CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
Q ss_conf 6310-1100323235521112345677421331101689999973-6877665557714899826976899999999999
Q gi|254780928|r 322 PVVF-GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399 (496)
Q Consensus 322 ~~~~-~aI~~GGRYD~L~~~f~~~~~pavGfaigverl~~~l~~~-~~~~~~~~~~~~v~V~~~~~~~~~~~~~~~ia~~ 399 (496)
T Consensus 505 PVmIHRAi--------------------~G---S~ERfiaiLiEh~~G~~P~WLaP~Qv~IipV--~~~~~~ya~~v~~~ 559 (639)
T PRK00413 505 PVMIHRAI--------------------FG---SIERFIGILIEHYAGAFPLWLAPVQVVVIPI--TDEHADYAKEVAKA 559 (639)
T ss_pred EEEEEECC--------------------CC---CHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC--CHHHHHHHHHHHHH
T ss_conf 08999525--------------------56---5899999999980898873657615899961--84789999999999
Q ss_pred HHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCEEECHH
Q ss_conf 99879839997189999889999998779989999887287488189978788836433112014432023351030799
Q gi|254780928|r 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479 (496)
Q Consensus 400 Lr~~Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~~~~~q~~v~~~ 479 (496)
T Consensus 560 l~~~giRv~vD~~-~e~l~~KIR~a~~~kiPy~~VvGdkE~~~~~VsvR~r~~~~------------------~~~~~~~ 620 (639)
T PRK00413 560 LRDAGIRVEVDLR-NEKIGYKIREAQLQKVPYMLVVGDKEVEAGTVSVRRRGGGD------------------LGTMPVD 620 (639)
T ss_pred HHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEEEHHHHHCCEEEEEECCCCC------------------CCEEEHH
T ss_conf 9978988999789-98575999998653799899980036535958999778972------------------4656899
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999864
Q gi|254780928|r 480 ELVSTVKKILQEN 492 (496)
Q Consensus 480 ~l~~~~~~~l~~~ 492 (496)
T Consensus 621 efi~~l~~ei~~r 633 (639)
T PRK00413 621 EFVEKIKEEIARR 633 (639)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999875